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The map label for this gene is ybhS [H]

Identifier: 118581311

GI number: 118581311

Start: 3179724

End: 3180860

Strand: Direct

Name: ybhS [H]

Synonym: Ppro_2906

Alternate gene names: 118581311

Gene position: 3179724-3180860 (Clockwise)

Preceding gene: 118581310

Following gene: 118581312

Centisome position: 79.33

GC content: 63.32

Gene sequence:

>1137_bases
ATGAACCTGCGCCGCCTGAAAGCCATTGCCAAAAAGGAATTCATCCACGTCCTGCGCGACCCGCGCAGCCTGATGATGGG
CATCGGCATGCCGATGATTCTGCTGTTCCTGTTCGGCTATGCCCTGACCATGGACGTGGAGCGCGTGCCGCTGGCGGTGT
GGGACCAGGCCAACAGCGTGGAGAGCCGCGAGCTGGTCAGCCGCTTCAGCGGTTCGCGCTACTTCGACCTGCGCATCACC
ACCGACAACTACCGGATGATCGAGGAAGCCATCGACCGGCGGCAGGCCCTGATCGCCCTGGTGATCCCCCCCGATTTCAG
CCGCCGCCTCTCCCGGGGAGAGACTGCGGTGGTGCAGGCCATCGTGGACGGCAGCGACCCCAACACCGCAACAATAGCCC
TGGGATACGCCGACGCGACGGCGCTGGTCTATTCGCGCCAGATCGCCATGGAGCAGCTGCTGCGAGCCGGCACGAGCCTG
GATCGGATACCGGCCCTGGACCTGACTCCCCGGGTCTGGTTCAACAGCGACATGACCTCGCGCAACTTCATCTTCCCCGG
CCTGATTGCGGTGGTGATGATGATCATGGGCGCCATCCTGACCTCCCTCTGCATGGCCCGCGAGTGGGAGAGCGGCACCA
TGGAGCAGCTGATCGCCACGCCGGTCACCCCCCTTGAGCTGATCATGGGCAAGCTGGCCCCCTACTTCTGCATCGGCATT
CTGGACCTGATCCTCTGCGTCGGAGTGGGACAGTTCGTCTTCCAGGTTCCGCTACGAGGCAGCCTCTGGCTGCTGACCCC
CCTGGCCATGCTGTTCCTCTTCGGCGCCCTCTCCTTCGGCATACTGCTCAGCATCATCACCAAAAGCCAGCTTCTGGCAA
GCCAGCTGGCCCTCGTCACCACGGTGCTGCCGGCCTTCCTGCTCTCGGGCTTCATCTTCCCCATCGAAAACATGCCGTTC
CCCATCCGGGTCGTGACCCACATCGTCACTGCCCGCTACTTCGTCTTCATCCTGCGGGGAATCTACCTCAAGGATGTGGG
CCTGACGCTGCTCTGGCCGGAGGTGCTCTTCCTGGCCAGCTTCGGCCTGATCGTTACGCTGCTGGCGGTGGGGAAGTTCA
GGAAAAGCATCGACTAG

Upstream 100 bases:

>100_bases
GAGCCTGGAAGATGTGTTCATCGGGCTGATCGAGGAGCAGGACAGCTGAGGTGAGCAGAAGCTCCCCTCTCTGCGCACGC
ACGAAACGGAACCACGAGCC

Downstream 100 bases:

>100_bases
CCAGAGATGACGCACCGGCTCCGTGCGACCTCCGGCAAAAGGATTGTAGAATGTTGGAACGTCTCCGCGCCATGCTGATC
AAGGAGTTCATCCAGGTCTT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNLRRLKAIAKKEFIHVLRDPRSLMMGIGMPMILLFLFGYALTMDVERVPLAVWDQANSVESRELVSRFSGSRYFDLRIT
TDNYRMIEEAIDRRQALIALVIPPDFSRRLSRGETAVVQAIVDGSDPNTATIALGYADATALVYSRQIAMEQLLRAGTSL
DRIPALDLTPRVWFNSDMTSRNFIFPGLIAVVMMIMGAILTSLCMAREWESGTMEQLIATPVTPLELIMGKLAPYFCIGI
LDLILCVGVGQFVFQVPLRGSLWLLTPLAMLFLFGALSFGILLSIITKSQLLASQLALVTTVLPAFLLSGFIFPIENMPF
PIRVVTHIVTARYFVFILRGIYLKDVGLTLLWPEVLFLASFGLIVTLLAVGKFRKSID

