| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581603
Identifier: 118581603
GI number: 118581603
Start: 3519206
End: 3520762
Strand: Reverse
Name: 118581603
Synonym: Ppro_3202
Alternate gene names: NA
Gene position: 3520762-3519206 (Counterclockwise)
Preceding gene: 118581628
Following gene: 118581602
Centisome position: 87.84
GC content: 66.92
Gene sequence:
>1557_bases GTGCCCTACACACCCCGCCTGTTCGCCATCGGTGACATCAACGCCTTCTTCGGCCTGATGCTGGACAATCTCAGCGACCT GGTGATCATGGCGGCCATCCTTACCGGCGTCTTCGGCATGCCACGCGACCTGGTGCTGGGCAGGATGCTGCCGGGAAGCG CCATGGGGGTGCTGGCCGGGGACCTGCTCTACTCCTGGATGGCCTGGCGCCTGGCCAAGCGCAGCGGGCGAGACGACGTG ACCGCCATGCCCCTGGGGCTGGATACCCCCTCTTCCTTCGGCATGGCCTTCGGCGTCATCGGCCCCTGCTACCTGGCCAC GAAGGATCCCCTCCTGACCTGGCAGGTAGGCATGGCGGTGATCGTCATGATGGGGCTCTTCAAGATAGTTGCCTCCTTCT TTGGACCTCTCCTGCGGCGATTGATCCCCCGGGCCGGCCTGCTGGGGAGCATCGCTGCGGTGGCGCTTTTGCTCATCGCC TACCTGCCGTTCCTCAAGCTGTTCGCCTCGCCGGTGGTCGGCTTCCTCTCACTGGGGATCGTCTTCATCTCGCTTTTGGC CCGCTTCAGGCTGCCCCTGCGCCTGCCCGGCGCCCTGGCCGGCATCCTCTGCGGCGTTGTCGCCCACTACCTGCTGGGCG CCTTCGGCCTGCTTCCCCACGGGATGGAGGCTCTGCCTCCCCCGCCGGAACTGGCCTTCCACCTGCCGCTCCCCACGTTT GAATTCCTGGCCGGCATGACCCGCGGACTGACCTACCTGCCGCTGGCTATCCCCTTTGCCCTGGCCACGGTGGTGGGCGG GGTGGATGTGACCGAGAGCGCGGCGGTGGCCGGCGACGACTACAACACCCGCGACATCCTGCTGGTGGAGGGATTCGCCA CCCTTGTGGCCGGCATGTGCGGCGGGGTGATCCAGTCCTGCCCTTACATCGGCCACCCGGCCTACAAGGAGATGGGGGGA CGGGCCGGCTACACCATTGCCACGGCGCTCTTCATCGGCCTGGGGGCGGTGTGCGGCTACCTCTCCTTCTTCGTGGGGCT CCTTCCCGAGGCTGCCGTGGCGCCGATCCTGATCTTCATCGGCATCGAGATCATGGCCCAGGCCTTCGAGGCCACGCCGC GCCAGCATTTCCGGGCCGTTGCCATCTCCTTCATCCCGGTGGTGGCCTGCCTGGTCTCCATCCAGTTCAACCAGCTCTTG TCCGGATTGGGGAAGAGCGTCTCCGATTTGTCCGGCGAGCTGCTGGTCAGCTACACCGCCACCACGGTCCTGGGCAACGG CTTCATCGTCACCTCGCTCTTGTGGGGGGCGGCCTTCGCCCATGTGCTGGACCATTGTCCCGGCCGGGCGGCCGGGTATC TGCTGGTCTGCGCCCTGCTTACCCTGTGTGGCGCCATCCATTCGCCGCTCCCCAGCGGCGCGCTCTTCTCGCCGCTGCAG CCGCCATCGCCCCTGGTCTGGCATCTGGCAGCCGGGTACCTCCTCATGGCCCTGACCTTTGCCCTCCTGGATGCAGGCAG GGGCAGGCAAAAAGCATGGCAGGCCGGTCGCGGGTAA
Upstream 100 bases:
>100_bases TTGGCATAGCCTCATGTAGTTGCCCCATCATCTGCCCGATTTTATATTGCATTCACGCCTCCCCTATGGCACGTTTCCCC CACTTCCGGAGGAACCGCCC
Downstream 100 bases:
>100_bases CGCATCGGAATAGCGTCAGAAGTCCGTCTGCTCATGGGTGCCTGTCCGGTATGCCGGATTCATCCGTATCCTTGTCATCC CTTGGGGGTATGGCACACTT
Product: MFS transporter xanthine/uracil permease
Products: NA
Alternate protein names: Permease; MFS Transporter Xanthine/Uracil Permease; Permease Subfamily Putative; Sulphate Transporter; Regulator; Transcriptional Regulator; Permease Subfamily
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MPYTPRLFAIGDINAFFGLMLDNLSDLVIMAAILTGVFGMPRDLVLGRMLPGSAMGVLAGDLLYSWMAWRLAKRSGRDDV TAMPLGLDTPSSFGMAFGVIGPCYLATKDPLLTWQVGMAVIVMMGLFKIVASFFGPLLRRLIPRAGLLGSIAAVALLLIA YLPFLKLFASPVVGFLSLGIVFISLLARFRLPLRLPGALAGILCGVVAHYLLGAFGLLPHGMEALPPPPELAFHLPLPTF EFLAGMTRGLTYLPLAIPFALATVVGGVDVTESAAVAGDDYNTRDILLVEGFATLVAGMCGGVIQSCPYIGHPAYKEMGG RAGYTIATALFIGLGAVCGYLSFFVGLLPEAAVAPILIFIGIEIMAQAFEATPRQHFRAVAISFIPVVACLVSIQFNQLL SGLGKSVSDLSGELLVSYTATTVLGNGFIVTSLLWGAAFAHVLDHCPGRAAGYLLVCALLTLCGAIHSPLPSGALFSPLQ PPSPLVWHLAAGYLLMALTFALLDAGRGRQKAWQAGRG
Sequences:
>Translated_518_residues MPYTPRLFAIGDINAFFGLMLDNLSDLVIMAAILTGVFGMPRDLVLGRMLPGSAMGVLAGDLLYSWMAWRLAKRSGRDDV TAMPLGLDTPSSFGMAFGVIGPCYLATKDPLLTWQVGMAVIVMMGLFKIVASFFGPLLRRLIPRAGLLGSIAAVALLLIA YLPFLKLFASPVVGFLSLGIVFISLLARFRLPLRLPGALAGILCGVVAHYLLGAFGLLPHGMEALPPPPELAFHLPLPTF EFLAGMTRGLTYLPLAIPFALATVVGGVDVTESAAVAGDDYNTRDILLVEGFATLVAGMCGGVIQSCPYIGHPAYKEMGG RAGYTIATALFIGLGAVCGYLSFFVGLLPEAAVAPILIFIGIEIMAQAFEATPRQHFRAVAISFIPVVACLVSIQFNQLL SGLGKSVSDLSGELLVSYTATTVLGNGFIVTSLLWGAAFAHVLDHCPGRAAGYLLVCALLTLCGAIHSPLPSGALFSPLQ PPSPLVWHLAAGYLLMALTFALLDAGRGRQKAWQAGRG >Mature_517_residues PYTPRLFAIGDINAFFGLMLDNLSDLVIMAAILTGVFGMPRDLVLGRMLPGSAMGVLAGDLLYSWMAWRLAKRSGRDDVT AMPLGLDTPSSFGMAFGVIGPCYLATKDPLLTWQVGMAVIVMMGLFKIVASFFGPLLRRLIPRAGLLGSIAAVALLLIAY LPFLKLFASPVVGFLSLGIVFISLLARFRLPLRLPGALAGILCGVVAHYLLGAFGLLPHGMEALPPPPELAFHLPLPTFE FLAGMTRGLTYLPLAIPFALATVVGGVDVTESAAVAGDDYNTRDILLVEGFATLVAGMCGGVIQSCPYIGHPAYKEMGGR AGYTIATALFIGLGAVCGYLSFFVGLLPEAAVAPILIFIGIEIMAQAFEATPRQHFRAVAISFIPVVACLVSIQFNQLLS GLGKSVSDLSGELLVSYTATTVLGNGFIVTSLLWGAAFAHVLDHCPGRAAGYLLVCALLTLCGAIHSPLPSGALFSPLQP PSPLVWHLAAGYLLMALTFALLDAGRGRQKAWQAGRG
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54552; Mature: 54421
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYTPRLFAIGDINAFFGLMLDNLSDLVIMAAILTGVFGMPRDLVLGRMLPGSAMGVLAG CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHH DLLYSWMAWRLAKRSGRDDVTAMPLGLDTPSSFGMAFGVIGPCYLATKDPLLTWQVGMAV HHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IVMMGLFKIVASFFGPLLRRLIPRAGLLGSIAAVALLLIAYLPFLKLFASPVVGFLSLGI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFISLLARFRLPLRLPGALAGILCGVVAHYLLGAFGLLPHGMEALPPPPELAFHLPLPTF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHH EFLAGMTRGLTYLPLAIPFALATVVGGVDVTESAAVAGDDYNTRDILLVEGFATLVAGMC HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHH GGVIQSCPYIGHPAYKEMGGRAGYTIATALFIGLGAVCGYLSFFVGLLPEAAVAPILIFI HHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GIEIMAQAFEATPRQHFRAVAISFIPVVACLVSIQFNQLLSGLGKSVSDLSGELLVSYTA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHH TTVLGNGFIVTSLLWGAAFAHVLDHCPGRAAGYLLVCALLTLCGAIHSPLPSGALFSPLQ HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PPSPLVWHLAAGYLLMALTFALLDAGRGRQKAWQAGRG CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC >Mature Secondary Structure PYTPRLFAIGDINAFFGLMLDNLSDLVIMAAILTGVFGMPRDLVLGRMLPGSAMGVLAG CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHH DLLYSWMAWRLAKRSGRDDVTAMPLGLDTPSSFGMAFGVIGPCYLATKDPLLTWQVGMAV HHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH IVMMGLFKIVASFFGPLLRRLIPRAGLLGSIAAVALLLIAYLPFLKLFASPVVGFLSLGI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFISLLARFRLPLRLPGALAGILCGVVAHYLLGAFGLLPHGMEALPPPPELAFHLPLPTF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHH EFLAGMTRGLTYLPLAIPFALATVVGGVDVTESAAVAGDDYNTRDILLVEGFATLVAGMC HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHH GGVIQSCPYIGHPAYKEMGGRAGYTIATALFIGLGAVCGYLSFFVGLLPEAAVAPILIFI HHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GIEIMAQAFEATPRQHFRAVAISFIPVVACLVSIQFNQLLSGLGKSVSDLSGELLVSYTA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHH TTVLGNGFIVTSLLWGAAFAHVLDHCPGRAAGYLLVCALLTLCGAIHSPLPSGALFSPLQ HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PPSPLVWHLAAGYLLMALTFALLDAGRGRQKAWQAGRG CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA