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The map label for this gene is rbn [C]

Identifier: 118581183

GI number: 118581183

Start: 3036987

End: 3038240

Strand: Reverse

Name: rbn [C]

Synonym: Ppro_2776

Alternate gene names: 118581183

Gene position: 3038240-3036987 (Counterclockwise)

Preceding gene: 118581184

Following gene: 118581181

Centisome position: 75.8

GC content: 62.36

Gene sequence:

>1254_bases
ATGAAGGGGCGACTGTTCGACCTGCTCCGCTTCTGCTATCTTGTCAGGGCCGGTTTCTCCCTGCACCAGGGGGCGTTGCG
CGCGGCTGCCCTCACCTATACCACCATGCTCTCGCTTGTTCCCGTACTTGCCATTGCCTTTGCCGTCCTCAAGGGGCTGG
GCGCCCAGAATACCCTTGAGCCGGTTCTACAGAGGTTTGCCGGCGACTCCCAGGAAACCATCTCCCGCATCGTTGCCTAC
GTCAACAACACCAACTTCAAATCAATCGGAGCAATCGGACTGCTGGTTCTGGTGATGACGGTCATTTCTCTTTTGGGAAA
CATCGAAATGGCCTTCAATACCATCTGGGGAGTCCGGGAGACACGTTCGCTGCAGCGACGCTTCAGTGACTATCTCAGCG
TGGTCGTGGTCGGGCCGATCCTGATCCTGGTGGCCACCAGCATGACCACTTCCCTGCAGAACCAGTGGGTCGTCAAGTGG
CTGCTGCTGCATGAGTATCTTGGCGAGGCGGTCCTGTCCGTCTTCAGGCTGTCCCCCTACGTCAGCGTTTGGATCGCCCT
GGTGTTCCTCTATATCTACATTCCCAATACCAGGGTGCGCTTCCGCTCGGCCCTTTTGGGGGGGATTCTGGCAGGAACCG
CATGGCAGATGGCCCAGTGGGCGTACTTTCATTTTCAGGTCGGCGTTGCCAATTACAACGCCATCTACGGCACCCTGGCC
GCATTGCCGGTGTTCCTGGTCTGGGTATACACCAGCTGGCTGATCGTGCTGCTGGGGCTGGAGATCGTCTGCATCCACCA
GCGCCGGAGACATGTCGCTGTCTGCTCCCGTAGCGACGCGCCCAGCCCGGCCGCCCATGAGGAGCGCGCTCTTGCCCTCT
TGCTCCAGGTCTGCCGCCACTTCCGCGAGAACGGCCCGCCGCCCGGGGCGGAGCGTCTGGCAAACGAACTGGCCCTGGGG
CAGGATCAGGTGGAGGAGGGGCTCGAGGCCCTGGACAGGCTGGGGTATCTGGTTCAGGCCGCTGGCAGCGAGCCGGGCTG
GCTGCCAGCACGGGAACCAGCCGACATGAAGGTGAACGCTCTTCTGGCCGGGTTGCGGGGCAGTGCCGCATCAGATGACG
CATCTCCTGGCGCCATGGTGCTGGCGGCGGACATCATCCGCCGCGACGCGGAAAGCAGCCGGCTGTCACTGGAGGCCCTG
ACGCTGCACGATCTGCTGGAAACCCGGGAGCGCGGGACGGACGTTGCGACTTAA

Upstream 100 bases:

>100_bases
AACAGCCCAGAGGGAGGTGAGTCCGCACATGTCAACCGCGAACAGGCCGTGCGCCATACCCGCCGCGCTGATGCCGGAGG
ACCCTGGAGCCTGGCGGGGG

Downstream 100 bases:

>100_bases
ATGACCCAGTGGCGGGGTGGGGGGCCGGTTGACAAGAGTCGGTGCTCTGGCTAGGCGGGCGGGAGTATCCTGCTCCGTCT
CACGCAGGGTCGGTAGAGGG

Product: putative ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKGRLFDLLRFCYLVRAGFSLHQGALRAAALTYTTMLSLVPVLAIAFAVLKGLGAQNTLEPVLQRFAGDSQETISRIVAY
VNNTNFKSIGAIGLLVLVMTVISLLGNIEMAFNTIWGVRETRSLQRRFSDYLSVVVVGPILILVATSMTTSLQNQWVVKW
LLLHEYLGEAVLSVFRLSPYVSVWIALVFLYIYIPNTRVRFRSALLGGILAGTAWQMAQWAYFHFQVGVANYNAIYGTLA
ALPVFLVWVYTSWLIVLLGLEIVCIHQRRRHVAVCSRSDAPSPAAHEERALALLLQVCRHFRENGPPPGAERLANELALG
QDQVEEGLEALDRLGYLVQAAGSEPGWLPAREPADMKVNALLAGLRGSAASDDASPGAMVLAADIIRRDAESSRLSLEAL
TLHDLLETRERGTDVAT

Sequences:

>Translated_417_residues
MKGRLFDLLRFCYLVRAGFSLHQGALRAAALTYTTMLSLVPVLAIAFAVLKGLGAQNTLEPVLQRFAGDSQETISRIVAY
VNNTNFKSIGAIGLLVLVMTVISLLGNIEMAFNTIWGVRETRSLQRRFSDYLSVVVVGPILILVATSMTTSLQNQWVVKW
LLLHEYLGEAVLSVFRLSPYVSVWIALVFLYIYIPNTRVRFRSALLGGILAGTAWQMAQWAYFHFQVGVANYNAIYGTLA
ALPVFLVWVYTSWLIVLLGLEIVCIHQRRRHVAVCSRSDAPSPAAHEERALALLLQVCRHFRENGPPPGAERLANELALG
QDQVEEGLEALDRLGYLVQAAGSEPGWLPAREPADMKVNALLAGLRGSAASDDASPGAMVLAADIIRRDAESSRLSLEAL
TLHDLLETRERGTDVAT
>Mature_417_residues
MKGRLFDLLRFCYLVRAGFSLHQGALRAAALTYTTMLSLVPVLAIAFAVLKGLGAQNTLEPVLQRFAGDSQETISRIVAY
VNNTNFKSIGAIGLLVLVMTVISLLGNIEMAFNTIWGVRETRSLQRRFSDYLSVVVVGPILILVATSMTTSLQNQWVVKW
LLLHEYLGEAVLSVFRLSPYVSVWIALVFLYIYIPNTRVRFRSALLGGILAGTAWQMAQWAYFHFQVGVANYNAIYGTLA
ALPVFLVWVYTSWLIVLLGLEIVCIHQRRRHVAVCSRSDAPSPAAHEERALALLLQVCRHFRENGPPPGAERLANELALG
QDQVEEGLEALDRLGYLVQAAGSEPGWLPAREPADMKVNALLAGLRGSAASDDASPGAMVLAADIIRRDAESSRLSLEAL
TLHDLLETRERGTDVAT

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=266, Percent_Identity=29.3233082706767, Blast_Score=108, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 45845; Mature: 45845

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA