| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581278
Identifier: 118581278
GI number: 118581278
Start: 3144026
End: 3145168
Strand: Reverse
Name: 118581278
Synonym: Ppro_2873
Alternate gene names: NA
Gene position: 3145168-3144026 (Counterclockwise)
Preceding gene: 118581279
Following gene: 118581277
Centisome position: 78.47
GC content: 55.21
Gene sequence:
>1143_bases ATGCACTCCCTGCTTGCGGAAGGACAGGTTACGTACGCGCAGGTGACAGGCCCGCGTATTGCGCAAGCCGGGCATAGCAT TGACTCCTCGTGCGCTGCTCCCGGCTGCGCCTCCGTACGCATGGTTGACCCGCTGCAGTACCCCGCGTGGAATGAGCTGG TATGCTCCCTGCCAGACCATTCCATTTTTCACTCCGCCAACTGGGCAATGGTGCTGAACAAATCATACGGCTACCGTCCC CGGTACTTTGCACTGTTTGATGGGGATAAACTGCTCGGTCTCATACCGATGATGGAAATCGTAAGCCTCCTCACTGGCCG CAGGGGAGTCTCTCTTCCCTTCACGGATTACTGCGAGCCGCTGGCGGCCCCGGGCGTATCCTCGAAGGACGTGTATAACG CGCTCATCGAGTACGGCAAACGTGCCCGCTGGCGCTACATCGAATTCAGGGGACAGGGATGCGTGAGCCGTGACGCTCCT TGTTTTGCTCGGTATTACAGACACGTCCTGCCTCTTGCTCCGAATCTGGACAAGTTTGCCGTGGGTTTTCGGGACAGCAC CACCAGAAACATCCACAAGGCCCTGAAAGCCGGGGTAACGGTGAAACTCTGTGACACCTTCGCGGCACTGGAAGAGTTCC GCCGTTTGAATGGCTTGACGCGCAAGACCCATGGCCTGCCACCACAACCCCCCGTTTTCTTCAAAAACATTTTTGACTGT ATTATTTCCCAAGGGCTTGGAAAGGTCGTGCTTGCATCGCACCAGGGTGAGGTGATTGCCGGAGCGGTCTTTTTTCATCT GGGTGATCAAGTCCTGTACAAATATGGCGCTTCCAACCGACGCTACCAGAACCTGAGGGCCAGTAATCTTGTCATCTGGG AGGCAATCAGGTGGTATGCAGAAAAAGGGTTCCGCTCCCTCTGCCTTGGCAGGACTGATTTCGAAAACACGGGACTAAGG CAGTTCAAGAACGGCTGGGGCGGACAGGAACACATCATTTTCTATTACCGCATCAACCCGACAAAAGAGCGCTTCCTTGC GGAAAACCAGTCATCAACGCAACGATCCTACTGGCTATTTCGAAAGCTGCCGGTGAGACTCTCTGAACTTGTCGGAAAGA TTCTGTACAGGCATGTGGGCTGA
Upstream 100 bases:
>100_bases TTGCCCATGTACCCTGAACTTACCCATGAGCAGATTGAGTATGTTGCTCGAGAGACGAAGAATGTGACCATGGCCAGTCG ATGATGTCAAGAGGTGTAGT
Downstream 100 bases:
>100_bases CTCCTGGCAGTTCACCCACACCATGGCTGATGACTCCCATGGCAGGCGACAACGCGATCTCCCGTGAAAGTGCAGGCATA ACTCATGAAAAAGGCGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: FemAB Family Protein
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MHSLLAEGQVTYAQVTGPRIAQAGHSIDSSCAAPGCASVRMVDPLQYPAWNELVCSLPDHSIFHSANWAMVLNKSYGYRP RYFALFDGDKLLGLIPMMEIVSLLTGRRGVSLPFTDYCEPLAAPGVSSKDVYNALIEYGKRARWRYIEFRGQGCVSRDAP CFARYYRHVLPLAPNLDKFAVGFRDSTTRNIHKALKAGVTVKLCDTFAALEEFRRLNGLTRKTHGLPPQPPVFFKNIFDC IISQGLGKVVLASHQGEVIAGAVFFHLGDQVLYKYGASNRRYQNLRASNLVIWEAIRWYAEKGFRSLCLGRTDFENTGLR QFKNGWGGQEHIIFYYRINPTKERFLAENQSSTQRSYWLFRKLPVRLSELVGKILYRHVG
Sequences:
