| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is dctB [H]
Identifier: 118580852
GI number: 118580852
Start: 2636201
End: 2638273
Strand: Reverse
Name: dctB [H]
Synonym: Ppro_2439
Alternate gene names: 118580852
Gene position: 2638273-2636201 (Counterclockwise)
Preceding gene: 118580853
Following gene: 118580851
Centisome position: 65.83
GC content: 61.89
Gene sequence:
>2073_bases ATGCTGGACTCGGTCATCACCATCGCGGCCATTGTTGCCCTGCTGTTTGCCGCGGGATACGCCCTGCACCGGGAACGCTC CCGCGCCGGCCTGTTTCTCTGCGGCGCGCTGCTGCTGACCGCCCTTTTGGAGCTGTTCGACCTCTTGTCCCTCAGCCTGC CTCAGGCTGCCGTGCCGTGGAAATGGTTCTCGCTTGTGGCCGAATCCCTGCTCCCCTTCTTCTGGATCATGTGCAGCCTG ACCTACGCCCGTCAGGCCGCCCCCTGGAGGTTCGGCCCGCTGCTCAAGGGAGTGATCGCCCTTTCCCTGCTCTTCTGTCT GCTCCCCTTTGCCGTTCCCCTGGACTCATTCTTCTACGCCCCTGATTTCCCGCTGGAGCGGCTGCTCTTCCTGGGGAATG TCGGCTACTTCTACTACCTGGGGCTCATGGCTGCCCTGATATTCGCCCTGGTCAACTTTGAGACCACCCTGGCCAATGCC TCTCCCGAGTCGCTGGACAGGGTCAAGTTCGAGATCATCGGCCTGGGCGCCTTCCTGGGGGTGCTGATCTTCTACTTCAG CCAGGCCCTGGTGTACCGCAGCCTGAACATGAACTACCTGCAGCTGCGCTCGCTGCTCTACCTGGTTGGCCTGGGGCTGA TGGCCTATTCCCTGCTGTTCCGCAGGGGAGGGGTGCGTATCCAGGTGTCCCGCCAGGCGGCTTTCAAGTCCTTCGTGCTG GTGGCGGTCGGGCTGTACCTGATCATGATCGGCCTTTTGGGGGAGGGGATGCAGTACTTCGGCGTTTCCTTCCAGCGCAC GGTGACCGTCTCCTTCGCCTTTATCGCCGGCATCGTGCTGCTGCTGCTCCTTCTCTCCCAGCGCTTCCAGCGCGAGGTCA AGGTCGCGTTGCACAAGAACTTCTACCAGCACAAGCACGACTACCGCACCCAGTGGCTGCGCTTCACCGAGCAGCTCGCC ACCTCCCGTTCCTCCGACGAACTCTTGCAGCGCATCCTGTCCGCCTATTGCGACGTGTTCGGCATGGCAGGGGCGGCGCT GTTCCTCCTGGAGCAGAACCGCGGCGGGTACGGCATGACGGCGACCCACAACATGCAGCCCATGGGGGCACTGATCAAGC CGGATAATTCCCTGGTCAGGTTCATGGTCGAGCGCACCTGGGTGGTCAACGTCAGGGACGATACCCCCGAAGTCATGGAG GAGAACGGCGCCTTCTTCCGCGACAACCAGATATCCTTCGTCATCCCGCTCTTTGGCGCCGAGCGCATGGAGGGGTTCAT CGTCCTGGGGCGGGTGATCAAGGAAGACGAGGTGTACATCTACGAAGATTATGACCTGATGAAGACCATCGCCCGCCAGG CCTCCCAGGCGATCCTGCACCAGCGCCTCTCGGAGCAGCTCTCCCAGGCGCGGGAGGTGGAGGCCATCGGCAATATCGCC GCCTTCGTGGCCCACGACCTGAAGAACCTGGTCAGCAACCTGTCGCTGATCGTGGAGAATGCCGGCCGCTTCATCCAGAA TCCCGACTTCCAGCAGGACATGCTGGTCTCCCTGGGCAATACCGTCACCAAGATGCAGCACCTGATCGGCAGGCTCAGGA ACCTGGGGGAGCGGGACCATTTCACGGCCAAACCGGTGAATCTGCTGGAACTGGCCGAGAAGACCGCCCGTCTGGCCAGT GGCTCTGCCGTTACGGTGGAGGGGAGCGCCGAGACGGTGGTCGTGGATGAAAACGAGATGCAGAACGTGATCATGAACCT GCTGATGAACGCCATCGAGGCATCCGGGCCGGACAGGGGCGTGCGGATCCAGGTCGGCAACCTGGGCAATCCCTATCTGG CGGTGCACGATCAGGGGCATGGCATGTCGGCTGATTTCATGCGCAGGGAGCTGTTCAAGCCCTTCAAGACCACCAAGAAG AAGGGGCTGGGGATCGGACTGTACCAGTGCAAGCAGACAGTGGAGTCTTTTGGCGGTAGAATCGAAGTGGACAGTGAAGA GGGTGTGGGGACGACATTTACGATCTGGTTCAGCCAGGGGGGCGAAGGCGGTACCCCGGTCGGCCATTGCTGA
Upstream 100 bases:
>100_bases GACGCCTCTCTATCGTGGTACGTGGATAACCTCTGCCCCACGGTGGAGGGGAACTTGCCCGCTGCCGGGTCACGGGGCCT GGAGCCCGTGGGGAACTGAC
Downstream 100 bases:
>100_bases CGAGGGACAATGCACATGGTAAAGATACTGATAATCGATGACGATCCCGATATCCGCCAGCAGCTGAAGTGGGGCTTGAG CGACGAGTACAGCGTCGTGC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MLDSVITIAAIVALLFAAGYALHRERSRAGLFLCGALLLTALLELFDLLSLSLPQAAVPWKWFSLVAESLLPFFWIMCSL TYARQAAPWRFGPLLKGVIALSLLFCLLPFAVPLDSFFYAPDFPLERLLFLGNVGYFYYLGLMAALIFALVNFETTLANA SPESLDRVKFEIIGLGAFLGVLIFYFSQALVYRSLNMNYLQLRSLLYLVGLGLMAYSLLFRRGGVRIQVSRQAAFKSFVL VAVGLYLIMIGLLGEGMQYFGVSFQRTVTVSFAFIAGIVLLLLLLSQRFQREVKVALHKNFYQHKHDYRTQWLRFTEQLA TSRSSDELLQRILSAYCDVFGMAGAALFLLEQNRGGYGMTATHNMQPMGALIKPDNSLVRFMVERTWVVNVRDDTPEVME ENGAFFRDNQISFVIPLFGAERMEGFIVLGRVIKEDEVYIYEDYDLMKTIARQASQAILHQRLSEQLSQAREVEAIGNIA AFVAHDLKNLVSNLSLIVENAGRFIQNPDFQQDMLVSLGNTVTKMQHLIGRLRNLGERDHFTAKPVNLLELAEKTARLAS GSAVTVEGSAETVVVDENEMQNVIMNLLMNAIEASGPDRGVRIQVGNLGNPYLAVHDQGHGMSADFMRRELFKPFKTTKK KGLGIGLYQCKQTVESFGGRIEVDSEEGVGTTFTIWFSQGGEGGTPVGHC
Sequences:
>Translated_690_residues MLDSVITIAAIVALLFAAGYALHRERSRAGLFLCGALLLTALLELFDLLSLSLPQAAVPWKWFSLVAESLLPFFWIMCSL TYARQAAPWRFGPLLKGVIALSLLFCLLPFAVPLDSFFYAPDFPLERLLFLGNVGYFYYLGLMAALIFALVNFETTLANA SPESLDRVKFEIIGLGAFLGVLIFYFSQALVYRSLNMNYLQLRSLLYLVGLGLMAYSLLFRRGGVRIQVSRQAAFKSFVL VAVGLYLIMIGLLGEGMQYFGVSFQRTVTVSFAFIAGIVLLLLLLSQRFQREVKVALHKNFYQHKHDYRTQWLRFTEQLA TSRSSDELLQRILSAYCDVFGMAGAALFLLEQNRGGYGMTATHNMQPMGALIKPDNSLVRFMVERTWVVNVRDDTPEVME ENGAFFRDNQISFVIPLFGAERMEGFIVLGRVIKEDEVYIYEDYDLMKTIARQASQAILHQRLSEQLSQAREVEAIGNIA AFVAHDLKNLVSNLSLIVENAGRFIQNPDFQQDMLVSLGNTVTKMQHLIGRLRNLGERDHFTAKPVNLLELAEKTARLAS GSAVTVEGSAETVVVDENEMQNVIMNLLMNAIEASGPDRGVRIQVGNLGNPYLAVHDQGHGMSADFMRRELFKPFKTTKK KGLGIGLYQCKQTVESFGGRIEVDSEEGVGTTFTIWFSQGGEGGTPVGHC >Mature_690_residues MLDSVITIAAIVALLFAAGYALHRERSRAGLFLCGALLLTALLELFDLLSLSLPQAAVPWKWFSLVAESLLPFFWIMCSL TYARQAAPWRFGPLLKGVIALSLLFCLLPFAVPLDSFFYAPDFPLERLLFLGNVGYFYYLGLMAALIFALVNFETTLANA SPESLDRVKFEIIGLGAFLGVLIFYFSQALVYRSLNMNYLQLRSLLYLVGLGLMAYSLLFRRGGVRIQVSRQAAFKSFVL VAVGLYLIMIGLLGEGMQYFGVSFQRTVTVSFAFIAGIVLLLLLLSQRFQREVKVALHKNFYQHKHDYRTQWLRFTEQLA TSRSSDELLQRILSAYCDVFGMAGAALFLLEQNRGGYGMTATHNMQPMGALIKPDNSLVRFMVERTWVVNVRDDTPEVME ENGAFFRDNQISFVIPLFGAERMEGFIVLGRVIKEDEVYIYEDYDLMKTIARQASQAILHQRLSEQLSQAREVEAIGNIA AFVAHDLKNLVSNLSLIVENAGRFIQNPDFQQDMLVSLGNTVTKMQHLIGRLRNLGERDHFTAKPVNLLELAEKTARLAS GSAVTVEGSAETVVVDENEMQNVIMNLLMNAIEASGPDRGVRIQVGNLGNPYLAVHDQGHGMSADFMRRELFKPFKTTKK KGLGIGLYQCKQTVESFGGRIEVDSEEGVGTTFTIWFSQGGEGGTPVGHC
Specific function: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates dctD in response to environmental signals [H]
COG id: COG4191
COG function: function code T; Signal transduction histidine kinase regulating C4-dicarboxylate transport system
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=28.1938325991189, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1788549, Length=231, Percent_Identity=24.6753246753247, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR017055 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 77036; Mature: 77036
