| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581267
Identifier: 118581267
GI number: 118581267
Start: 3132214
End: 3133716
Strand: Reverse
Name: 118581267
Synonym: Ppro_2862
Alternate gene names: NA
Gene position: 3133716-3132214 (Counterclockwise)
Preceding gene: 118581268
Following gene: 118581266
Centisome position: 78.19
GC content: 35.46
Gene sequence:
>1503_bases ATGCTATTATCTATCACTGTAATGTTTCAAACATATATTATGACCTTTCATGACAAGATAATAAAAGATTTAACTAGGTA CGTTCCGCAAGTAATACTACCTGCGATATTGGCCTTCATTTCTGTGCCAATATACACTAAGTTGTTTGATCCATCTGCAT ATGGTAATCTATACATAGCTAAAGCCGCTTTAAACTTACTAGACCGTTGTAGCAATTGGATTGGCGCATCATTAACCCGC TATTATAACGAATACATAAAGACCCAGTCATTGAGTGAAATGCTGACAAGTATTATAAAGGCTAACGTATTACTTGCAGC TCTCACAACCATACCAATGCTTCTTTTGCTAAAGATGATGCAATTGGATAGCGAATTAAAGCGGCTTCTCCAGATTGGCA TTGTGTTGTTTGCTTTTACACCAACGGGAAACGTATTGCGAAACACACTAAGGATGGAAAGAAGAATTAATCTACACACC ATTTTTATAGTTTCTAGAAATGTTTTTTCCTTCATACTATCTTTGGTGCTAATTTATAAACTTAAGTTGGGAATTGAGTC TATTCTTTTGGGTGAGCTAATGGTTGTTGTTGCAATACTGCCTTTCTTATGGAATACAGCGCTTTCAAGCAACTTCAACA TCTCCTCTAAATTAAATATCAATATAATAAGTCGATTTTTCAAATACGGTGCTCCACTTACAATAAGCATAGTTGGTTTA TGGCTTCTTGATTTTTCAGACAGATATATTATTAAGTATTTACTCGGCAGTCATGCTGTTGGTGTATATTCTGCTTGTTA CAATATAACTTGGAACTCTCTTTTTATGTTAGTGCATTTGTTTTATATGATGGAAGAGCCTTTGGCAATGAAAATATATG CCCAGGAAGGCGCAGATGCCTTAAAAGGGTTTATTGCATGCGAAGTGAGATTGTTTTTAATACTTATAGTACCTTGCATT TTTTTCTTATGCGTTTATTCTGATACTATATTCTCTTTTATGGTTTCAGCAAAGTACCAGAGTGGTGCATCATTAGTTCC CTATGTTTCATTGAGCGTACTTGTTGCCGGAATTATTTATAAATATAAATTAGGCATCATGGCAATGGAAAAGACAAGAT CACTTATGTATATTGTTATTGCAGCAGGCATATTCAACGTCATTTTGAATATCATCCTCGTACCTTTTTATGGAATTATT GGAGCAGCTGCCGGCACGCTAGTAGCATACACAATCTACCTTTCAATGATTATTATTGCCACAAAGCGGATATTTCCGTG GCAATTTCCAATTATTTCATTAGTAAGAATAGCATTTTGCGGAATGATTCCTGCCACTTTATCATGGATCGCCTTAAGCA GGAGCGCTTTTTTACCATTGCACATACTGATTGCTATGCTATACCCACTTATATATATATATTTACTTATTGCAACGAAC GAGACCAGCAAGTCTGATATCAAATCAACTTTATCCGTTCTTACCGCAAGCATGAGAGCTTGA
Upstream 100 bases:
>100_bases GAGTTCACCCGACCACAATCCCCGTCCAGCACTGAAAGTAATCGTTGACAAAATACTGGAGTTAGTTTGAAAGTAGTTTT TCCTTTTTGTTGTTTTTGTA
Downstream 100 bases:
>100_bases TGTCATTCAGAACATGGTTACACAATTCCTGTTAATTACTCAACTTTCGCAGTTGGTATAAATACGCAAAATATTGTAAT TATTAATAGTATAGCGTCGT
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Exopolysaccharide Biosynthesis Protein
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MLLSITVMFQTYIMTFHDKIIKDLTRYVPQVILPAILAFISVPIYTKLFDPSAYGNLYIAKAALNLLDRCSNWIGASLTR YYNEYIKTQSLSEMLTSIIKANVLLAALTTIPMLLLLKMMQLDSELKRLLQIGIVLFAFTPTGNVLRNTLRMERRINLHT IFIVSRNVFSFILSLVLIYKLKLGIESILLGELMVVVAILPFLWNTALSSNFNISSKLNINIISRFFKYGAPLTISIVGL WLLDFSDRYIIKYLLGSHAVGVYSACYNITWNSLFMLVHLFYMMEEPLAMKIYAQEGADALKGFIACEVRLFLILIVPCI FFLCVYSDTIFSFMVSAKYQSGASLVPYVSLSVLVAGIIYKYKLGIMAMEKTRSLMYIVIAAGIFNVILNIILVPFYGII GAAAGTLVAYTIYLSMIIIATKRIFPWQFPIISLVRIAFCGMIPATLSWIALSRSAFLPLHILIAMLYPLIYIYLLIATN ETSKSDIKSTLSVLTASMRA
Sequences:
