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The map label for this gene is tapC [H]

Identifier: 118580834

GI number: 118580834

Start: 2619948

End: 2621156

Strand: Reverse

Name: tapC [H]

Synonym: Ppro_2421

Alternate gene names: 118580834

Gene position: 2621156-2619948 (Counterclockwise)

Preceding gene: 118580835

Following gene: 118580833

Centisome position: 65.4

GC content: 59.14

Gene sequence:

>1209_bases
ATGGCAATCTTTACCTGCAAACTCGGCTCACCAGACGGAAAGATTCTCTACCGGGAACTTGAAGCTTCCGATCCGGAGTT
GCTGTATAAAAGCCTTGAAGAACAAGGTTTTTTTGTTTTTAAGGTCAGCAGGAAGCCGTTCCAGTTTCTCTTTGACAAAC
GCATCGGCCGTCGTCAGCTCGATACCCGCTCCCTGCTCACCTTTAACCAGGAGATGTTGGTGCTGGTCAAGGCCGGCATG
CCGATCATGCAGGCGCTCAACACCATCCTCCAGCGCCAGGACGGCAGCCGGCTGACCGAGGTCCTGCGGCAGGTGCGGGA
TGACGTCAAGGGGGGGGCATCCCTCTCCACGGCCCTGGAACGGCATGGCCGCCTGTTTCCCCACCTGTACATCGCCTCGG
TTCGGGCCGGGGAGCGCACCGGCGACCTGATCAACACGACCAGGCGCTACATCCAGTACCTCAAGCGGGTTGAGGCTATC
CGCAAGAAGGTCGTCTCGGCCATGTTCTATCCCGCCATCATTGTTGTCGTTGCCTCACTGGCTGTTCTGCTGCTGCTGGT
GTACGTCGTGCCCACCTTCAGCCAGATCTACGCCGATGCCGGATCGCAGTTGCCGCTCCCCACCCAGATGCTCATCGCTT
TCACGACGTTTCTGAAACGTTTTTTCCTGGTGGGCCTGGTGCTGCTGTTTGCCGCCGCTGCCTGGTTCCGCTCCTGGGCC
GCTACGGACAACGGAAGGTTCCTGATCGACCGCTTCAAGATCAGGGTACCGCTGCTGGGGGAGATCTTCAGGAAATACTC
CGTCTCCGGGTTTACCCGTACCCTCTCCACCGTGCTGGGAAGCGGCATTCCGATCATCGAGTCGCTGCGCATGTCCATCG
GCACCCTGAACAATACCTACATGGAAAAGCGGCTCTTCGAGGCGGTTAAGTTCGTCGAGGAGGGGGGGACGCTCTCCGTC
GCCTTCGAGCGCATCGGTATCCTGCCGCCGCTGGCCCTGCGCATGCTGGGGGTCGGTGAAACCACCGGCGCCCTGGAAGA
TATGCTGTCGGACATCTCGGACTACCTTGAGGATGAACTGGAAGAGCGCATGCAGATCCTGACAACTGCCGTCGAACCGG
CGGTCATGGTTGTCATGGGGGTTGTCATCGGGGTCATCATCATCACCATGTACCTGCCGATCTTCAAGATCGCGGGAACG
GTGGGGTAA

Upstream 100 bases:

>100_bases
CCACGGCAAGTGGCGCGGGCCGCCGAAGCGCCACTGCAGGCCGTTTTGCTCAAGGTTTTTGTGTTTTAATTGTACCGACC
CTATGGTATATCTTTAGCAA

Downstream 100 bases:

>100_bases
CATAGTATATGACTCAATCCTATGGTCGCAGAAATATCGGCGCTATTCTCATGGAGCGCGGCTGTCTGACGGCGGAACAG
CTCCCCGTGGTGGTGGGGCA

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MAIFTCKLGSPDGKILYRELEASDPELLYKSLEEQGFFVFKVSRKPFQFLFDKRIGRRQLDTRSLLTFNQEMLVLVKAGM
PIMQALNTILQRQDGSRLTEVLRQVRDDVKGGASLSTALERHGRLFPHLYIASVRAGERTGDLINTTRRYIQYLKRVEAI
RKKVVSAMFYPAIIVVVASLAVLLLLVYVVPTFSQIYADAGSQLPLPTQMLIAFTTFLKRFFLVGLVLLFAAAAWFRSWA
ATDNGRFLIDRFKIRVPLLGEIFRKYSVSGFTRTLSTVLGSGIPIIESLRMSIGTLNNTYMEKRLFEAVKFVEEGGTLSV
AFERIGILPPLALRMLGVGETTGALEDMLSDISDYLEDELEERMQILTTAVEPAVMVVMGVVIGVIIITMYLPIFKIAGT
VG