Sequences:

>Translated_378_residues
MNLRRLKAIAKKEFIHVLRDPRSLMMGIGMPMILLFLFGYALTMDVERVPLAVWDQANSVESRELVSRFSGSRYFDLRIT
TDNYRMIEEAIDRRQALIALVIPPDFSRRLSRGETAVVQAIVDGSDPNTATIALGYADATALVYSRQIAMEQLLRAGTSL
DRIPALDLTPRVWFNSDMTSRNFIFPGLIAVVMMIMGAILTSLCMAREWESGTMEQLIATPVTPLELIMGKLAPYFCIGI
LDLILCVGVGQFVFQVPLRGSLWLLTPLAMLFLFGALSFGILLSIITKSQLLASQLALVTTVLPAFLLSGFIFPIENMPF
PIRVVTHIVTARYFVFILRGIYLKDVGLTLLWPEVLFLASFGLIVTLLAVGKFRKSID
>Mature_378_residues
MNLRRLKAIAKKEFIHVLRDPRSLMMGIGMPMILLFLFGYALTMDVERVPLAVWDQANSVESRELVSRFSGSRYFDLRIT
TDNYRMIEEAIDRRQALIALVIPPDFSRRLSRGETAVVQAIVDGSDPNTATIALGYADATALVYSRQIAMEQLLRAGTSL
DRIPALDLTPRVWFNSDMTSRNFIFPGLIAVVMMIMGAILTSLCMAREWESGTMEQLIATPVTPLELIMGKLAPYFCIGI
LDLILCVGVGQFVFQVPLRGSLWLLTPLAMLFLFGALSFGILLSIITKSQLLASQLALVTTVLPAFLLSGFIFPIENMPF
PIRVVTHIVTARYFVFILRGIYLKDVGLTLLWPEVLFLASFGLIVTLLAVGKFRKSID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=354, Percent_Identity=38.9830508474576, Blast_Score=253, Evalue=1e-68,
Organism=Escherichia coli, GI1787010, Length=363, Percent_Identity=31.6804407713499, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI48994943, Length=351, Percent_Identity=31.6239316239316, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI226510979, Length=338, Percent_Identity=26.9230769230769, Blast_Score=94, Evalue=2e-20,
Organism=Drosophila melanogaster, GI85725260, Length=354, Percent_Identity=24.2937853107345, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI85725262, Length=354, Percent_Identity=24.2937853107345, Blast_Score=88, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42177; Mature: 42177

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRRLKAIAKKEFIHVLRDPRSLMMGIGMPMILLFLFGYALTMDVERVPLAVWDQANSV
CCHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHCHHHCCCHHHCCCCCC
ESRELVSRFSGSRYFDLRITTDNYRMIEEAIDRRQALIALVIPPDFSRRLSRGETAVVQA
HHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCHHHHHH
IVDGSDPNTATIALGYADATALVYSRQIAMEQLLRAGTSLDRIPALDLTPRVWFNSDMTS
HCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCC
RNFIFPGLIAVVMMIMGAILTSLCMAREWESGTMEQLIATPVTPLELIMGKLAPYFCIGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LDLILCVGVGQFVFQVPLRGSLWLLTPLAMLFLFGALSFGILLSIITKSQLLASQLALVT
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLPAFLLSGFIFPIENMPFPIRVVTHIVTARYFVFILRGIYLKDVGLTLLWPEVLFLAS
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
FGLIVTLLAVGKFRKSID
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLRRLKAIAKKEFIHVLRDPRSLMMGIGMPMILLFLFGYALTMDVERVPLAVWDQANSV
CCHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHCHHHCCCHHHCCCCCC
ESRELVSRFSGSRYFDLRITTDNYRMIEEAIDRRQALIALVIPPDFSRRLSRGETAVVQA
HHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCHHHHHH
IVDGSDPNTATIALGYADATALVYSRQIAMEQLLRAGTSLDRIPALDLTPRVWFNSDMTS
HCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCC
RNFIFPGLIAVVMMIMGAILTSLCMAREWESGTMEQLIATPVTPLELIMGKLAPYFCIGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LDLILCVGVGQFVFQVPLRGSLWLLTPLAMLFLFGALSFGILLSIITKSQLLASQLALVT
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLPAFLLSGFIFPIENMPFPIRVVTHIVTARYFVFILRGIYLKDVGLTLLWPEVLFLAS
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
FGLIVTLLAVGKFRKSID
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]