>Translated_500_residues MLLSITVMFQTYIMTFHDKIIKDLTRYVPQVILPAILAFISVPIYTKLFDPSAYGNLYIAKAALNLLDRCSNWIGASLTR YYNEYIKTQSLSEMLTSIIKANVLLAALTTIPMLLLLKMMQLDSELKRLLQIGIVLFAFTPTGNVLRNTLRMERRINLHT IFIVSRNVFSFILSLVLIYKLKLGIESILLGELMVVVAILPFLWNTALSSNFNISSKLNINIISRFFKYGAPLTISIVGL WLLDFSDRYIIKYLLGSHAVGVYSACYNITWNSLFMLVHLFYMMEEPLAMKIYAQEGADALKGFIACEVRLFLILIVPCI FFLCVYSDTIFSFMVSAKYQSGASLVPYVSLSVLVAGIIYKYKLGIMAMEKTRSLMYIVIAAGIFNVILNIILVPFYGII GAAAGTLVAYTIYLSMIIIATKRIFPWQFPIISLVRIAFCGMIPATLSWIALSRSAFLPLHILIAMLYPLIYIYLLIATN ETSKSDIKSTLSVLTASMRA >Mature_500_residues MLLSITVMFQTYIMTFHDKIIKDLTRYVPQVILPAILAFISVPIYTKLFDPSAYGNLYIAKAALNLLDRCSNWIGASLTR YYNEYIKTQSLSEMLTSIIKANVLLAALTTIPMLLLLKMMQLDSELKRLLQIGIVLFAFTPTGNVLRNTLRMERRINLHT IFIVSRNVFSFILSLVLIYKLKLGIESILLGELMVVVAILPFLWNTALSSNFNISSKLNINIISRFFKYGAPLTISIVGL WLLDFSDRYIIKYLLGSHAVGVYSACYNITWNSLFMLVHLFYMMEEPLAMKIYAQEGADALKGFIACEVRLFLILIVPCI FFLCVYSDTIFSFMVSAKYQSGASLVPYVSLSVLVAGIIYKYKLGIMAMEKTRSLMYIVIAAGIFNVILNIILVPFYGII GAAAGTLVAYTIYLSMIIIATKRIFPWQFPIISLVRIAFCGMIPATLSWIALSRSAFLPLHILIAMLYPLIYIYLLIATN ETSKSDIKSTLSVLTASMRA
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56331; Mature: 56331
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSITVMFQTYIMTFHDKIIKDLTRYVPQVILPAILAFISVPIYTKLFDPSAYGNLYIA CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH KAALNLLDRCSNWIGASLTRYYNEYIKTQSLSEMLTSIIKANVLLAALTTIPMLLLLKMM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLDSELKRLLQIGIVLFAFTPTGNVLRNTLRMERRINLHTIFIVSRNVFSFILSLVLIYK HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHH LKLGIESILLGELMVVVAILPFLWNTALSSNFNISSKLNINIISRFFKYGAPLTISIVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHH WLLDFSDRYIIKYLLGSHAVGVYSACYNITWNSLFMLVHLFYMMEEPLAMKIYAQEGADA HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHH LKGFIACEVRLFLILIVPCIFFLCVYSDTIFSFMVSAKYQSGASLVPYVSLSVLVAGIIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KYKLGIMAMEKTRSLMYIVIAAGIFNVILNIILVPFYGIIGAAAGTLVAYTIYLSMIIIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKRIFPWQFPIISLVRIAFCGMIPATLSWIALSRSAFLPLHILIAMLYPLIYIYLLIATN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC ETSKSDIKSTLSVLTASMRA CCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLSITVMFQTYIMTFHDKIIKDLTRYVPQVILPAILAFISVPIYTKLFDPSAYGNLYIA CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH KAALNLLDRCSNWIGASLTRYYNEYIKTQSLSEMLTSIIKANVLLAALTTIPMLLLLKMM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLDSELKRLLQIGIVLFAFTPTGNVLRNTLRMERRINLHTIFIVSRNVFSFILSLVLIYK HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHH LKLGIESILLGELMVVVAILPFLWNTALSSNFNISSKLNINIISRFFKYGAPLTISIVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHH WLLDFSDRYIIKYLLGSHAVGVYSACYNITWNSLFMLVHLFYMMEEPLAMKIYAQEGADA HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCHHH LKGFIACEVRLFLILIVPCIFFLCVYSDTIFSFMVSAKYQSGASLVPYVSLSVLVAGIIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KYKLGIMAMEKTRSLMYIVIAAGIFNVILNIILVPFYGIIGAAAGTLVAYTIYLSMIIIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKRIFPWQFPIISLVRIAFCGMIPATLSWIALSRSAFLPLHILIAMLYPLIYIYLLIATN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC ETSKSDIKSTLSVLTASMRA CCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA