| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is yajQ [C]
Identifier: 118581496
GI number: 118581496
Start: 3382580
End: 3383065
Strand: Direct
Name: yajQ [C]
Synonym: Ppro_3093
Alternate gene names: 118581496
Gene position: 3382580-3383065 (Clockwise)
Preceding gene: 118581495
Following gene: 118581497
Centisome position: 84.4
GC content: 57.0
Gene sequence:
>486_bases ATGCCGTCATTCGACATCGTTTCAAAAGTCGACATGCAGGAGGTGGACAACGCCGTCAACCAGGCGGTCAAGGAGATCAG TCAACGCTACGACTTCAAAGGCTCCAAGAGCGAGATCAGCCAGGAGAAAGATGCGGTCAGGGTGCTGGCCGATGACGACT TCAAGCTCAAGGCGGTCATTGACGTCTTGCAGTCCAAGTTCCTCAAGCGCAACATCTCCATCAAGGCCCTGCAGTACGGC AAGGTCGAACCGGCCTCGGGCGGTATGGTGCGCCAACTGATCTCGGTCCAGCAGGGGATCTCCAAGGAGAAGGGCAAGGA GATCATCGCCGTCATCAAGGAGTCCAAGCTCAAGGTACAGGCCCAGATTCAGGACGACCAGGTGCGGGTCACCGGCAAGA ACCGCGACGATCTGCAGGGCGCCATCCAACTGCTCAAGGGCAAGGATCTGGATATCGAGATGCAGTTCGTGAACTTCAGG GAGTGA
Upstream 100 bases:
>100_bases ACGAACCAGGAACAGAGGGCCTGGCTGCGGCTTCCGAACTCTGTAGCCAGGCTTCTGCCTTTGCAACGATTTTCACATTT CCCATGGGAGGTTTTCAGCT
Downstream 100 bases:
>100_bases TGTAGTCCCGAGCCGCTATCCGGGGAGAGGGCCGCCCATTGCCTGGGCGGCCCTTTTTCTCGAACCACACACAGGCAGCT TTTCATGGCACAGCCAGTTC
Product: putative nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPSFDIVSKVDMQEVDNAVNQAVKEISQRYDFKGSKSEISQEKDAVRVLADDDFKLKAVIDVLQSKFLKRNISIKALQYG KVEPASGGMVRQLISVQQGISKEKGKEIIAVIKESKLKVQAQIQDDQVRVTGKNRDDLQGAIQLLKGKDLDIEMQFVNFR E
Sequences:
>Translated_161_residues MPSFDIVSKVDMQEVDNAVNQAVKEISQRYDFKGSKSEISQEKDAVRVLADDDFKLKAVIDVLQSKFLKRNISIKALQYG KVEPASGGMVRQLISVQQGISKEKGKEIIAVIKESKLKVQAQIQDDQVRVTGKNRDDLQGAIQLLKGKDLDIEMQFVNFR E >Mature_160_residues PSFDIVSKVDMQEVDNAVNQAVKEISQRYDFKGSKSEISQEKDAVRVLADDDFKLKAVIDVLQSKFLKRNISIKALQYGK VEPASGGMVRQLISVQQGISKEKGKEIIAVIKESKLKVQAQIQDDQVRVTGKNRDDLQGAIQLLKGKDLDIEMQFVNFRE
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family
Homologues:
Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=43.558282208589, Blast_Score=133, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3093_PELPD (A1ATL8)
Other databases:
- EMBL: CP000482 - RefSeq: YP_902746.1 - ProteinModelPortal: A1ATL8 - SMR: A1ATL8 - STRING: A1ATL8 - GeneID: 4573966 - GenomeReviews: CP000482_GR - KEGG: ppd:Ppro_3093 - eggNOG: COG1666 - HOGENOM: HBG290634 - OMA: LQFTNYR - PhylomeDB: A1ATL8 - ProtClustDB: PRK05412 - HAMAP: MF_00632 - InterPro: IPR007551
Pfam domain/function: PF04461 DUF520
EC number: NA
Molecular weight: Translated: 18126; Mature: 17995
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFDIVSKVDMQEVDNAVNQAVKEISQRYDFKGSKSEISQEKDAVRVLADDDFKLKAVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCHHHHHH DVLQSKFLKRNISIKALQYGKVEPASGGMVRQLISVQQGISKEKGKEIIAVIKESKLKVQ HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCHHHHHHHHHCCEEEE AQIQDDQVRVTGKNRDDLQGAIQLLKGKDLDIEMQFVNFRE EEECCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC >Mature Secondary Structure PSFDIVSKVDMQEVDNAVNQAVKEISQRYDFKGSKSEISQEKDAVRVLADDDFKLKAVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCCCHHHHHH DVLQSKFLKRNISIKALQYGKVEPASGGMVRQLISVQQGISKEKGKEIIAVIKESKLKVQ HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCHHHHHHHHHCCEEEE AQIQDDQVRVTGKNRDDLQGAIQLLKGKDLDIEMQFVNFRE EEECCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA