| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is gntX [H]
Identifier: 118581139
GI number: 118581139
Start: 2987603
End: 2988340
Strand: Direct
Name: gntX [H]
Synonym: Ppro_2731
Alternate gene names: 118581139
Gene position: 2987603-2988340 (Clockwise)
Preceding gene: 118581138
Following gene: 118581140
Centisome position: 74.54
GC content: 64.91
Gene sequence:
>738_bases ATGCACGAGAAAAACCGGAAGTCGTTTTTCACTGCCCTACTGAATTTCCTCCTCCCCCCCCACTGCCACGTCTGCGGGGA GTTCATCCCCCGGGCCGGCAGGCTGCACATCTGCAGCTCCTGCCGGGAGCGAATGCCAGCTCCCACGCAACCGATCTGCC CGATCTGCGGCATCCCCTTCCAGGGAGCCGGCCATGACCACCCCTGCCAATCCTGCCTGAAGCATCCCCCCCACTTCCAC GCCGCCCGGGCCGCGCTGCTCCATGAGGGGCCGGTGCGCGACCTGATCCATGCGTTCAAGTACAACGCCAGGACCCACCT GCGCCGTCCCCTGGGGCTAGTGATCGTGGAGCAGTTGAGTGATTTCGTGACAGGGTGGCGGCCCGAGCTGATCATAGCGG TGCCGCTGCACGTAAGACGACTGCGCGGCCGGGGATTCAATCAGGCCCTGCTGCTGGCGGAGCTGCTGGCCAGGGAGTGG CGCATCCCGCTCCAGCGCCAGACTCTGCAACGGGTGCGCTGGACCGAACCGCAGATCAGCCTGACAGCCGGGCAGCGCCG GGAGAACGTCAGGGATGCCTTCAGGGTCAAAAACGCCTCCCTGGTGAGCGGTAAACGGGTGCTGCTGGTTGACGATGTGT TCACCACCGGCAGCACGGTGGAGGAATGCTCCAGAATCCTCATGCAGGCAGGAACAGGGGAGCTGCTGGTGGTAACCGTA TCCCGGGTGGCCGACTGA
Upstream 100 bases:
>100_bases AAATCAGGTCAATCAGGGTGATCAAATAATCGGGCGACGGTGCGCCGTCACCTGAAACACAGAGATGCCGGCTACGGCTG TCCGGTCGGGGGAGGAAGGG
Downstream 100 bases:
>100_bases AAGGAACGCGCGGCAAGGGAGAGAGGCGTTCGCAAGGCAGACGCTTTATTTTGTTGACAAAACAGGTGCATTTTCGTAAC TCTTCTGCTTGATGTAGCAC
Product: competence protein F
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MHEKNRKSFFTALLNFLLPPHCHVCGEFIPRAGRLHICSSCRERMPAPTQPICPICGIPFQGAGHDHPCQSCLKHPPHFH AARAALLHEGPVRDLIHAFKYNARTHLRRPLGLVIVEQLSDFVTGWRPELIIAVPLHVRRLRGRGFNQALLLAELLAREW RIPLQRQTLQRVRWTEPQISLTAGQRRENVRDAFRVKNASLVSGKRVLLVDDVFTTGSTVEECSRILMQAGTGELLVVTV SRVAD
Sequences:
>Translated_245_residues MHEKNRKSFFTALLNFLLPPHCHVCGEFIPRAGRLHICSSCRERMPAPTQPICPICGIPFQGAGHDHPCQSCLKHPPHFH AARAALLHEGPVRDLIHAFKYNARTHLRRPLGLVIVEQLSDFVTGWRPELIIAVPLHVRRLRGRGFNQALLLAELLAREW RIPLQRQTLQRVRWTEPQISLTAGQRRENVRDAFRVKNASLVSGKRVLLVDDVFTTGSTVEECSRILMQAGTGELLVVTV SRVAD >Mature_245_residues MHEKNRKSFFTALLNFLLPPHCHVCGEFIPRAGRLHICSSCRERMPAPTQPICPICGIPFQGAGHDHPCQSCLKHPPHFH AARAALLHEGPVRDLIHAFKYNARTHLRRPLGLVIVEQLSDFVTGWRPELIIAVPLHVRRLRGRGFNQALLLAELLAREW RIPLQRQTLQRVRWTEPQISLTAGQRRENVRDAFRVKNASLVSGKRVLLVDDVFTTGSTVEECSRILMQAGTGELLVVTV SRVAD
Specific function: Could be involved in gluconate metabolism [H]
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComF/GntX family [H]
Homologues:
Organism=Escherichia coli, GI87082263, Length=227, Percent_Identity=33.0396475770925, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005222 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 27693; Mature: 27693
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEKNRKSFFTALLNFLLPPHCHVCGEFIPRAGRLHICSSCRERMPAPTQPICPICGIPF CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC QGAGHDHPCQSCLKHPPHFHAARAALLHEGPVRDLIHAFKYNARTHLRRPLGLVIVEQLS CCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHH DFVTGWRPELIIAVPLHVRRLRGRGFNQALLLAELLAREWRIPLQRQTLQRVRWTEPQIS HHHCCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEE LTAGQRRENVRDAFRVKNASLVSGKRVLLVDDVFTTGSTVEECSRILMQAGTGELLVVTV ECCCHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEH SRVAD HHHCC >Mature Secondary Structure MHEKNRKSFFTALLNFLLPPHCHVCGEFIPRAGRLHICSSCRERMPAPTQPICPICGIPF CCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC QGAGHDHPCQSCLKHPPHFHAARAALLHEGPVRDLIHAFKYNARTHLRRPLGLVIVEQLS CCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHH DFVTGWRPELIIAVPLHVRRLRGRGFNQALLLAELLAREWRIPLQRQTLQRVRWTEPQIS HHHCCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEE LTAGQRRENVRDAFRVKNASLVSGKRVLLVDDVFTTGSTVEECSRILMQAGTGELLVVTV ECCCHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEH SRVAD HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]