>Translated_380_residues MHSLLAEGQVTYAQVTGPRIAQAGHSIDSSCAAPGCASVRMVDPLQYPAWNELVCSLPDHSIFHSANWAMVLNKSYGYRP RYFALFDGDKLLGLIPMMEIVSLLTGRRGVSLPFTDYCEPLAAPGVSSKDVYNALIEYGKRARWRYIEFRGQGCVSRDAP CFARYYRHVLPLAPNLDKFAVGFRDSTTRNIHKALKAGVTVKLCDTFAALEEFRRLNGLTRKTHGLPPQPPVFFKNIFDC IISQGLGKVVLASHQGEVIAGAVFFHLGDQVLYKYGASNRRYQNLRASNLVIWEAIRWYAEKGFRSLCLGRTDFENTGLR QFKNGWGGQEHIIFYYRINPTKERFLAENQSSTQRSYWLFRKLPVRLSELVGKILYRHVG >Mature_380_residues MHSLLAEGQVTYAQVTGPRIAQAGHSIDSSCAAPGCASVRMVDPLQYPAWNELVCSLPDHSIFHSANWAMVLNKSYGYRP RYFALFDGDKLLGLIPMMEIVSLLTGRRGVSLPFTDYCEPLAAPGVSSKDVYNALIEYGKRARWRYIEFRGQGCVSRDAP CFARYYRHVLPLAPNLDKFAVGFRDSTTRNIHKALKAGVTVKLCDTFAALEEFRRLNGLTRKTHGLPPQPPVFFKNIFDC IISQGLGKVVLASHQGEVIAGAVFFHLGDQVLYKYGASNRRYQNLRASNLVIWEAIRWYAEKGFRSLCLGRTDFENTGLR QFKNGWGGQEHIIFYYRINPTKERFLAENQSSTQRSYWLFRKLPVRLSELVGKILYRHVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43060; Mature: 43060
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLLAEGQVTYAQVTGPRIAQAGHSIDSSCAAPGCASVRMVDPLQYPAWNELVCSLPDH CCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHEECCCCC SIFHSANWAMVLNKSYGYRPRYFALFDGDKLLGLIPMMEIVSLLTGRRGVSLPFTDYCEP HHEECCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LAAPGVSSKDVYNALIEYGKRARWRYIEFRGQGCVSRDAPCFARYYRHVLPLAPNLDKFA HCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHE VGFRDSTTRNIHKALKAGVTVKLCDTFAALEEFRRLNGLTRKTHGLPPQPPVFFKNIFDC ECCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHH IISQGLGKVVLASHQGEVIAGAVFFHLGDQVLYKYGASNRRYQNLRASNLVIWEAIRWYA HHHCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH EKGFRSLCLGRTDFENTGLRQFKNGWGGQEHIIFYYRINPTKERFLAENQSSTQRSYWLF HHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCHHHHHHHCCCCCHHHHHHHH RKLPVRLSELVGKILYRHVG HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHSLLAEGQVTYAQVTGPRIAQAGHSIDSSCAAPGCASVRMVDPLQYPAWNELVCSLPDH CCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHEECCCCC SIFHSANWAMVLNKSYGYRPRYFALFDGDKLLGLIPMMEIVSLLTGRRGVSLPFTDYCEP HHEECCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LAAPGVSSKDVYNALIEYGKRARWRYIEFRGQGCVSRDAPCFARYYRHVLPLAPNLDKFA HCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHE VGFRDSTTRNIHKALKAGVTVKLCDTFAALEEFRRLNGLTRKTHGLPPQPPVFFKNIFDC ECCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHH IISQGLGKVVLASHQGEVIAGAVFFHLGDQVLYKYGASNRRYQNLRASNLVIWEAIRWYA HHHCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH EKGFRSLCLGRTDFENTGLRQFKNGWGGQEHIIFYYRINPTKERFLAENQSSTQRSYWLF HHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCHHHHHHHCCCCCHHHHHHHH RKLPVRLSELVGKILYRHVG HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA