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The map label for this gene is yrbE [C]

Identifier: 118581609

GI number: 118581609

Start: 3525868

End: 3526638

Strand: Direct

Name: yrbE [C]

Synonym: Ppro_3208

Alternate gene names: 118581609

Gene position: 3525868-3526638 (Clockwise)

Preceding gene: 118581608

Following gene: 118581610

Centisome position: 87.97

GC content: 62.26

Gene sequence:

>771_bases
ATGAACATCATCGTCGTCGACAGGGTGCTGATCCGCTTCTTCCACGGATTGCAGAGCTATTTCAGCCTGGGAGGGGGGAT
GCTGGCACGCATCTTCCGGCGCCCCTCCTACTACCGTGAATTCGTGGTGCAGTTCGACAAACTGGGCTTCGCCTCCCTGT
TCATCTGCCTTTTGACCGGCCTTTTCTCCGGCATGGTCATGGCGCTGCAGGCCCTGATCCAGCTCAAACCGTTCGCCGCC
ACCAGCTATGTGGGCGGCATGGTTGCGGCCACCATGATCAAGGAACTGGGGCCGGTGCTGGCATCGCTGATGGTGGCCGG
CAGGGGCGGGTCGGCCATCACCGCCGAACTGGGTACCATGGTTGTCACCGAACAGGTGGATGCCATGCGGGTGGAGGGGA
CCGACATCATCCAGCGCCTGGCAACCCCGCGCCTGAAGGCCATGCTGCTGGCCATGCCGCTTTTGACGGTGGCCACGGAT
GTTATCTCGCTGGTGGGGGGATACGTCATGTCGGCCGGGTACGGCATCAACCCGATCATGTACGTGAGCGGCCTCTCCCA
GTTCATGGTCTTCCAGGACCTGATCGAGGGGCTGGTCAAACCGCTCTTCTTCGGGCTGATCATCGCCGTCACCGGCTGCT
ATGTCGGCCTGAACACCCGCGGCGGCGCCGAGGGTGTGGGGGCGGCGGCCAAGCAGGCGGTGGTGCTCTCATCGGTCACC
ATCCTGGTGTCAGACTTCTTCATCTCCAAGATCTTCGTGGCGTTCAGGTAA

Upstream 100 bases:

>100_bases
CCGCGACGACCTGGAAGACATCCCGGACAACGTGCGCAACGATCTGGAATTCATCTTCATCAACGAGGCGCGCGAGGCAC
TGGAAGCCGCGCTCTGATCC

Downstream 100 bases:

>100_bases
CCGTTTTTCCCGGATTACAAGGAGGCTTGAGACCATGACCCTTCCCGCGGAGGAAAAAACGCAGCGCTTTTCGTGGAACG
AGTACAAGCAGTGGCCGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNIIVVDRVLIRFFHGLQSYFSLGGGMLARIFRRPSYYREFVVQFDKLGFASLFICLLTGLFSGMVMALQALIQLKPFAA
TSYVGGMVAATMIKELGPVLASLMVAGRGGSAITAELGTMVVTEQVDAMRVEGTDIIQRLATPRLKAMLLAMPLLTVATD
VISLVGGYVMSAGYGINPIMYVSGLSQFMVFQDLIEGLVKPLFFGLIIAVTGCYVGLNTRGGAEGVGAAAKQAVVLSSVT
ILVSDFFISKIFVAFR

Sequences:

>Translated_256_residues
MNIIVVDRVLIRFFHGLQSYFSLGGGMLARIFRRPSYYREFVVQFDKLGFASLFICLLTGLFSGMVMALQALIQLKPFAA
TSYVGGMVAATMIKELGPVLASLMVAGRGGSAITAELGTMVVTEQVDAMRVEGTDIIQRLATPRLKAMLLAMPLLTVATD
VISLVGGYVMSAGYGINPIMYVSGLSQFMVFQDLIEGLVKPLFFGLIIAVTGCYVGLNTRGGAEGVGAAAKQAVVLSSVT
ILVSDFFISKIFVAFR
>Mature_256_residues
MNIIVVDRVLIRFFHGLQSYFSLGGGMLARIFRRPSYYREFVVQFDKLGFASLFICLLTGLFSGMVMALQALIQLKPFAA
TSYVGGMVAATMIKELGPVLASLMVAGRGGSAITAELGTMVVTEQVDAMRVEGTDIIQRLATPRLKAMLLAMPLLTVATD
VISLVGGYVMSAGYGINPIMYVSGLSQFMVFQDLIEGLVKPLFFGLIIAVTGCYVGLNTRGGAEGVGAAAKQAVVLSSVT
ILVSDFFISKIFVAFR

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=223, Percent_Identity=31.390134529148, Blast_Score=120, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 27424; Mature: 27424

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA