Click here to switch to the map view.

The map label for this gene is lptF [H]

Identifier: 118581150

GI number: 118581150

Start: 3001881

End: 3002984

Strand: Direct

Name: lptF [H]

Synonym: Ppro_2743

Alternate gene names: 118581150

Gene position: 3001881-3002984 (Clockwise)

Preceding gene: 118581149

Following gene: 118581151

Centisome position: 74.9

GC content: 61.14

Gene sequence:

>1104_bases
TTGATTATCGAACGTTACATAGTGCGTGAAATCTGCGCGCCCCTGGTGGTTATCTGCACGGTGCTGATCATGATCTTCTC
CGGCTTCAGCGCCGTCCGGTTCCTCAACGACGCCGTCAACGGCCTGCTCTCGGGCGGAACGGTCGTCGCCCTGGTCTCGC
TCAAGGTGTTGATCGCCCTGGAAGTCCTGATTCCTGTCACGCTCTATCTGGCCATCGTTCTCGCCCTCAGCCGTCTGTAT
GCCGATGGCGAGATCACGGCCATGGAGGCGGGCGGCCTCAGCCAGAAAAAGTTGATCAGCGCTGTTCTCTTCCTCGCCAT
TCTGCTTGCCCTTATGGTTACCGGACTTTCCCTCCATGCACGCCCCTGGGCCTACGGGAAGATGTATCTGCTGGAGACCA
GGGGGCAGAACGAGTTCGATATCGCCAAGGTGGAAGCCGGCCGGTTCTACGAACTCAGCCACAATCTGGTGTTCTTTGCC
GAAAAGCTCGACCCGGCCAGAAACCAAGCCCGTAATGTGTGGGTGTGGGAATTCGGACCGGAAAAGCGCAGGGTGACCAG
CGCCCGATCAGCATTCCAGACAAACGGCCCGGGCGAGGGGCAAAAGGCAATCGTCTTCCAGGAAGGCTCCCACTATAGCC
TGAACCTGAAAACCGGAACGGATCACCTGGTCGGGTTTCAGGAAAACGTGCTCCAGCTGGAACCGCCCCAAATCCCGCCC
GCAAAATACAGGCGCAAGGCGGCCTCCACGGAACATCTGGCCACGTCCACGGATCCGGCGGACATCGCGGAGCTGCAGTG
GCGCTTTTCCACCGGCATCTCCACCGTGCTGATGGCCCTGCTGGCGATCCCCTTGAGCCGGGTCGCTCCGCGGCGCGGCA
AATACGGCAAGGTGGTCGCGGCCATCATCCTCTTCTTCGTCATTTACAATCTGAGCCTGATCGCCAAGACCTGGGTTGAA
AAGCAGGTGGTGGGCGCCGTGCCCGGCATCTGGTGGGTCACGCTGCTGAATGCCGGTCTGGTGCTGTTCCTGCTCCCCGT
CCAGAGCCCCCTGCGGAAGCTCCGACTGCGCCGGGTCCGAACCAGCGGAGGGGGAACGCCGTGA

Upstream 100 bases:

>100_bases
TCATATTGTAGGTGCTTTTTTACTGCCTCATACTGCGGAAACCGCCGCCGTTGAGATTACCCGTCACGATGTTCACTGAC
CGCGAAAGACCGAGATTACG

Downstream 100 bases:

>100_bases
AGATTATCGATCGTTACCTGGGCCGCAGCTTTGCAAGCTGCTGGCTCAGCGTCAATCTGATTCTGGCCGGGCTGCTCAGT
TTTTTCGAACTGGCCAAACA

Product: permease YjgP/YjgQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MIIERYIVREICAPLVVICTVLIMIFSGFSAVRFLNDAVNGLLSGGTVVALVSLKVLIALEVLIPVTLYLAIVLALSRLY
ADGEITAMEAGGLSQKKLISAVLFLAILLALMVTGLSLHARPWAYGKMYLLETRGQNEFDIAKVEAGRFYELSHNLVFFA
EKLDPARNQARNVWVWEFGPEKRRVTSARSAFQTNGPGEGQKAIVFQEGSHYSLNLKTGTDHLVGFQENVLQLEPPQIPP
AKYRRKAASTEHLATSTDPADIAELQWRFSTGISTVLMALLAIPLSRVAPRRGKYGKVVAAIILFFVIYNLSLIAKTWVE
KQVVGAVPGIWWVTLLNAGLVLFLLPVQSPLRKLRLRRVRTSGGGTP

