| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is lptG [H]
Identifier: 118581151
GI number: 118581151
Start: 3002981
End: 3004045
Strand: Direct
Name: lptG [H]
Synonym: Ppro_2744
Alternate gene names: 118581151
Gene position: 3002981-3004045 (Clockwise)
Preceding gene: 118581150
Following gene: 118581153
Centisome position: 74.92
GC content: 60.66
Gene sequence:
>1065_bases GTGAAGATTATCGATCGTTACCTGGGCCGCAGCTTTGCAAGCTGCTGGCTCAGCGTCAATCTGATTCTGGCCGGGCTGCT CAGTTTTTTCGAACTGGCCAAACAGCTGGACGACATCGGCAAGGGGCGCTACGACGTAAGCGACGCCCTGCTGTACGTGA GCCTGACACTTCCCGGACGCATGCTGGAGATGGCTCCACCCAGCGCTCTTTTGGGAAGCATTATCGCCTTGGGATTGCTG GCAAAGAACCAGGAACTGACCGCGCTGCGGGCGGGCGGGATATCCGTCCAGCGCATCGGCTGGACCTTCATGAAGCCCGC CGTTCTCACGCTGCTCGTTCTTCTGCTGGGAGCCCAGTTCATCATCCCCACCCTCGAACAGACCGCCTGGACCCGGCGCG AAACAGCTCTTTCGAAATCGGGAACGCTCCTGCCACGGGGCGGTTTCTGGACCAGAGACGAGCGGCGCTTCATCAACCTG CGGACCGCCCGGGACAACGGAGTACAGGCCGTGGATATCTACGAATTCGATAACCGGGATGCCCTGACCGGTTACATCCA TGGCAGGGAAACACGCATCGGAGCCAATGGAAACTGGGAACTGCACCATGTGCTGCGCAAGGAGATCACGGAACAGGGAG ATTCGGTCCGCGCACTGCCCAGGCTGGTCCTCCCCCACCTGCTCACCCCTCAACAGACAGCCGCACTGACGCTCCCCCCC CAGACCCTCTCCATTTCGGAGCTGTCAGGCACCATCAGCAACCTCCAGAAGAGGGAGCAGAATGCCGGGCGCTACCTGCT GGCGCTCTGGCAGAAGCTGACCCTGCCGGTGATTACGGCGGCAATGATAATGCTCTCCCTCCCCCTGGTATGCAGACCGG CCCGCAGCGCCAGCCTTGGCTGGCATATCATGATCGGTGCCATCTTCGGCGTGGTGTTCTTCTACCTCAACCAGATACTG GGTTACACCGGCCTTATCCTCCAGGTTTCTCCGTTCTGGACCACCCTCTTCCCCGCCCTGGCCGTTCTCGCCGGAGGCGC AATCCTGACGAGAAGAATCGTCTAA
Upstream 100 bases:
>100_bases CGCTGCTGAATGCCGGTCTGGTGCTGTTCCTGCTCCCCGTCCAGAGCCCCCTGCGGAAGCTCCGACTGCGCCGGGTCCGA ACCAGCGGAGGGGGAACGCC
Downstream 100 bases:
>100_bases CCGGCTGTTCTCCCGATCGCAGGTGCGGGCAGAAGCAGTTCCCGCTCCCGGGCTAGCACGAAGCGGCTTTCCCGGTGGGA GTAGATACGAACGCTCAGCA
Product: permease YjgP/YjgQ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKIIDRYLGRSFASCWLSVNLILAGLLSFFELAKQLDDIGKGRYDVSDALLYVSLTLPGRMLEMAPPSALLGSIIALGLL AKNQELTALRAGGISVQRIGWTFMKPAVLTLLVLLLGAQFIIPTLEQTAWTRRETALSKSGTLLPRGGFWTRDERRFINL RTARDNGVQAVDIYEFDNRDALTGYIHGRETRIGANGNWELHHVLRKEITEQGDSVRALPRLVLPHLLTPQQTAALTLPP QTLSISELSGTISNLQKREQNAGRYLLALWQKLTLPVITAAMIMLSLPLVCRPARSASLGWHIMIGAIFGVVFFYLNQIL GYTGLILQVSPFWTTLFPALAVLAGGAILTRRIV
Sequences:
>Translated_354_residues MKIIDRYLGRSFASCWLSVNLILAGLLSFFELAKQLDDIGKGRYDVSDALLYVSLTLPGRMLEMAPPSALLGSIIALGLL AKNQELTALRAGGISVQRIGWTFMKPAVLTLLVLLLGAQFIIPTLEQTAWTRRETALSKSGTLLPRGGFWTRDERRFINL RTARDNGVQAVDIYEFDNRDALTGYIHGRETRIGANGNWELHHVLRKEITEQGDSVRALPRLVLPHLLTPQQTAALTLPP QTLSISELSGTISNLQKREQNAGRYLLALWQKLTLPVITAAMIMLSLPLVCRPARSASLGWHIMIGAIFGVVFFYLNQIL GYTGLILQVSPFWTTLFPALAVLAGGAILTRRIV >Mature_354_residues MKIIDRYLGRSFASCWLSVNLILAGLLSFFELAKQLDDIGKGRYDVSDALLYVSLTLPGRMLEMAPPSALLGSIIALGLL AKNQELTALRAGGISVQRIGWTFMKPAVLTLLVLLLGAQFIIPTLEQTAWTRRETALSKSGTLLPRGGFWTRDERRFINL RTARDNGVQAVDIYEFDNRDALTGYIHGRETRIGANGNWELHHVLRKEITEQGDSVRALPRLVLPHLLTPQQTAALTLPP QTLSISELSGTISNLQKREQNAGRYLLALWQKLTLPVITAAMIMLSLPLVCRPARSASLGWHIMIGAIFGVVFFYLNQIL GYTGLILQVSPFWTTLFPALAVLAGGAILTRRIV
Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptF/lptG family [H]
Homologues:
Organism=Escherichia coli, GI87082400, Length=348, Percent_Identity=27.8735632183908, Blast_Score=132, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 39141; Mature: 39141
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIDRYLGRSFASCWLSVNLILAGLLSFFELAKQLDDIGKGRYDVSDALLYVSLTLPGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCH MLEMAPPSALLGSIIALGLLAKNQELTALRAGGISVQRIGWTFMKPAVLTLLVLLLGAQF HHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHCCHH IIPTLEQTAWTRRETALSKSGTLLPRGGFWTRDERRFINLRTARDNGVQAVDIYEFDNRD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCC ALTGYIHGRETRIGANGNWELHHVLRKEITEQGDSVRALPRLVLPHLLTPQQTAALTLPP CEEEEEECCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCC QTLSISELSGTISNLQKREQNAGRYLLALWQKLTLPVITAAMIMLSLPLVCRPARSASLG CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCC WHIMIGAIFGVVFFYLNQILGYTGLILQVSPFWTTLFPALAVLAGGAILTRRIV HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure MKIIDRYLGRSFASCWLSVNLILAGLLSFFELAKQLDDIGKGRYDVSDALLYVSLTLPGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCH MLEMAPPSALLGSIIALGLLAKNQELTALRAGGISVQRIGWTFMKPAVLTLLVLLLGAQF HHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHCCHH IIPTLEQTAWTRRETALSKSGTLLPRGGFWTRDERRFINLRTARDNGVQAVDIYEFDNRD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCC ALTGYIHGRETRIGANGNWELHHVLRKEITEQGDSVRALPRLVLPHLLTPQQTAALTLPP CEEEEEECCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCC QTLSISELSGTISNLQKREQNAGRYLLALWQKLTLPVITAAMIMLSLPLVCRPARSASLG CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCC WHIMIGAIFGVVFFYLNQILGYTGLILQVSPFWTTLFPALAVLAGGAILTRRIV HHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]