| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is tar [C]
Identifier: 118581088
GI number: 118581088
Start: 2912492
End: 2914948
Strand: Direct
Name: tar [C]
Synonym: Ppro_2677
Alternate gene names: 118581088
Gene position: 2912492-2914948 (Clockwise)
Preceding gene: 118581087
Following gene: 118581091
Centisome position: 72.67
GC content: 60.48
Gene sequence:
>2457_bases ATGACCATACGAACCAAGCTCACCCTGAACGTGACGGTCGTCGTTGCCATAGTTGCCATCTACGCTGCCGTCAGCATCAT CGGCCTCGGCCTGATTCGCGGGAAGGTCGGCTATCTGCTGCAGAACAGCACGCCATTCCAGATCAGAACCACCGAACTGC AGCGGGCGCTCCAGGCCAGTGTCGCCGACCTGGTAAAGGTAAGCGCATCATCCTCTTCCGATGAATTCGCACGCTTCAAA GGCCTCTCATCCCAATCGCTGAACGAGGTACTCAGCGCGGAAGAGGCGCTCTCTGCACTTTCCGGAAAGAAGCGCGGACT CTCTACGGAGCTGAACCACATGTCCGACCAGGTTAGGGGCATCACGGAGAAACGCCTGCGGGCGGAAAGGGATGTAACGG AATCCCACAGGGTGATCACCGAGCGCAGCAGAGAGATGGCAGCAGGGTTGCGCGAACTGGCCCGTCGTGTCACGGCACTC CAGTCATCGTATTCACGGGTGTTCGTGAACGCCTTCGGCTCCTCCAAGAGCAACAACAGCAGGCTCAGGGAGATGGAAAA CCTGAAATCATCCCTGGAACAGTTGCAGACCTATCTCCTCACCGTCCAGACGGCAAAGGAGAAACGGCAGCTGACAATTC TGAAGAGCAGGCTGAACGGTATTGTGGACAATTTTCTCGATAACCGGCTGGTGAAGGAATCGGCTGAGCTGACCTCGGCG GGAAGAGGCATCAAACAGAAACTGCCCAGCCTGCTGGATGCCCATGCCACCGTGCTTGCCAGACAGGATGAGGCCAGCCG TCAGCAGTACGACACGTTACTGGTGGAACTGAAGGATCGCACCATCGGCACACTGCTCCTGAACTTCGACCTGGCGGTCT CATCCGCCTCCAAAGAGGCCAGCTCCGCCAATCACCGCCAGGACAGCGCATTCTCCCAGTCCGCGGCATCCGTGGACATC CTCGCCAACAACAGCGCCCTGTCTGCGGCAGGACTCTCCATCGACGGCCTGGCCTCCCGCCTCTTCACCGCGTCGTCCCC AGAGGAGGTGGACCGGATCGAGGCGGAGATACGCTCCCTCCTCGGCCAGGTCTCCCAGCACCGGAGAGCCCTGGAACAGG GATTGGGCAAGATAGGCGCCAGGGCTGAGATCAGTCTGCTCCATCGCGCGTCATCTTCGCTCCAGAACATGCGCGACCTC CTGATTAGGCAGGAGGGGGTGATAGCCAAGGTGCGGCTGCAGCTGGAGATGAAGCAGAGCGCCCTGCAGGTCAACGACAG ACTGCGCGACATGGTCATCGGCTATGCGACCGATGGCAGGGAAACGGTGCTGGCGGCCCACAGGGAGCAGGAAAAGGCCG GCAGGGACGTGAACGCCATCCTGCGGCTGAGCATCCTGATGAACGTCGTCGTCGGAGCAGTGGTAATCATCATCAGCAGC ATCTCGGGAGTCGCCCTCTACCGGACAATCGTGAAACCGGTCACCTCGGCCAGCAACGCCCTGGAAAACGCCGAAAAGAG CAACGACCTCCGGGCACGCTTTACCGCGGCGCGCGAGGACGAAATCGGCGTCATGTGCAGGGCATACAACAGCTTCATGG AACGGGTGCATGGTGCTGTCTGCCAGATCTCCGATTTCACCGGCCATGTGGATTCAGCCTCGGATGCGCTCTTCCGCTCA TCCCGCTCCATGGCCGGACAGGCCAAGACCCAGGCCGAGCAGGCAACCGCCATAGCCACGGCAGCGGAACAGATGTCCGC CACCAGCAACGACATGGCGCAGAACACCCAATCCGCGGCTGATTTCGCCCAAGGGCTTAAAGAGACGGCGCTCCAGGGAA ATGACGTCGTACAACAGGCGATCGCAGGCATCACGACCGTTACCCTTTCCATCGGGGAGGTGACCAGGGCGATGGAGCGC CTGACGCTGAGTTCGGAAAAAATCGGAGACATCGTATCGGTGATTGAGGAGATAGCCGACCAGACCAATCTGCTGGCGCT GAACGCAGCCATCGAGGCGGCACGGGCGGGGGAGCATGGGAGGGGGTTCGCGGTGGTTGCCAGCGAGGTCAAGAAACTGG CCACGAAAACCGGGGACTCCACGCGGGAAATCGCCGACATGGTTCTCGCCATGCAGGCCGAGACAGCACAGGTGGGCCTT TCCATGGAGAGGAGCGCCGCCGACGTAGATTCGGGAGTGGTACTCACCAACCGGGCGGGAGAGGCTTTGATGAAGATTGT CGGGCAGGTGGAAAAGGTCACCGAAATGATCGGCATGATGGCCAGCGCATCCCGGGAACAGTCATTAACGGCCACAACCA TCACAACCACCATAAGCCACATATCCAGCGCCGTCGTGGAATCAGCCTCTTCCCTGACGCACAATTCAGCGGCAGCGGAG CGGTTATCGGGACTGGCGGCCCAACTTCAGACCCAGGTCGCGGGCTTCAGGCTCTAG
Upstream 100 bases:
>100_bases CACCGCGAGCGGAACTTTTCCGACAAATCACTGAAATACGACAGAGGCGGGGAAAGACCTCCCCGCCTTTCCAGACCTAC TCCATTGCCCAGGAATATCC
Downstream 100 bases:
>100_bases ACGGCTGCCCCCAGCCGCTCCAGCGCGCATTCCTGGCGATTCACGCACCCCACCCCGAAAACATTTTCTCCTGGGGGATA TACTGTGAATATGAGGAGGG
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 818; Mature: 817
Protein sequence:
>818_residues MTIRTKLTLNVTVVVAIVAIYAAVSIIGLGLIRGKVGYLLQNSTPFQIRTTELQRALQASVADLVKVSASSSSDEFARFK GLSSQSLNEVLSAEEALSALSGKKRGLSTELNHMSDQVRGITEKRLRAERDVTESHRVITERSREMAAGLRELARRVTAL QSSYSRVFVNAFGSSKSNNSRLREMENLKSSLEQLQTYLLTVQTAKEKRQLTILKSRLNGIVDNFLDNRLVKESAELTSA GRGIKQKLPSLLDAHATVLARQDEASRQQYDTLLVELKDRTIGTLLLNFDLAVSSASKEASSANHRQDSAFSQSAASVDI LANNSALSAAGLSIDGLASRLFTASSPEEVDRIEAEIRSLLGQVSQHRRALEQGLGKIGARAEISLLHRASSSLQNMRDL LIRQEGVIAKVRLQLEMKQSALQVNDRLRDMVIGYATDGRETVLAAHREQEKAGRDVNAILRLSILMNVVVGAVVIIISS ISGVALYRTIVKPVTSASNALENAEKSNDLRARFTAAREDEIGVMCRAYNSFMERVHGAVCQISDFTGHVDSASDALFRS SRSMAGQAKTQAEQATAIATAAEQMSATSNDMAQNTQSAADFAQGLKETALQGNDVVQQAIAGITTVTLSIGEVTRAMER LTLSSEKIGDIVSVIEEIADQTNLLALNAAIEAARAGEHGRGFAVVASEVKKLATKTGDSTREIADMVLAMQAETAQVGL SMERSAADVDSGVVLTNRAGEALMKIVGQVEKVTEMIGMMASASREQSLTATTITTTISHISSAVVESASSLTHNSAAAE RLSGLAAQLQTQVAGFRL
Sequences:
>Translated_818_residues MTIRTKLTLNVTVVVAIVAIYAAVSIIGLGLIRGKVGYLLQNSTPFQIRTTELQRALQASVADLVKVSASSSSDEFARFK GLSSQSLNEVLSAEEALSALSGKKRGLSTELNHMSDQVRGITEKRLRAERDVTESHRVITERSREMAAGLRELARRVTAL QSSYSRVFVNAFGSSKSNNSRLREMENLKSSLEQLQTYLLTVQTAKEKRQLTILKSRLNGIVDNFLDNRLVKESAELTSA GRGIKQKLPSLLDAHATVLARQDEASRQQYDTLLVELKDRTIGTLLLNFDLAVSSASKEASSANHRQDSAFSQSAASVDI LANNSALSAAGLSIDGLASRLFTASSPEEVDRIEAEIRSLLGQVSQHRRALEQGLGKIGARAEISLLHRASSSLQNMRDL LIRQEGVIAKVRLQLEMKQSALQVNDRLRDMVIGYATDGRETVLAAHREQEKAGRDVNAILRLSILMNVVVGAVVIIISS ISGVALYRTIVKPVTSASNALENAEKSNDLRARFTAAREDEIGVMCRAYNSFMERVHGAVCQISDFTGHVDSASDALFRS SRSMAGQAKTQAEQATAIATAAEQMSATSNDMAQNTQSAADFAQGLKETALQGNDVVQQAIAGITTVTLSIGEVTRAMER LTLSSEKIGDIVSVIEEIADQTNLLALNAAIEAARAGEHGRGFAVVASEVKKLATKTGDSTREIADMVLAMQAETAQVGL SMERSAADVDSGVVLTNRAGEALMKIVGQVEKVTEMIGMMASASREQSLTATTITTTISHISSAVVESASSLTHNSAAAE RLSGLAAQLQTQVAGFRL >Mature_817_residues TIRTKLTLNVTVVVAIVAIYAAVSIIGLGLIRGKVGYLLQNSTPFQIRTTELQRALQASVADLVKVSASSSSDEFARFKG LSSQSLNEVLSAEEALSALSGKKRGLSTELNHMSDQVRGITEKRLRAERDVTESHRVITERSREMAAGLRELARRVTALQ SSYSRVFVNAFGSSKSNNSRLREMENLKSSLEQLQTYLLTVQTAKEKRQLTILKSRLNGIVDNFLDNRLVKESAELTSAG RGIKQKLPSLLDAHATVLARQDEASRQQYDTLLVELKDRTIGTLLLNFDLAVSSASKEASSANHRQDSAFSQSAASVDIL ANNSALSAAGLSIDGLASRLFTASSPEEVDRIEAEIRSLLGQVSQHRRALEQGLGKIGARAEISLLHRASSSLQNMRDLL IRQEGVIAKVRLQLEMKQSALQVNDRLRDMVIGYATDGRETVLAAHREQEKAGRDVNAILRLSILMNVVVGAVVIIISSI SGVALYRTIVKPVTSASNALENAEKSNDLRARFTAAREDEIGVMCRAYNSFMERVHGAVCQISDFTGHVDSASDALFRSS RSMAGQAKTQAEQATAIATAAEQMSATSNDMAQNTQSAADFAQGLKETALQGNDVVQQAIAGITTVTLSIGEVTRAMERL TLSSEKIGDIVSVIEEIADQTNLLALNAAIEAARAGEHGRGFAVVASEVKKLATKTGDSTREIADMVLAMQAETAQVGLS MERSAADVDSGVVLTNRAGEALMKIVGQVEKVTEMIGMMASASREQSLTATTITTTISHISSAVVESASSLTHNSAAAER LSGLAAQLQTQVAGFRL
Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=284, Percent_Identity=37.3239436619718, Blast_Score=140, Evalue=3e-34, Organism=Escherichia coli, GI1788194, Length=458, Percent_Identity=28.82096069869, Blast_Score=135, Evalue=1e-32, Organism=Escherichia coli, GI2367378, Length=353, Percent_Identity=30.8781869688385, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1787690, Length=358, Percent_Identity=33.2402234636872, Blast_Score=127, Evalue=4e-30, Organism=Escherichia coli, GI1789453, Length=306, Percent_Identity=29.0849673202614, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003018 - InterPro: IPR003660 - InterPro: IPR016132 [H]
Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 87830; Mature: 87699
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRTKLTLNVTVVVAIVAIYAAVSIIGLGLIRGKVGYLLQNSTPFQIRTTELQRALQAS CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHH VADLVKVSASSSSDEFARFKGLSSQSLNEVLSAEEALSALSGKKRGLSTELNHMSDQVRG HHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ITEKRLRAERDVTESHRVITERSREMAAGLRELARRVTALQSSYSRVFVNAFGSSKSNNS HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH RLREMENLKSSLEQLQTYLLTVQTAKEKRQLTILKSRLNGIVDNFLDNRLVKESAELTSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRGIKQKLPSLLDAHATVLARQDEASRQQYDTLLVELKDRTIGTLLLNFDLAVSSASKEA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHEEHEEEHHHHHCCCHHHH SSANHRQDSAFSQSAASVDILANNSALSAAGLSIDGLASRLFTASSPEEVDRIEAEIRSL HCCCCCHHHHHHHCCCEEEEEECCCCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH LGQVSQHRRALEQGLGKIGARAEISLLHRASSSLQNMRDLLIRQEGVIAKVRLQLEMKQS HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH ALQVNDRLRDMVIGYATDGRETVLAAHREQEKAGRDVNAILRLSILMNVVVGAVVIIISS HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ISGVALYRTIVKPVTSASNALENAEKSNDLRARFTAAREDEIGVMCRAYNSFMERVHGAV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH CQISDFTGHVDSASDALFRSSRSMAGQAKTQAEQATAIATAAEQMSATSNDMAQNTQSAA EEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DFAQGLKETALQGNDVVQQAIAGITTVTLSIGEVTRAMERLTLSSEKIGDIVSVIEEIAD HHHHHHHHHHCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC QTNLLALNAAIEAARAGEHGRGFAVVASEVKKLATKTGDSTREIADMVLAMQAETAQVGL CCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC SMERSAADVDSGVVLTNRAGEALMKIVGQVEKVTEMIGMMASASREQSLTATTITTTISH CHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH ISSAVVESASSLTHNSAAAERLSGLAAQLQTQVAGFRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TIRTKLTLNVTVVVAIVAIYAAVSIIGLGLIRGKVGYLLQNSTPFQIRTTELQRALQAS CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHH VADLVKVSASSSSDEFARFKGLSSQSLNEVLSAEEALSALSGKKRGLSTELNHMSDQVRG HHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH ITEKRLRAERDVTESHRVITERSREMAAGLRELARRVTALQSSYSRVFVNAFGSSKSNNS HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH RLREMENLKSSLEQLQTYLLTVQTAKEKRQLTILKSRLNGIVDNFLDNRLVKESAELTSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRGIKQKLPSLLDAHATVLARQDEASRQQYDTLLVELKDRTIGTLLLNFDLAVSSASKEA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHEEHEEEHHHHHCCCHHHH SSANHRQDSAFSQSAASVDILANNSALSAAGLSIDGLASRLFTASSPEEVDRIEAEIRSL HCCCCCHHHHHHHCCCEEEEEECCCCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH LGQVSQHRRALEQGLGKIGARAEISLLHRASSSLQNMRDLLIRQEGVIAKVRLQLEMKQS HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH ALQVNDRLRDMVIGYATDGRETVLAAHREQEKAGRDVNAILRLSILMNVVVGAVVIIISS HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ISGVALYRTIVKPVTSASNALENAEKSNDLRARFTAAREDEIGVMCRAYNSFMERVHGAV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH CQISDFTGHVDSASDALFRSSRSMAGQAKTQAEQATAIATAAEQMSATSNDMAQNTQSAA EEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH DFAQGLKETALQGNDVVQQAIAGITTVTLSIGEVTRAMERLTLSSEKIGDIVSVIEEIAD HHHHHHHHHHCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC QTNLLALNAAIEAARAGEHGRGFAVVASEVKKLATKTGDSTREIADMVLAMQAETAQVGL CCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC SMERSAADVDSGVVLTNRAGEALMKIVGQVEKVTEMIGMMASASREQSLTATTITTTISH CHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH ISSAVVESASSLTHNSAAAERLSGLAAQLQTQVAGFRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]