Sequences:

>Translated_367_residues
MIIERYIVREICAPLVVICTVLIMIFSGFSAVRFLNDAVNGLLSGGTVVALVSLKVLIALEVLIPVTLYLAIVLALSRLY
ADGEITAMEAGGLSQKKLISAVLFLAILLALMVTGLSLHARPWAYGKMYLLETRGQNEFDIAKVEAGRFYELSHNLVFFA
EKLDPARNQARNVWVWEFGPEKRRVTSARSAFQTNGPGEGQKAIVFQEGSHYSLNLKTGTDHLVGFQENVLQLEPPQIPP
AKYRRKAASTEHLATSTDPADIAELQWRFSTGISTVLMALLAIPLSRVAPRRGKYGKVVAAIILFFVIYNLSLIAKTWVE
KQVVGAVPGIWWVTLLNAGLVLFLLPVQSPLRKLRLRRVRTSGGGTP
>Mature_367_residues
MIIERYIVREICAPLVVICTVLIMIFSGFSAVRFLNDAVNGLLSGGTVVALVSLKVLIALEVLIPVTLYLAIVLALSRLY
ADGEITAMEAGGLSQKKLISAVLFLAILLALMVTGLSLHARPWAYGKMYLLETRGQNEFDIAKVEAGRFYELSHNLVFFA
EKLDPARNQARNVWVWEFGPEKRRVTSARSAFQTNGPGEGQKAIVFQEGSHYSLNLKTGTDHLVGFQENVLQLEPPQIPP
AKYRRKAASTEHLATSTDPADIAELQWRFSTGISTVLMALLAIPLSRVAPRRGKYGKVVAAIILFFVIYNLSLIAKTWVE
KQVVGAVPGIWWVTLLNAGLVLFLLPVQSPLRKLRLRRVRTSGGGTP

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=366, Percent_Identity=27.0491803278689, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40422; Mature: 40422

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIERYIVREICAPLVVICTVLIMIFSGFSAVRFLNDAVNGLLSGGTVVALVSLKVLIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EVLIPVTLYLAIVLALSRLYADGEITAMEAGGLSQKKLISAVLFLAILLALMVTGLSLHA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
RPWAYGKMYLLETRGQNEFDIAKVEAGRFYELSHNLVFFAEKLDPARNQARNVWVWEFGP
CCCCCCEEEEEEECCCCCCCEEEECCCCEEEECCCEEEEEHHCCHHHHHHCEEEEEECCC
EKRRVTSARSAFQTNGPGEGQKAIVFQEGSHYSLNLKTGTDHLVGFQENVLQLEPPQIPP
CHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCCHHCCHHHCCEEECCCCCCH
AKYRRKAASTEHLATSTDPADIAELQWRFSTGISTVLMALLAIPLSRVAPRRGKYGKVVA
HHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AIILFFVIYNLSLIAKTWVEKQVVGAVPGIWWVTLLNAGLVLFLLPVQSPLRKLRLRRVR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSGGGTP
CCCCCCC
>Mature Secondary Structure
MIIERYIVREICAPLVVICTVLIMIFSGFSAVRFLNDAVNGLLSGGTVVALVSLKVLIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EVLIPVTLYLAIVLALSRLYADGEITAMEAGGLSQKKLISAVLFLAILLALMVTGLSLHA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
RPWAYGKMYLLETRGQNEFDIAKVEAGRFYELSHNLVFFAEKLDPARNQARNVWVWEFGP
CCCCCCEEEEEEECCCCCCCEEEECCCCEEEECCCEEEEEHHCCHHHHHHCEEEEEECCC
EKRRVTSARSAFQTNGPGEGQKAIVFQEGSHYSLNLKTGTDHLVGFQENVLQLEPPQIPP
CHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCCHHCCHHHCCEEECCCCCCH
AKYRRKAASTEHLATSTDPADIAELQWRFSTGISTVLMALLAIPLSRVAPRRGKYGKVVA
HHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AIILFFVIYNLSLIAKTWVEKQVVGAVPGIWWVTLLNAGLVLFLLPVQSPLRKLRLRRVR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSGGGTP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]