| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581067
Identifier: 118581067
GI number: 118581067
Start: 2890021
End: 2891727
Strand: Reverse
Name: 118581067
Synonym: Ppro_2656
Alternate gene names: NA
Gene position: 2891727-2890021 (Counterclockwise)
Preceding gene: 118581081
Following gene: 118581066
Centisome position: 72.15
GC content: 50.03
Gene sequence:
>1707_bases ATGAAATACGTCCTGAGCATGCTTTTCTGCGCCACAATGCTTTCCTCATGCGCCACCTTTGGTGAATATGCGCCTTCTAC TCCCTCCCTGTCATCTCCTGCTTATGACGCCTACTCCCGAGCCCTGTATCTCTACTCGCGCTCCAGGCTGGCAAGCCTGG AGGGGGAGTATGCCCTTGCCCTGAACTGCCTGCGGGAGGCAATCGAACAGGACCCTTCTTCCGCTTTTCTGTATTCAGCG ATGGCCGAGAACAAACTTAAGATCGGCCAGGTTCAGGAAGCTTTGGAGAATATCAACAGGGCCATCAAACAGGACCCGTC CTTTCGTGAGCCATATGTCATGGCCGGCGTTTTGATGGCCTCTGCAGGCAAGGATACCGAGGCGGTCGGTTATCTCCGTA CGGCAATCCAGTTGGACCCGTCCAAGGAGGACGCCTATCTTCATCTGGCGGTCTCGTTGACAAGGATGTTTGAATATGAA GAGGCGGTAACTACCCTCAAGTCGCTTGTGAAACAGAACCCCGAATCGGTGTTGGGATACTACTATCTCGGCCGTTCCTA TAGCCAGATGAAACTCTATCGCGATGCCGTTGGCTATTTCAAGAAGAGTATTGAGCTTCGCCCTGAATTCAGCCAGGCTG CCATCGACATGGCTGCCTCGTACGAGGCGCTCGGTGACTATACCAAGGCCATTGAAATCTATCACGATCTTCTGGATGAA GACGAGAGTCGTACCGCAGTTCAGCAGCGCCTGATTCAGCTTTTGATCCAGCAGCGCAGGTTTCAGGAGGCTCTTGAGTA TTTGAACCAGTCCGCTGGGTCCGGTTTGAGCAGTGCCGAAACCATGAGAAAAATCGGCTTAATCCACCTTGAACTGGAAC AATATGACGAGGCCATTGCCGTTTTTAACGATCTGCTGGAAAAAGATCCCTCTGCCCATCATGTCAGGCTCTACCTGGGG GTGGCATATGAGGAAAAGGGGGATCTGGATCGCGCCAAGGCAGAATTTTTGAAAATTCCCTCTGATTCCAGTGTATATAC CGACGCCGTAGGCCATATTGCCTTTATCTTTTCGGAAAGAGGCCAAAACGATGCCGCCGTGGATATCCTGAAAAATTCGA TTGCGCACAATCCCGCGCAGATTGAGCCATATCTCAATCTGTCTACCATTTATGAGAAACTCGATAAATCCGAAACCGCT TTAAGCTTGCTCCTTGATTGCGAAAAACGCTTTGAGAATGAACCGCGCCTACACTTTCGAATCGGTGTGTTATATGACAC GTTGGGCAAAAAACGGGATTCAATTGAACGCATGAAAAAGGTGCTCAGCATCAACCCAAGGGATGCACAGGCTCTCAATT ATCTGGGTTATACTTATGCTGAAATGGGAGTGAATCTTGATGAGGCACTGGGATTCCTCAAACAGGCGGTTGAGATCCGT CCAAACGATGGCTTCATTCTGGATAGCCTCGGCTGGATATACTATAAAATGAAGAAATATGATGAGGCTGTCAGATGGCT TGAGAAAGCCAGTCGTCTTGCTGATGATGATTCAACCATTATTGAACACCTCGGTGATGCTTATCTGGCCCAGCGCGATT TTAAGAAGGCCTTAAATGCATATAAGCGGGCGCAGGAGCTTGATCCGAGCCGCAAGGAGCTGACCGAAAAGATTCGCAAG CTCAAAGGGGAGCTGGGTGAACGATGA
Upstream 100 bases:
>100_bases CTCAACCGCAAGCTCTTGAACATCATGATATTCATTTGACGAGGCTATGGTTTCATGTTAGCTTTTGTTATAATTTTTCG AGAAATGGATCGACTTTACA
Downstream 100 bases:
>100_bases GGTGGCTCTTGCATTGCGGGTGCCTTGTTGCCGTTCTATTTCTGGTTTCCTGTCAGCAGGAAGTGCCCAAGAGAGTAAGC TCTTCGGCTACGGATGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MKYVLSMLFCATMLSSCATFGEYAPSTPSLSSPAYDAYSRALYLYSRSRLASLEGEYALALNCLREAIEQDPSSAFLYSA MAENKLKIGQVQEALENINRAIKQDPSFREPYVMAGVLMASAGKDTEAVGYLRTAIQLDPSKEDAYLHLAVSLTRMFEYE EAVTTLKSLVKQNPESVLGYYYLGRSYSQMKLYRDAVGYFKKSIELRPEFSQAAIDMAASYEALGDYTKAIEIYHDLLDE DESRTAVQQRLIQLLIQQRRFQEALEYLNQSAGSGLSSAETMRKIGLIHLELEQYDEAIAVFNDLLEKDPSAHHVRLYLG VAYEEKGDLDRAKAEFLKIPSDSSVYTDAVGHIAFIFSERGQNDAAVDILKNSIAHNPAQIEPYLNLSTIYEKLDKSETA LSLLLDCEKRFENEPRLHFRIGVLYDTLGKKRDSIERMKKVLSINPRDAQALNYLGYTYAEMGVNLDEALGFLKQAVEIR PNDGFILDSLGWIYYKMKKYDEAVRWLEKASRLADDDSTIIEHLGDAYLAQRDFKKALNAYKRAQELDPSRKELTEKIRK LKGELGER
Sequences:
>Translated_568_residues MKYVLSMLFCATMLSSCATFGEYAPSTPSLSSPAYDAYSRALYLYSRSRLASLEGEYALALNCLREAIEQDPSSAFLYSA MAENKLKIGQVQEALENINRAIKQDPSFREPYVMAGVLMASAGKDTEAVGYLRTAIQLDPSKEDAYLHLAVSLTRMFEYE EAVTTLKSLVKQNPESVLGYYYLGRSYSQMKLYRDAVGYFKKSIELRPEFSQAAIDMAASYEALGDYTKAIEIYHDLLDE DESRTAVQQRLIQLLIQQRRFQEALEYLNQSAGSGLSSAETMRKIGLIHLELEQYDEAIAVFNDLLEKDPSAHHVRLYLG VAYEEKGDLDRAKAEFLKIPSDSSVYTDAVGHIAFIFSERGQNDAAVDILKNSIAHNPAQIEPYLNLSTIYEKLDKSETA LSLLLDCEKRFENEPRLHFRIGVLYDTLGKKRDSIERMKKVLSINPRDAQALNYLGYTYAEMGVNLDEALGFLKQAVEIR PNDGFILDSLGWIYYKMKKYDEAVRWLEKASRLADDDSTIIEHLGDAYLAQRDFKKALNAYKRAQELDPSRKELTEKIRK LKGELGER >Mature_568_residues MKYVLSMLFCATMLSSCATFGEYAPSTPSLSSPAYDAYSRALYLYSRSRLASLEGEYALALNCLREAIEQDPSSAFLYSA MAENKLKIGQVQEALENINRAIKQDPSFREPYVMAGVLMASAGKDTEAVGYLRTAIQLDPSKEDAYLHLAVSLTRMFEYE EAVTTLKSLVKQNPESVLGYYYLGRSYSQMKLYRDAVGYFKKSIELRPEFSQAAIDMAASYEALGDYTKAIEIYHDLLDE DESRTAVQQRLIQLLIQQRRFQEALEYLNQSAGSGLSSAETMRKIGLIHLELEQYDEAIAVFNDLLEKDPSAHHVRLYLG VAYEEKGDLDRAKAEFLKIPSDSSVYTDAVGHIAFIFSERGQNDAAVDILKNSIAHNPAQIEPYLNLSTIYEKLDKSETA LSLLLDCEKRFENEPRLHFRIGVLYDTLGKKRDSIERMKKVLSINPRDAQALNYLGYTYAEMGVNLDEALGFLKQAVEIR PNDGFILDSLGWIYYKMKKYDEAVRWLEKASRLADDDSTIIEHLGDAYLAQRDFKKALNAYKRAQELDPSRKELTEKIRK LKGELGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=387, Percent_Identity=23.2558139534884, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI32307148, Length=387, Percent_Identity=23.2558139534884, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI28329439, Length=438, Percent_Identity=21.4611872146119, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI28558993, Length=438, Percent_Identity=21.4611872146119, Blast_Score=67, Evalue=6e-11, Organism=Caenorhabditis elegans, GI115532690, Length=388, Percent_Identity=23.7113402061856, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115532692, Length=450, Percent_Identity=22.6666666666667, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI17647755, Length=416, Percent_Identity=23.0769230769231, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24585827, Length=416, Percent_Identity=23.0769230769231, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24585829, Length=416, Percent_Identity=23.0769230769231, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI19920486, Length=364, Percent_Identity=25.5494505494505, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI161076610, Length=364, Percent_Identity=25.5494505494505, Blast_Score=72, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 64455; Mature: 64455
