| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is pstS1 [H]
Identifier: 118581087
GI number: 118581087
Start: 2911586
End: 2912323
Strand: Direct
Name: pstS1 [H]
Synonym: Ppro_2676
Alternate gene names: 118581087
Gene position: 2911586-2912323 (Clockwise)
Preceding gene: 118581086
Following gene: 118581088
Centisome position: 72.64
GC content: 58.27
Gene sequence:
>738_bases ATGAAGAAAACGGCACTGTTGACCATGGCACTCGTGGCATCCCTCAGCCTGAACGCAGCGGCGGAAACGATCAGGCTGAA CGGCTCTTCCACCGTAACCAAGGCGGTAATGGCGAAGATCCAGGAGCCATTCAAGAGGGCGACCGGTATCGACCTGGCCA TTACCGGAAACGGCTCGGGCAACGGCGCCAAAGACCTGCTGGACGGCACATGCGATGCTGCCATGGCTTCGGAATCAATC ACCGACCTGGCGCTAAAGCTCCCTGCCCTCTCCGCGCCAGACATCAGAACGTTCGTGGTTGCTGAAGATGAAATCAAGGT CTTCGTCAACAGGGGAAACCCGGTGAACAGGCTCTCCAGAGAACAGATCAAGGGACTGCATACCGGAACGATCAAGAACT GGAAAGAGGTGGGCGGCCCGGACATGGAAGTCATCGTCGTGACCTCCCATAAAAACTCCGGCAACCGCGCGGCATTCCGC AGTATCGCCATGGATGGCGAGCCGTACACGAACGACGCCATCGAGGAGGCAACGGACATCGCCGAGATCAAGGAGGTGGC CACCATGAAGGAAGCCATATCAGCCATAGGTGTGGCATTCCTCGACGACAGCGTAAAGGTCGTGGAAGCCCCCAGGATGG CCCGCCAGCTCCTGCTCATCACCAAGGGCGAGCCGGGACCATCGGTCACAAAGCTCCTGGCGTTCATCAACAATGAGGGC TCCCGCTACATCAAATAG
Upstream 100 bases:
>100_bases AACAGAACCTCGCCATCATGGAGAACGAATCCAATCCATCGACGCGATGTTTACCGGCATCAACACCCACCACACACGAT AGAGTTTCCAAGGAGGAACG
Downstream 100 bases:
>100_bases GGACGCTTCCCCCACACCACCATTGCACAGCGCTCCGAAGCCATCCTGTCCGGCGCGGCATCCCCTCGCACCGCGAGCGG AACTTTTCCGACAAATCACT
Product: phosphate ABC transporter periplasmic phosphate-binding protein PstS
Products: NA
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKKTALLTMALVASLSLNAAAETIRLNGSSTVTKAVMAKIQEPFKRATGIDLAITGNGSGNGAKDLLDGTCDAAMASESI TDLALKLPALSAPDIRTFVVAEDEIKVFVNRGNPVNRLSREQIKGLHTGTIKNWKEVGGPDMEVIVVTSHKNSGNRAAFR SIAMDGEPYTNDAIEEATDIAEIKEVATMKEAISAIGVAFLDDSVKVVEAPRMARQLLLITKGEPGPSVTKLLAFINNEG SRYIK
Sequences:
>Translated_245_residues MKKTALLTMALVASLSLNAAAETIRLNGSSTVTKAVMAKIQEPFKRATGIDLAITGNGSGNGAKDLLDGTCDAAMASESI TDLALKLPALSAPDIRTFVVAEDEIKVFVNRGNPVNRLSREQIKGLHTGTIKNWKEVGGPDMEVIVVTSHKNSGNRAAFR SIAMDGEPYTNDAIEEATDIAEIKEVATMKEAISAIGVAFLDDSVKVVEAPRMARQLLLITKGEPGPSVTKLLAFINNEG SRYIK >Mature_245_residues MKKTALLTMALVASLSLNAAAETIRLNGSSTVTKAVMAKIQEPFKRATGIDLAITGNGSGNGAKDLLDGTCDAAMASESI TDLALKLPALSAPDIRTFVVAEDEIKVFVNRGNPVNRLSREQIKGLHTGTIKNWKEVGGPDMEVIVVTSHKNSGNRAAFR SIAMDGEPYTNDAIEEATDIAEIKEVATMKEAISAIGVAFLDDSVKVVEAPRMARQLLLITKGEPGPSVTKLLAFINNEG SRYIK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26053; Mature: 26053
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTALLTMALVASLSLNAAAETIRLNGSSTVTKAVMAKIQEPFKRATGIDLAITGNGSG CCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC NGAKDLLDGTCDAAMASESITDLALKLPALSAPDIRTFVVAEDEIKVFVNRGNPVNRLSR CCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHH EQIKGLHTGTIKNWKEVGGPDMEVIVVTSHKNSGNRAAFRSIAMDGEPYTNDAIEEATDI HHHCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHH AEIKEVATMKEAISAIGVAFLDDSVKVVEAPRMARQLLLITKGEPGPSVTKLLAFINNEG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCC SRYIK CCCCC >Mature Secondary Structure MKKTALLTMALVASLSLNAAAETIRLNGSSTVTKAVMAKIQEPFKRATGIDLAITGNGSG CCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC NGAKDLLDGTCDAAMASESITDLALKLPALSAPDIRTFVVAEDEIKVFVNRGNPVNRLSR CCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHH EQIKGLHTGTIKNWKEVGGPDMEVIVVTSHKNSGNRAAFRSIAMDGEPYTNDAIEEATDI HHHCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHH AEIKEVATMKEAISAIGVAFLDDSVKVVEAPRMARQLLLITKGEPGPSVTKLLAFINNEG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCC SRYIK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]