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The map label for this gene is yfhP [C]

Identifier: 118581140

GI number: 118581140

Start: 2988460

End: 2988936

Strand: Direct

Name: yfhP [C]

Synonym: Ppro_2732

Alternate gene names: 118581140

Gene position: 2988460-2988936 (Clockwise)

Preceding gene: 118581139

Following gene: 118581142

Centisome position: 74.56

GC content: 61.43

Gene sequence:

>477_bases
ATGCGCCTGACAACCAAGAGCCGTTACGGTCTACGCGCCCTGTTCGACATAGCCTACAATTGCGGTACCGCGCCGGCCCA
AATCCAGGACATCTCGCGGCGCCAGGACATCTCCCCCCGCTACCTGGAGCAGATCTTCCAGAACCTGAAACGGGCAGGTA
TCCTGAAGAGCAAGCGTGGTCCCCAGGGGGGCTATTTCCTGGCCAGGAGCCCGGACAAGATTACGATCCTGGAGATTCTC
AACGCCACGGAACAGGATGTGCTGCTGGTGGAGTGCGCCGGCGCCACGGAGAAGAAGAGCAAACGCACGGGCGAATGCGC
CCAGGAGGGGAGTTGCGTCACCCAGACGGTGTGGGAAGAGGCCAGCGCCCTGCTGGGCGAACTCTTCTCCGGCATAACCC
TTCAGACCCTCTGCGAACGGGGTCAGGCCATGGGAGTCAAGCGGGAGGATGAGCACCGCTTCATGTACTACATCTGA

Upstream 100 bases:

>100_bases
AGAGAGGCGTTCGCAAGGCAGACGCTTTATTTTGTTGACAAAACAGGTGCATTTTCGTAACTCTTCTGCTTGATGTAGCA
CACCGCCACGGGAGGGAATC

Downstream 100 bases:

>100_bases
CCGCCGCCCGCGCACCCGAACCGGGCACATCCCCTGAGCCTATCCGTTTTCCGCCACACTCACCCTAAGCGACCTTCTCC
CCCCTACGGGGTGCGTTTAT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MRLTTKSRYGLRALFDIAYNCGTAPAQIQDISRRQDISPRYLEQIFQNLKRAGILKSKRGPQGGYFLARSPDKITILEIL
NATEQDVLLVECAGATEKKSKRTGECAQEGSCVTQTVWEEASALLGELFSGITLQTLCERGQAMGVKREDEHRFMYYI

Sequences:

>Translated_158_residues
MRLTTKSRYGLRALFDIAYNCGTAPAQIQDISRRQDISPRYLEQIFQNLKRAGILKSKRGPQGGYFLARSPDKITILEIL
NATEQDVLLVECAGATEKKSKRTGECAQEGSCVTQTVWEEASALLGELFSGITLQTLCERGQAMGVKREDEHRFMYYI
>Mature_158_residues
MRLTTKSRYGLRALFDIAYNCGTAPAQIQDISRRQDISPRYLEQIFQNLKRAGILKSKRGPQGGYFLARSPDKITILEIL
NATEQDVLLVECAGATEKKSKRTGECAQEGSCVTQTVWEEASALLGELFSGITLQTLCERGQAMGVKREDEHRFMYYI

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=153, Percent_Identity=33.9869281045752, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17772; Mature: 17772

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTTKSRYGLRALFDIAYNCGTAPAQIQDISRRQDISPRYLEQIFQNLKRAGILKSKRG
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
PQGGYFLARSPDKITILEILNATEQDVLLVECAGATEKKSKRTGECAQEGSCVTQTVWEE
CCCCEEEECCCCCEEHHHHHCCCCCCEEEEEECCCCCHHHHHCCCHHHCCCHHHHHHHHH
ASALLGELFSGITLQTLCERGQAMGVKREDEHRFMYYI
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEC
>Mature Secondary Structure
MRLTTKSRYGLRALFDIAYNCGTAPAQIQDISRRQDISPRYLEQIFQNLKRAGILKSKRG
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
PQGGYFLARSPDKITILEILNATEQDVLLVECAGATEKKSKRTGECAQEGSCVTQTVWEE
CCCCEEEECCCCCEEHHHHHCCCCCCEEEEEECCCCCHHHHHCCCHHHCCCHHHHHHHHH
ASALLGELFSGITLQTLCERGQAMGVKREDEHRFMYYI
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9582371 [H]