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00226 IF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVLSMLFCATMLSSCATFGEYAPSTPSLSSPAYDAYSRALYLYSRSRLASLEGEYALA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH LNCLREAIEQDPSSAFLYSAMAENKLKIGQVQEALENINRAIKQDPSFREPYVMAGVLMA HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH SAGKDTEAVGYLRTAIQLDPSKEDAYLHLAVSLTRMFEYEEAVTTLKSLVKQNPESVLGY CCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH YYLGRSYSQMKLYRDAVGYFKKSIELRPEFSQAAIDMAASYEALGDYTKAIEIYHDLLDE HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DESRTAVQQRLIQLLIQQRRFQEALEYLNQSAGSGLSSAETMRKIGLIHLELEQYDEAIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEHHHHHHHHH VFNDLLEKDPSAHHVRLYLGVAYEEKGDLDRAKAEFLKIPSDSSVYTDAVGHIAFIFSER HHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC GQNDAAVDILKNSIAHNPAQIEPYLNLSTIYEKLDKSETALSLLLDCEKRFENEPRLHFR CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEE IGVLYDTLGKKRDSIERMKKVLSINPRDAQALNYLGYTYAEMGVNLDEALGFLKQAVEIR EHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC PNDGFILDSLGWIYYKMKKYDEAVRWLEKASRLADDDSTIIEHLGDAYLAQRDFKKALNA CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH YKRAQELDPSRKELTEKIRKLKGELGER HHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKYVLSMLFCATMLSSCATFGEYAPSTPSLSSPAYDAYSRALYLYSRSRLASLEGEYALA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH LNCLREAIEQDPSSAFLYSAMAENKLKIGQVQEALENINRAIKQDPSFREPYVMAGVLMA HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH SAGKDTEAVGYLRTAIQLDPSKEDAYLHLAVSLTRMFEYEEAVTTLKSLVKQNPESVLGY CCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH YYLGRSYSQMKLYRDAVGYFKKSIELRPEFSQAAIDMAASYEALGDYTKAIEIYHDLLDE HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DESRTAVQQRLIQLLIQQRRFQEALEYLNQSAGSGLSSAETMRKIGLIHLELEQYDEAIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEHHHHHHHHH VFNDLLEKDPSAHHVRLYLGVAYEEKGDLDRAKAEFLKIPSDSSVYTDAVGHIAFIFSER HHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC GQNDAAVDILKNSIAHNPAQIEPYLNLSTIYEKLDKSETALSLLLDCEKRFENEPRLHFR CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEE IGVLYDTLGKKRDSIERMKKVLSINPRDAQALNYLGYTYAEMGVNLDEALGFLKQAVEIR EHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC PNDGFILDSLGWIYYKMKKYDEAVRWLEKASRLADDDSTIIEHLGDAYLAQRDFKKALNA CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH YKRAQELDPSRKELTEKIRKLKGELGER HHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883699; 10984043 [H]