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The map label for this gene is ybhR [H]

Identifier: 118581312

GI number: 118581312

Start: 3180911

End: 3182041

Strand: Direct

Name: ybhR [H]

Synonym: Ppro_2907

Alternate gene names: 118581312

Gene position: 3180911-3182041 (Clockwise)

Preceding gene: 118581311

Following gene: 118581313

Centisome position: 79.36

GC content: 61.89

Gene sequence:

>1131_bases
ATGTTGGAACGTCTCCGCGCCATGCTGATCAAGGAGTTCATCCAGGTCTTCCGCGACCCGCGCATGAGGATCGTGCTGTT
CGTGCTGCCGGCCCTGCAGACGGTGATCTTCGGCTATGCGGTGGACATGGACGTGAAAAACATCCCCACGGCAATCATGG
ACCGGGACAACAGCAGCGAGAGTAGGGAACTGACCGACATCATCTCCTCCTCCGGGCATTTCAGGATCACCCGGCGCATC
GACAACGACAGCCAGGCCCGCAACCTGCTGGACCGCGGGACGGTCAGGGTAGTGCTGACCATCGAGCACGGCTTCAGCCA
GCAGCTGGCACGGGGGGAGAACGTGACGGTGCAGGCGCTCATGGACGGCTCCGACTCCAACACCGCCGGAGTGGTCATGG
GCTATCTGGGGCGGTTCTCCAACGACTACAACAGCCGCCTGCAGCTCCGCTTCATCCAACGACACCAGGGAGGCACACTC
CGCACCGGCCGTGTGGAACTGGCCAGCCGCGCCTGGTTCAACGAGAACCTGGAGAGCCCCCCCTTCTACGTTCCTGCGGT
GATCACCAACATCCTGTTCGTGATCACCATGCTGCTCTCATCCCTGGCCATCGTGCGGGAAAAGGAAATCGGCACCATGG
AGCAGGTCATCGTCACCCCCATCCGCAAGCGGGAATTCATCCTGGGCAAGACGCTCCCCTTCGTACTGATCGGCTACATC
GACGTGGCCCTGATCAGCCTGGTGGGCACGCTGGTGTTCCACGTCCCGGTGCGGGGCAGCCTGGGGCTGCTCTTCCTGGC
CACCACCCTTTTTCTGATGAGCGCCCTGGGGATCGGGCTTCTGATCTCCACCGTCAGCCGGACCCAGCAACAGGCCATGA
TGAGCGCCTTCTTCGTCATCTTCCCGGCCATGCTTCTCTCCGGCTTTGCCTTTCCCATCGAGAACATGCCGTTAGCGGTT
CAATGGCTGACCCTGGCCAACCCGCTGCGCTACTACATGGTGATCGTCAGGGGGATTTTCCTTAAGGGGGTGGGATTGAC
CATCCTCTGGCCGCACATGGCGGCGCTGACCGTCATCGGGCTGGCGGTGCTGCTGGTAGCCGTGGAGCGCTTCCGGAAAA
CAATCGCCTAA

Upstream 100 bases:

>100_bases
TGATCGTTACGCTGCTGGCGGTGGGGAAGTTCAGGAAAAGCATCGACTAGCCAGAGATGACGCACCGGCTCCGTGCGACC
TCCGGCAAAAGGATTGTAGA

Downstream 100 bases:

>100_bases
CTTTTTCGCCTCCTCACAGCCGCCATGGTCAGAAAAGCATCTGCCACCCAGGGCTTCCCCCAGCCCCCAGACATTCATTA
AAATGTAGTTTACAGGACGG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MLERLRAMLIKEFIQVFRDPRMRIVLFVLPALQTVIFGYAVDMDVKNIPTAIMDRDNSSESRELTDIISSSGHFRITRRI
DNDSQARNLLDRGTVRVVLTIEHGFSQQLARGENVTVQALMDGSDSNTAGVVMGYLGRFSNDYNSRLQLRFIQRHQGGTL
RTGRVELASRAWFNENLESPPFYVPAVITNILFVITMLLSSLAIVREKEIGTMEQVIVTPIRKREFILGKTLPFVLIGYI
DVALISLVGTLVFHVPVRGSLGLLFLATTLFLMSALGIGLLISTVSRTQQQAMMSAFFVIFPAMLLSGFAFPIENMPLAV
QWLTLANPLRYYMVIVRGIFLKGVGLTILWPHMAALTVIGLAVLLVAVERFRKTIA

Sequences:

>Translated_376_residues
MLERLRAMLIKEFIQVFRDPRMRIVLFVLPALQTVIFGYAVDMDVKNIPTAIMDRDNSSESRELTDIISSSGHFRITRRI
DNDSQARNLLDRGTVRVVLTIEHGFSQQLARGENVTVQALMDGSDSNTAGVVMGYLGRFSNDYNSRLQLRFIQRHQGGTL
RTGRVELASRAWFNENLESPPFYVPAVITNILFVITMLLSSLAIVREKEIGTMEQVIVTPIRKREFILGKTLPFVLIGYI
DVALISLVGTLVFHVPVRGSLGLLFLATTLFLMSALGIGLLISTVSRTQQQAMMSAFFVIFPAMLLSGFAFPIENMPLAV
QWLTLANPLRYYMVIVRGIFLKGVGLTILWPHMAALTVIGLAVLLVAVERFRKTIA
>Mature_376_residues
MLERLRAMLIKEFIQVFRDPRMRIVLFVLPALQTVIFGYAVDMDVKNIPTAIMDRDNSSESRELTDIISSSGHFRITRRI
DNDSQARNLLDRGTVRVVLTIEHGFSQQLARGENVTVQALMDGSDSNTAGVVMGYLGRFSNDYNSRLQLRFIQRHQGGTL
RTGRVELASRAWFNENLESPPFYVPAVITNILFVITMLLSSLAIVREKEIGTMEQVIVTPIRKREFILGKTLPFVLIGYI
DVALISLVGTLVFHVPVRGSLGLLFLATTLFLMSALGIGLLISTVSRTQQQAMMSAFFVIFPAMLLSGFAFPIENMPLAV
QWLTLANPLRYYMVIVRGIFLKGVGLTILWPHMAALTVIGLAVLLVAVERFRKTIA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=376, Percent_Identity=31.3829787234043, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1787011, Length=343, Percent_Identity=33.8192419825073, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI48994943, Length=371, Percent_Identity=31.8059299191375, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI226510979, Length=331, Percent_Identity=29.607250755287, Blast_Score=116, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24650855, Length=369, Percent_Identity=23.3062330623306, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24650853, Length=369, Percent_Identity=23.3062330623306, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42094; Mature: 42094

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERLRAMLIKEFIQVFRDPRMRIVLFVLPALQTVIFGYAVDMDVKNIPTAIMDRDNSSE
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCCCCH
SRELTDIISSSGHFRITRRIDNDSQARNLLDRGTVRVVLTIEHGFSQQLARGENVTVQAL
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCCEEEEE
MDGSDSNTAGVVMGYLGRFSNDYNSRLQLRFIQRHQGGTLRTGRVELASRAWFNENLESP
ECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCEECCHHHHHHHHHHCCCCCCC
PFYVPAVITNILFVITMLLSSLAIVREKEIGTMEQVIVTPIRKREFILGKTLPFVLIGYI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DVALISLVGTLVFHVPVRGSLGLLFLATTLFLMSALGIGLLISTVSRTQQQAMMSAFFVI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPAMLLSGFAFPIENMPLAVQWLTLANPLRYYMVIVRGIFLKGVGLTILWPHMAALTVIG
HHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LAVLLVAVERFRKTIA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLERLRAMLIKEFIQVFRDPRMRIVLFVLPALQTVIFGYAVDMDVKNIPTAIMDRDNSSE
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCCCCH
SRELTDIISSSGHFRITRRIDNDSQARNLLDRGTVRVVLTIEHGFSQQLARGENVTVQAL
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCCEEEEE
MDGSDSNTAGVVMGYLGRFSNDYNSRLQLRFIQRHQGGTLRTGRVELASRAWFNENLESP
ECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCCEECCHHHHHHHHHHCCCCCCC
PFYVPAVITNILFVITMLLSSLAIVREKEIGTMEQVIVTPIRKREFILGKTLPFVLIGYI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DVALISLVGTLVFHVPVRGSLGLLFLATTLFLMSALGIGLLISTVSRTQQQAMMSAFFVI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPAMLLSGFAFPIENMPLAVQWLTLANPLRYYMVIVRGIFLKGVGLTILWPHMAALTVIG
HHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LAVLLVAVERFRKTIA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]