Sequences:

>Translated_402_residues
MAIFTCKLGSPDGKILYRELEASDPELLYKSLEEQGFFVFKVSRKPFQFLFDKRIGRRQLDTRSLLTFNQEMLVLVKAGM
PIMQALNTILQRQDGSRLTEVLRQVRDDVKGGASLSTALERHGRLFPHLYIASVRAGERTGDLINTTRRYIQYLKRVEAI
RKKVVSAMFYPAIIVVVASLAVLLLLVYVVPTFSQIYADAGSQLPLPTQMLIAFTTFLKRFFLVGLVLLFAAAAWFRSWA
ATDNGRFLIDRFKIRVPLLGEIFRKYSVSGFTRTLSTVLGSGIPIIESLRMSIGTLNNTYMEKRLFEAVKFVEEGGTLSV
AFERIGILPPLALRMLGVGETTGALEDMLSDISDYLEDELEERMQILTTAVEPAVMVVMGVVIGVIIITMYLPIFKIAGT
VG
>Mature_401_residues
AIFTCKLGSPDGKILYRELEASDPELLYKSLEEQGFFVFKVSRKPFQFLFDKRIGRRQLDTRSLLTFNQEMLVLVKAGMP
IMQALNTILQRQDGSRLTEVLRQVRDDVKGGASLSTALERHGRLFPHLYIASVRAGERTGDLINTTRRYIQYLKRVEAIR
KKVVSAMFYPAIIVVVASLAVLLLLVYVVPTFSQIYADAGSQLPLPTQMLIAFTTFLKRFFLVGLVLLFAAAAWFRSWAA
TDNGRFLIDRFKIRVPLLGEIFRKYSVSGFTRTLSTVLGSGIPIIESLRMSIGTLNNTYMEKRLFEAVKFVEEGGTLSVA
FERIGILPPLALRMLGVGETTGALEDMLSDISDYLEDELEERMQILTTAVEPAVMVVMGVVIGVIIITMYLPIFKIAGTV
G

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=391, Percent_Identity=28.1329923273657, Blast_Score=184, Evalue=8e-48,
Organism=Escherichia coli, GI1786295, Length=335, Percent_Identity=26.2686567164179, Blast_Score=121, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 45062; Mature: 44931

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFTCKLGSPDGKILYRELEASDPELLYKSLEEQGFFVFKVSRKPFQFLFDKRIGRRQL
CEEEEEECCCCCCCEEEHHHCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHC
DTRSLLTFNQEMLVLVKAGMPIMQALNTILQRQDGSRLTEVLRQVRDDVKGGASLSTALE
CHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
RHGRLFPHLYIASVRAGERTGDLINTTRRYIQYLKRVEAIRKKVVSAMFYPAIIVVVASL
HCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLLLLVYVVPTFSQIYADAGSQLPLPTQMLIAFTTFLKRFFLVGLVLLFAAAAWFRSWA
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATDNGRFLIDRFKIRVPLLGEIFRKYSVSGFTRTLSTVLGSGIPIIESLRMSIGTLNNTY
CCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
MEKRLFEAVKFVEEGGTLSVAFERIGILPPLALRMLGVGETTGALEDMLSDISDYLEDEL
HHHHHHHHHHHHHCCCCEEEHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EERMQILTTAVEPAVMVVMGVVIGVIIITMYLPIFKIAGTVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIFTCKLGSPDGKILYRELEASDPELLYKSLEEQGFFVFKVSRKPFQFLFDKRIGRRQL
EEEEEECCCCCCCEEEHHHCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHC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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]