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The map label for this gene is ybjT [H]

Identifier: 118581602

GI number: 118581602

Start: 3518193

End: 3519098

Strand: Reverse

Name: ybjT [H]

Synonym: Ppro_3201

Alternate gene names: 118581602

Gene position: 3519098-3518193 (Counterclockwise)

Preceding gene: 118581603

Following gene: 118581601

Centisome position: 87.8

GC content: 65.12

Gene sequence:

>906_bases
ATGAAAAAAACAACGGGGAAAATTCTGGTTACCGGCGCGACCGGCTTCATCGGCAGGCGGCTGACAGTGGCGCTGGTGCG
ACAGGGGTACAGCGTGCGCTGCATGCTGCGCAGGGATGCTCCAGACCTTCCCCGGGAGGCGGAGCAGGTGCGGGGCGACA
TGCTGGAGCCTATGACCCTTGACGCCGCCCTGGCGGGAATCGACACCGCCTATTACCTGGTGCACTCCATGACCGCCGGC
AGGAGCGGCTTCGAACAGCGCGATCGCACGGCGGCCGAAAATTTCGTGGAAGCGGCCAGTCGGGCCGGGGTGCGGCGGGT
GATCTACCTGGGAGGGTTGGGCGAGACCGGTGACGAGCTGTCCGAACACCTGAGGAGCCGCCTGGAGGTGGCCCGGATCC
TGGCCAAGGGAACGTTTGCCACCACCTTTCTCAGGGCAGCGGTGATCATCGGCGCCTCCGGTGCATCCTTCGAGATGGTG
CATTATCTGGTGAAGCGCCTGCCGGTGATGATCACGCCGCGCTGGGTGACGACCCGCTGCCAGCCCATCGCCGTGGACGA
CGTGATCGCCTATCTCACCGGCTGCCTGGAGGACGAACGGACCGCCGGCAAGACCTTTGACATCGGCGGTCCGGAGGTGC
TGACCTACCGGGAGATGATGGAGCGCTTCGCCCGCATCCTGGGGAAGCGGCTGTACATCCTGGCGGTGCCGGTGCTGACC
CCCAAGCTGTCGTCCTACTGGGTCGCCCTGATAACCCCGGTGCCGCCGTCGGTCTCCATGCCGCTCATCGAGGGGTTGAA
GAACGAGGTCGTTTGCCGCGAGAACGCAATCCGCCAGATTCTGGCGATCCCGCTCACCACCTATGACAAGGCTGTGGCCA
GGGCGCTGGCGGAGTTGAAGTCGTAG

Upstream 100 bases:

>100_bases
GAATAGCGTCAGAAGTCCGTCTGCTCATGGGTGCCTGTCCGGTATGCCGGATTCATCCGTATCCTTGTCATCCCTTGGGG
GTATGGCACACTTGTCTTCT

Downstream 100 bases:

>100_bases
GGGCGCAACATTCGGTTTCACGTCCCTTCCCTTTCAGGGGGAGGGGGCTGTTTCGGTTACACGGTTTTTCTCACCACCGC
CCGCCGCTGATGGCGGGCTG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKKTTGKILVTGATGFIGRRLTVALVRQGYSVRCMLRRDAPDLPREAEQVRGDMLEPMTLDAALAGIDTAYYLVHSMTAG
RSGFEQRDRTAAENFVEAASRAGVRRVIYLGGLGETGDELSEHLRSRLEVARILAKGTFATTFLRAAVIIGASGASFEMV
HYLVKRLPVMITPRWVTTRCQPIAVDDVIAYLTGCLEDERTAGKTFDIGGPEVLTYREMMERFARILGKRLYILAVPVLT
PKLSSYWVALITPVPPSVSMPLIEGLKNEVVCRENAIRQILAIPLTTYDKAVARALAELKS

Sequences:

>Translated_301_residues
MKKTTGKILVTGATGFIGRRLTVALVRQGYSVRCMLRRDAPDLPREAEQVRGDMLEPMTLDAALAGIDTAYYLVHSMTAG
RSGFEQRDRTAAENFVEAASRAGVRRVIYLGGLGETGDELSEHLRSRLEVARILAKGTFATTFLRAAVIIGASGASFEMV
HYLVKRLPVMITPRWVTTRCQPIAVDDVIAYLTGCLEDERTAGKTFDIGGPEVLTYREMMERFARILGKRLYILAVPVLT
PKLSSYWVALITPVPPSVSMPLIEGLKNEVVCRENAIRQILAIPLTTYDKAVARALAELKS
>Mature_301_residues
MKKTTGKILVTGATGFIGRRLTVALVRQGYSVRCMLRRDAPDLPREAEQVRGDMLEPMTLDAALAGIDTAYYLVHSMTAG
RSGFEQRDRTAAENFVEAASRAGVRRVIYLGGLGETGDELSEHLRSRLEVARILAKGTFATTFLRAAVIIGASGASFEMV
HYLVKRLPVMITPRWVTTRCQPIAVDDVIAYLTGCLEDERTAGKTFDIGGPEVLTYREMMERFARILGKRLYILAVPVLT
PKLSSYWVALITPVPPSVSMPLIEGLKNEVVCRENAIRQILAIPLTTYDKAVARALAELKS

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=295, Percent_Identity=35.9322033898305, Blast_Score=188, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33146; Mature: 33146

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTGKILVTGATGFIGRRLTVALVRQGYSVRCMLRRDAPDLPREAEQVRGDMLEPMTL
CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHH
DAALAGIDTAYYLVHSMTAGRSGFEQRDRTAAENFVEAASRAGVRRVIYLGGLGETGDEL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
SEHLRSRLEVARILAKGTFATTFLRAAVIIGASGASFEMVHYLVKRLPVMITPRWVTTRC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCCCCCCC
QPIAVDDVIAYLTGCLEDERTAGKTFDIGGPEVLTYREMMERFARILGKRLYILAVPVLT
CCCHHHHHHHHHHHHHCCHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHC
PKLSSYWVALITPVPPSVSMPLIEGLKNEVVCRENAIRQILAIPLTTYDKAVARALAELK
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
S
C
>Mature Secondary Structure
MKKTTGKILVTGATGFIGRRLTVALVRQGYSVRCMLRRDAPDLPREAEQVRGDMLEPMTL
CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHH
DAALAGIDTAYYLVHSMTAGRSGFEQRDRTAAENFVEAASRAGVRRVIYLGGLGETGDEL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
SEHLRSRLEVARILAKGTFATTFLRAAVIIGASGASFEMVHYLVKRLPVMITPRWVTTRC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEECCCCCCCCC
QPIAVDDVIAYLTGCLEDERTAGKTFDIGGPEVLTYREMMERFARILGKRLYILAVPVLT
CCCHHHHHHHHHHHHHCCHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHC
PKLSSYWVALITPVPPSVSMPLIEGLKNEVVCRENAIRQILAIPLTTYDKAVARALAELK
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]