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDSVITIAAIVALLFAAGYALHRERSRAGLFLCGALLLTALLELFDLLSLSLPQAAVPW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH KWFSLVAESLLPFFWIMCSLTYARQAAPWRFGPLLKGVIALSLLFCLLPFAVPLDSFFYA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDFPLERLLFLGNVGYFYYLGLMAALIFALVNFETTLANASPESLDRVKFEIIGLGAFLG CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEHHHHHH VLIFYFSQALVYRSLNMNYLQLRSLLYLVGLGLMAYSLLFRRGGVRIQVSRQAAFKSFVL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH VAVGLYLIMIGLLGEGMQYFGVSFQRTVTVSFAFIAGIVLLLLLLSQRFQREVKVALHKN HHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYQHKHDYRTQWLRFTEQLATSRSSDELLQRILSAYCDVFGMAGAALFLLEQNRGGYGMT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCC ATHNMQPMGALIKPDNSLVRFMVERTWVVNVRDDTPEVMEENGAFFRDNQISFVIPLFGA EECCCCCCCCEECCCHHHHHHHHHHEEEEEECCCCHHHHHCCCCEEECCCEEEEEECCCC ERMEGFIVLGRVIKEDEVYIYEDYDLMKTIARQASQAILHQRLSEQLSQAREVEAIGNIA HHHCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFVAHDLKNLVSNLSLIVENAGRFIQNPDFQQDMLVSLGNTVTKMQHLIGRLRNLGERDH HHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FTAKPVNLLELAEKTARLASGSAVTVEGSAETVVVDENEMQNVIMNLLMNAIEASGPDRG CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC VRIQVGNLGNPYLAVHDQGHGMSADFMRRELFKPFKTTKKKGLGIGLYQCKQTVESFGGR EEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCE IEVDSEEGVGTTFTIWFSQGGEGGTPVGHC EEECCCCCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MLDSVITIAAIVALLFAAGYALHRERSRAGLFLCGALLLTALLELFDLLSLSLPQAAVPW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH KWFSLVAESLLPFFWIMCSLTYARQAAPWRFGPLLKGVIALSLLFCLLPFAVPLDSFFYA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDFPLERLLFLGNVGYFYYLGLMAALIFALVNFETTLANASPESLDRVKFEIIGLGAFLG CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEHHHHHH VLIFYFSQALVYRSLNMNYLQLRSLLYLVGLGLMAYSLLFRRGGVRIQVSRQAAFKSFVL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH VAVGLYLIMIGLLGEGMQYFGVSFQRTVTVSFAFIAGIVLLLLLLSQRFQREVKVALHKN HHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYQHKHDYRTQWLRFTEQLATSRSSDELLQRILSAYCDVFGMAGAALFLLEQNRGGYGMT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCC ATHNMQPMGALIKPDNSLVRFMVERTWVVNVRDDTPEVMEENGAFFRDNQISFVIPLFGA EECCCCCCCCEECCCHHHHHHHHHHEEEEEECCCCHHHHHCCCCEEECCCEEEEEECCCC ERMEGFIVLGRVIKEDEVYIYEDYDLMKTIARQASQAILHQRLSEQLSQAREVEAIGNIA HHHCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFVAHDLKNLVSNLSLIVENAGRFIQNPDFQQDMLVSLGNTVTKMQHLIGRLRNLGERDH HHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FTAKPVNLLELAEKTARLASGSAVTVEGSAETVVVDENEMQNVIMNLLMNAIEASGPDRG CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC VRIQVGNLGNPYLAVHDQGHGMSADFMRRELFKPFKTTKKKGLGIGLYQCKQTVESFGGR EEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCE IEVDSEEGVGTTFTIWFSQGGEGGTPVGHC EEECCCCCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2134335; 2793824; 11481431; 2551890; 2695394 [H]