Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is yajQ [C]

Identifier: 118581496

GI number: 118581496

Start: 3382580

End: 3383065

Strand: Direct

Name: yajQ [C]

Synonym: Ppro_3093

Alternate gene names: 118581496

Gene position: 3382580-3383065 (Clockwise)

Preceding gene: 118581495

Following gene: 118581497

Centisome position: 84.4

GC content: 57.0

Gene sequence:

>486_bases
ATGCCGTCATTCGACATCGTTTCAAAAGTCGACATGCAGGAGGTGGACAACGCCGTCAACCAGGCGGTCAAGGAGATCAG
TCAACGCTACGACTTCAAAGGCTCCAAGAGCGAGATCAGCCAGGAGAAAGATGCGGTCAGGGTGCTGGCCGATGACGACT
TCAAGCTCAAGGCGGTCATTGACGTCTTGCAGTCCAAGTTCCTCAAGCGCAACATCTCCATCAAGGCCCTGCAGTACGGC
AAGGTCGAACCGGCCTCGGGCGGTATGGTGCGCCAACTGATCTCGGTCCAGCAGGGGATCTCCAAGGAGAAGGGCAAGGA
GATCATCGCCGTCATCAAGGAGTCCAAGCTCAAGGTACAGGCCCAGATTCAGGACGACCAGGTGCGGGTCACCGGCAAGA
ACCGCGACGATCTGCAGGGCGCCATCCAACTGCTCAAGGGCAAGGATCTGGATATCGAGATGCAGTTCGTGAACTTCAGG
GAGTGA

Upstream 100 bases:

>100_bases
ACGAACCAGGAACAGAGGGCCTGGCTGCGGCTTCCGAACTCTGTAGCCAGGCTTCTGCCTTTGCAACGATTTTCACATTT
CCCATGGGAGGTTTTCAGCT

Downstream 100 bases:

>100_bases
TGTAGTCCCGAGCCGCTATCCGGGGAGAGGGCCGCCCATTGCCTGGGCGGCCCTTTTTCTCGAACCACACACAGGCAGCT
TTTCATGGCACAGCCAGTTC

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPSFDIVSKVDMQEVDNAVNQAVKEISQRYDFKGSKSEISQEKDAVRVLADDDFKLKAVIDVLQSKFLKRNISIKALQYG
KVEPASGGMVRQLISVQQGISKEKGKEIIAVIKESKLKVQAQIQDDQVRVTGKNRDDLQGAIQLLKGKDLDIEMQFVNFR
E

Sequences:

>Translated_161_residues
MPSFDIVSKVDMQEVDNAVNQAVKEISQRYDFKGSKSEISQEKDAVRVLADDDFKLKAVIDVLQSKFLKRNISIKALQYG
KVEPASGGMVRQLISVQQGISKEKGKEIIAVIKESKLKVQAQIQDDQVRVTGKNRDDLQGAIQLLKGKDLDIEMQFVNFR
E
>Mature_160_residues
PSFDIVSKVDMQEVDNAVNQAVKEISQRYDFKGSKSEISQEKDAVRVLADDDFKLKAVIDVLQSKFLKRNISIKALQYGK
VEPASGGMVRQLISVQQGISKEKGKEIIAVIKESKLKVQAQIQDDQVRVTGKNRDDLQGAIQLLKGKDLDIEMQFVNFRE

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family

Homologues:

Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=43.558282208589, Blast_Score=133, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3093_PELPD (A1ATL8)

Other databases:

- EMBL:   CP000482
- RefSeq:   YP_902746.1
- ProteinModelPortal:   A1ATL8
- SMR:   A1ATL8
- STRING:   A1ATL8
- GeneID:   4573966
- GenomeReviews:   CP000482_GR
- KEGG:   ppd:Ppro_3093
- eggNOG:   COG1666
- HOGENOM:   HBG290634
- OMA:   LQFTNYR
- PhylomeDB:   A1ATL8
- ProtClustDB:   PRK05412
- HAMAP:   MF_00632
- InterPro:   IPR007551

Pfam domain/function: PF04461 DUF520

EC number: NA

Molecular weight: Translated: 18126; Mature: 17995

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFDIVSKVDMQEVDNAVNQAVKEISQRYDFKGSKSEISQEKDAVRVLADDDFKLKAVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCHHHHHH
DVLQSKFLKRNISIKALQYGKVEPASGGMVRQLISVQQGISKEKGKEIIAVIKESKLKVQ
HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCHHHHHHHHHCCEEEE
AQIQDDQVRVTGKNRDDLQGAIQLLKGKDLDIEMQFVNFRE
EEECCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure 
PSFDIVSKVDMQEVDNAVNQAVKEISQRYDFKGSKSEISQEKDAVRVLADDDFKLKAVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCHHHHHH
DVLQSKFLKRNISIKALQYGKVEPASGGMVRQLISVQQGISKEKGKEIIAVIKESKLKVQ
HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCHHHHHHHHHCCEEEE
AQIQDDQVRVTGKNRDDLQGAIQLLKGKDLDIEMQFVNFRE
EEECCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA