| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581268
Identifier: 118581268
GI number: 118581268
Start: 3133747
End: 3134880
Strand: Reverse
Name: 118581268
Synonym: Ppro_2863
Alternate gene names: NA
Gene position: 3134880-3133747 (Counterclockwise)
Preceding gene: 118581269
Following gene: 118581267
Centisome position: 78.22
GC content: 49.38
Gene sequence:
>1134_bases ATGCGGACAGCACTACTGAACAGATCCAACTCACCAGGGTCGTTCGATTTCGACGCCATTAGACCATTTCGACAACGAGG AACGAAGACCATGAGCGTAAATAGCAGAATACTGTGGGTCGATTTGGAGAACTCCCCCCATGTCCCGTTCTTCAAACCAA TAATTGAAGAACTGGAAAAGCATGGGTACCGGGTTGTTATTACCGCCCGCGACTGTTTCCAAGTGTGCGGACTTGCTGAC CTGTATGGCCTTCCTTACACACGAATCGGACGACACTACGGAAAGCACAAGGCGCTCAAGGTAGTGGGAGCCGTGATACG GGCTCTGCAAATGAGGAACACATTGGCTAGACCCCTCCCCTCCCTGGCAATTGCCCATGGATCCCGCTCCCAGCTACTCG CAGCAAAAATTCTTCATATACCCGCACTTCAACTCGCCGATTATGAGTTTTCCAACAAAATGCCATCTTTCTTAAGCTCA GATTGGATAATGGTTCCCGAGACTATTCCCGCGGGCTTGCACTGGCGGAATACCTCCCGCATAAGCACATATCCTGGAAT AAAGGAAGATGTCTACGTTCCCACGTTCAAACCACAAACGGGTATACTGTCGGAATTGGGTATACTTGAAAAGGAAATCG TAGTCACCATCCGCCCCCCCGCAAGTGAGGCCCACTATCACAATCCTAAGAGTGACGATCTGTTTTATGCCACAGTCAAC TGGCTCTCGGGCATCGACAATCTTCGTATGGTCGTATTACCCAGAAACAGCAGCCAGGCAGCACACATCGGTAAAACATG GCCAGCCTTGATTGGCGAAGCTAAAATGGTGATTCCGGACAGGGTGCTGGACGGCCTGAATCTTATCTGGCATTCGGATC TCGTCATCAGTGGTGGTGGCACGATGAACCGCGAGGCGGCAGCCTTGGGAGTACCAGTATATAGTATATTCAAAGGCGAA ATTGGAGCTGTTGACAAGTATTTAGCGAGTACTGGCAGACTCACGCTCCTGGAAACAGCAGATGATATAACTAATAAAGT TCTTATTCAAAAATGGGAAAGGCCGAGTTCACCCGACCACAATCCCCGTCCAGCACTGAAAGTAATCGTTGACAAAATAC TGGAGTTAGTTTGA
Upstream 100 bases:
>100_bases TGGACGGAGTGATGTGCCAAGGGACCAAGGACTTTGGAGCCTGCGACCGCAGTTGTTTTTTCTTCTGGAGAGAAGAGTGG CTCGAAAAAATGAATGACTA
Downstream 100 bases:
>100_bases AAGTAGTTTTTCCTTTTTGTTGTTTTTGTAATGCTATTATCTATCACTGTAATGTTTCAAACATATATTATGACCTTTCA TGACAAGATAATAAAAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MRTALLNRSNSPGSFDFDAIRPFRQRGTKTMSVNSRILWVDLENSPHVPFFKPIIEELEKHGYRVVITARDCFQVCGLAD LYGLPYTRIGRHYGKHKALKVVGAVIRALQMRNTLARPLPSLAIAHGSRSQLLAAKILHIPALQLADYEFSNKMPSFLSS DWIMVPETIPAGLHWRNTSRISTYPGIKEDVYVPTFKPQTGILSELGILEKEIVVTIRPPASEAHYHNPKSDDLFYATVN WLSGIDNLRMVVLPRNSSQAAHIGKTWPALIGEAKMVIPDRVLDGLNLIWHSDLVISGGGTMNREAAALGVPVYSIFKGE IGAVDKYLASTGRLTLLETADDITNKVLIQKWERPSSPDHNPRPALKVIVDKILELV
Sequences:
>Translated_377_residues MRTALLNRSNSPGSFDFDAIRPFRQRGTKTMSVNSRILWVDLENSPHVPFFKPIIEELEKHGYRVVITARDCFQVCGLAD LYGLPYTRIGRHYGKHKALKVVGAVIRALQMRNTLARPLPSLAIAHGSRSQLLAAKILHIPALQLADYEFSNKMPSFLSS DWIMVPETIPAGLHWRNTSRISTYPGIKEDVYVPTFKPQTGILSELGILEKEIVVTIRPPASEAHYHNPKSDDLFYATVN WLSGIDNLRMVVLPRNSSQAAHIGKTWPALIGEAKMVIPDRVLDGLNLIWHSDLVISGGGTMNREAAALGVPVYSIFKGE IGAVDKYLASTGRLTLLETADDITNKVLIQKWERPSSPDHNPRPALKVIVDKILELV >Mature_377_residues MRTALLNRSNSPGSFDFDAIRPFRQRGTKTMSVNSRILWVDLENSPHVPFFKPIIEELEKHGYRVVITARDCFQVCGLAD LYGLPYTRIGRHYGKHKALKVVGAVIRALQMRNTLARPLPSLAIAHGSRSQLLAAKILHIPALQLADYEFSNKMPSFLSS DWIMVPETIPAGLHWRNTSRISTYPGIKEDVYVPTFKPQTGILSELGILEKEIVVTIRPPASEAHYHNPKSDDLFYATVN WLSGIDNLRMVVLPRNSSQAAHIGKTWPALIGEAKMVIPDRVLDGLNLIWHSDLVISGGGTMNREAAALGVPVYSIFKGE IGAVDKYLASTGRLTLLETADDITNKVLIQKWERPSSPDHNPRPALKVIVDKILELV
Specific function: Unknown
COG id: COG1817
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007152 [H]
Pfam domain/function: PF04007 DUF354 [H]
EC number: NA
Molecular weight: Translated: 42006; Mature: 42006
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTALLNRSNSPGSFDFDAIRPFRQRGTKTMSVNSRILWVDLENSPHVPFFKPIIEELEK CCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHH HGYRVVITARDCFQVCGLADLYGLPYTRIGRHYGKHKALKVVGAVIRALQMRNTLARPLP CCCEEEEEEHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SLAIAHGSRSQLLAAKILHIPALQLADYEFSNKMPSFLSSDWIMVPETIPAGLHWRNTSR HHEECCCCHHHHHHHHHHHCCCHHHCCCHHHCCCCHHHCCCCEEECCCCCCCCEECCCCC ISTYPGIKEDVYVPTFKPQTGILSELGILEKEIVVTIRPPASEAHYHNPKSDDLFYATVN CCCCCCCCCCEECCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEH WLSGIDNLRMVVLPRNSSQAAHIGKTWPALIGEAKMVIPDRVLDGLNLIWHSDLVISGGG HHCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCEEECHHHHHHHHHEEEECCEEEECCC TMNREAAALGVPVYSIFKGEIGAVDKYLASTGRLTLLETADDITNKVLIQKWERPSSPDH CCCCCHHHHCCCHHHHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCCCC NPRPALKVIVDKILELV CCCHHHHHHHHHHHHHC >Mature Secondary Structure MRTALLNRSNSPGSFDFDAIRPFRQRGTKTMSVNSRILWVDLENSPHVPFFKPIIEELEK CCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHH HGYRVVITARDCFQVCGLADLYGLPYTRIGRHYGKHKALKVVGAVIRALQMRNTLARPLP CCCEEEEEEHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SLAIAHGSRSQLLAAKILHIPALQLADYEFSNKMPSFLSSDWIMVPETIPAGLHWRNTSR HHEECCCCHHHHHHHHHHHCCCHHHCCCHHHCCCCHHHCCCCEEECCCCCCCCEECCCCC ISTYPGIKEDVYVPTFKPQTGILSELGILEKEIVVTIRPPASEAHYHNPKSDDLFYATVN CCCCCCCCCCEECCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEH WLSGIDNLRMVVLPRNSSQAAHIGKTWPALIGEAKMVIPDRVLDGLNLIWHSDLVISGGG HHCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCEEECHHHHHHHHHEEEECCEEEECCC TMNREAAALGVPVYSIFKGEIGAVDKYLASTGRLTLLETADDITNKVLIQKWERPSSPDH CCCCCHHHHCCCHHHHHCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCCCCCC NPRPALKVIVDKILELV CCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]