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The map label for this gene is hypE [H]

Identifier: 118581184

GI number: 118581184

Start: 3038436

End: 3039449

Strand: Reverse

Name: hypE [H]

Synonym: Ppro_2777

Alternate gene names: 118581184

Gene position: 3039449-3038436 (Counterclockwise)

Preceding gene: 118581185

Following gene: 118581183

Centisome position: 75.83

GC content: 65.98

Gene sequence:

>1014_bases
GTGGACAACGACCTCATTCTACTGGGTCACGGCAGCGGCGGGAAACTCTCCCACCAGCTGCTCTCGGACCTTGTCATCCC
CACCCTGTCGGGCATACCGCCCGCGGGTCAGAACGACGCGGCGGTGGTGACCCATAATGGACAGCGCTTCGCCTTTACCA
CCGATTCCTACGTGGTTGATCCGCTCTTCTTCCCGGGTGGCAATATCGGCTGCCTGGCGGTGAACGGTACGATCAACGAC
CTCGCCATGATGGGGGCGCGACCGCTCTACATGAGTGTGGGGCTGATCATGGAGGAAGGGTTCAGCAGGGCAGAGCTGAA
GGAGATCCTGGACTCCATGCGCGCCGCCGCGGACGGGGCGGGGGTGGCTATCGTGACCGGTGATACCAAGGTTGTTCCCC
GGGGGAAGGCAGACCGGATATTCATCAATACCTCCGGCGTGGGGGTCATCGAGCATGATCTGGCCATTGGCGGCAACTGT
GCCCGGCCTGGCGACCGGGTGCTGATCAACGGCGCCATCGGTGACCACGGCATTGCGGTCATGGCCAAGAGGGAGGGGCT
CGACCTGGAGAGCGACATCAGGAGCGACTGCGCGGCGCTCAACGGTCTGGTGGAGGAGATCCTCAAGGAGGGAGACGCGG
TGCATGTCCTGCGCGATCCGACCCGCGGCGGGGTTGCCACCACCCTCAAGGAGATCGCCCTCCAGTCCCGGGTCGGCATC
ACCCTGCAGGAAAGAGCGCTTCCCTACAACGGCGCGGTCAAGGGGGTCTGCGCCATACTCGGCCTGGATCCGCTCTACGT
GGCCAACGAGGGGAAAATCCTGGTGGTGGCAGCGCCCCAGGCGGCGGACGCCCTGCTTGAGCGGATGCGCTCCCATCCCC
TGGGGCGCGAAGCCGCCATCATCGGCGAGGTGACCGGCGAGGACGACCGCGGGCGCCTGGAGATCGACACGGTGTCGGGG
GGGACCCGGGCGGTTGAGATGCTGGCCGGCGAACAGCTCCCCCGCATCTGCTGA

Upstream 100 bases:

>100_bases
TGCATGGTGTCCAGCGAAGGGACCTGCGCCGCGGCGTACAAGTACGGCAGATAGGCGAAAACTATTTTTAGTTCCGGCCT
GGCCGGATCAGGAGCGATAC

Downstream 100 bases:

>100_bases
TCCGTGGCGATGGGTGCGGGGCCAAGTCGTCCCGCACATGTGGTATAACCATGCCGTGTGGTAGCGTTTGTATCCGAATG
CCGAATCCAGCTTGAAACAG

Product: hydrogenase expression/formation protein HypE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MDNDLILLGHGSGGKLSHQLLSDLVIPTLSGIPPAGQNDAAVVTHNGQRFAFTTDSYVVDPLFFPGGNIGCLAVNGTIND
LAMMGARPLYMSVGLIMEEGFSRAELKEILDSMRAAADGAGVAIVTGDTKVVPRGKADRIFINTSGVGVIEHDLAIGGNC
ARPGDRVLINGAIGDHGIAVMAKREGLDLESDIRSDCAALNGLVEEILKEGDAVHVLRDPTRGGVATTLKEIALQSRVGI
TLQERALPYNGAVKGVCAILGLDPLYVANEGKILVVAAPQAADALLERMRSHPLGREAAIIGEVTGEDDRGRLEIDTVSG
GTRAVEMLAGEQLPRIC

Sequences:

>Translated_337_residues
MDNDLILLGHGSGGKLSHQLLSDLVIPTLSGIPPAGQNDAAVVTHNGQRFAFTTDSYVVDPLFFPGGNIGCLAVNGTIND
LAMMGARPLYMSVGLIMEEGFSRAELKEILDSMRAAADGAGVAIVTGDTKVVPRGKADRIFINTSGVGVIEHDLAIGGNC
ARPGDRVLINGAIGDHGIAVMAKREGLDLESDIRSDCAALNGLVEEILKEGDAVHVLRDPTRGGVATTLKEIALQSRVGI
TLQERALPYNGAVKGVCAILGLDPLYVANEGKILVVAAPQAADALLERMRSHPLGREAAIIGEVTGEDDRGRLEIDTVSG
GTRAVEMLAGEQLPRIC
>Mature_337_residues
MDNDLILLGHGSGGKLSHQLLSDLVIPTLSGIPPAGQNDAAVVTHNGQRFAFTTDSYVVDPLFFPGGNIGCLAVNGTIND
LAMMGARPLYMSVGLIMEEGFSRAELKEILDSMRAAADGAGVAIVTGDTKVVPRGKADRIFINTSGVGVIEHDLAIGGNC
ARPGDRVLINGAIGDHGIAVMAKREGLDLESDIRSDCAALNGLVEEILKEGDAVHVLRDPTRGGVATTLKEIALQSRVGI
TLQERALPYNGAVKGVCAILGLDPLYVANEGKILVVAAPQAADALLERMRSHPLGREAAIIGEVTGEDDRGRLEIDTVSG
GTRAVEMLAGEQLPRIC

Specific function: Unknown

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

Organism=Escherichia coli, GI226510967, Length=342, Percent_Identity=45.6140350877193, Blast_Score=278, Evalue=3e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 35225; Mature: 35225

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNDLILLGHGSGGKLSHQLLSDLVIPTLSGIPPAGQNDAAVVTHNGQRFAFTTDSYVVD
CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCEEEC
PLFFPGGNIGCLAVNGTINDLAMMGARPLYMSVGLIMEEGFSRAELKEILDSMRAAADGA
EEECCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
GVAIVTGDTKVVPRGKADRIFINTSGVGVIEHDLAIGGNCARPGDRVLINGAIGDHGIAV
CEEEEECCEEEECCCCCCEEEEECCCCEEEEECEEECCCCCCCCCEEEEECCCCCCCEEE
MAKREGLDLESDIRSDCAALNGLVEEILKEGDAVHVLRDPTRGGVATTLKEIALQSRVGI
EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
TLQERALPYNGAVKGVCAILGLDPLYVANEGKILVVAAPQAADALLERMRSHPLGREAAI
EEHHCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCCEEE
IGEVTGEDDRGRLEIDTVSGGTRAVEMLAGEQLPRIC
EEEECCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDNDLILLGHGSGGKLSHQLLSDLVIPTLSGIPPAGQNDAAVVTHNGQRFAFTTDSYVVD
CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCEEEC
PLFFPGGNIGCLAVNGTINDLAMMGARPLYMSVGLIMEEGFSRAELKEILDSMRAAADGA
EEECCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
GVAIVTGDTKVVPRGKADRIFINTSGVGVIEHDLAIGGNCARPGDRVLINGAIGDHGIAV
CEEEEECCEEEECCCCCCEEEEECCCCEEEEECEEECCCCCCCCCEEEEECCCCCCCEEE
MAKREGLDLESDIRSDCAALNGLVEEILKEGDAVHVLRDPTRGGVATTLKEIALQSRVGI
EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
TLQERALPYNGAVKGVCAILGLDPLYVANEGKILVVAAPQAADALLERMRSHPLGREAAI
EEHHCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCCEEE
IGEVTGEDDRGRLEIDTVSGGTRAVEMLAGEQLPRIC
EEEECCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8326860 [H]