Click here to switch to the map view.

The map label for this gene is ycdQ [C]

Identifier: 118580835

GI number: 118580835

Start: 2621484

End: 2622218

Strand: Reverse

Name: ycdQ [C]

Synonym: Ppro_2422

Alternate gene names: 118580835

Gene position: 2622218-2621484 (Counterclockwise)

Preceding gene: 118580836

Following gene: 118580834

Centisome position: 65.42

GC content: 58.1

Gene sequence:

>735_bases
TTGAAAGCAATCGTCATTATTCCCACCTACAACGAACGGGAGAATATAGCCCGTCTGACCAGCAAGATCCTCGTGCAGCA
TCCGTCCTTACACGTTCTGATCGTTGACGACAATTCGCCCGACGGCACCGGAAAGATCGCCGACCAGCTGGCGGCCTCCG
AGAAGCGAATCCGGGTGATCCATCGCAGCGCCAAGCTCGGCCTGGGTTCGGCCTACCGGGTCGGCTTCAAGGCGGCCCTG
GAGATGGGTGCAGACTACCTGATCGAAATGGATGCGGATTTTTCCCACGACCCGGCGGTACTGCCGCTTTTTCTGGAAAC
CATCCAGGAGTGCGATCTGGTAATCGGCTCCCGCTACTTACACGGCGTCAGCGTGGTCAACTGGCCGATCCGCCGACTGA
TGCTGAGCTATTTCGCCAGCGTCTACACACGCTTCGTGACCGGCCTGGATATCAGGGACTGCACCAGCGGATTCAAATGC
TTCAGCAGGGCCGCCATGGAGGCCATCGACCTTGACCGGGTGCGCTCGGACGGCTACTCGTTTCAGATCGAAATGAACTA
CCGCTGCCGGGAGAAGGGGTTCAAGATCGTGGAGGTGCCGATCATCTTCATCGACCGTCACGCCGGCAGCTCCAAGATGT
CCAAAAAAATCGTGCGCGAGGCGGTGGTCATGGTCTGGAAACTTCGACTCGGTTCGCTCTTTTTCCGTTCTCTGAGGAAA
CGGCATGGGGCATGA

Upstream 100 bases:

>100_bases
GATGGCTGATCCAGCTCGGATGCGGGAAAAGTTTGTACTTTGCTCCGCTTTGGTTTATGTCTAGACACAGACCTTGACGT
GAATTGGAGAAAGAGACCGT

Downstream 100 bases:

>100_bases
TCTGTGGTCGCTTGTGCTTGTGACCGGCCTGTGGGGCTGGATCGTGGCGACGCTTTTTTTTATCTTCCGAGCCTTTCCCC
GCCGCGGGGTCTTCGAGCCG

Product: dolichyl-phosphate beta-D-mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKAIVIIPTYNERENIARLTSKILVQHPSLHVLIVDDNSPDGTGKIADQLAASEKRIRVIHRSAKLGLGSAYRVGFKAAL
EMGADYLIEMDADFSHDPAVLPLFLETIQECDLVIGSRYLHGVSVVNWPIRRLMLSYFASVYTRFVTGLDIRDCTSGFKC
FSRAAMEAIDLDRVRSDGYSFQIEMNYRCREKGFKIVEVPIIFIDRHAGSSKMSKKIVREAVVMVWKLRLGSLFFRSLRK
RHGA

Sequences:

>Translated_244_residues
MKAIVIIPTYNERENIARLTSKILVQHPSLHVLIVDDNSPDGTGKIADQLAASEKRIRVIHRSAKLGLGSAYRVGFKAAL
EMGADYLIEMDADFSHDPAVLPLFLETIQECDLVIGSRYLHGVSVVNWPIRRLMLSYFASVYTRFVTGLDIRDCTSGFKC
FSRAAMEAIDLDRVRSDGYSFQIEMNYRCREKGFKIVEVPIIFIDRHAGSSKMSKKIVREAVVMVWKLRLGSLFFRSLRK
RHGA
>Mature_244_residues
MKAIVIIPTYNERENIARLTSKILVQHPSLHVLIVDDNSPDGTGKIADQLAASEKRIRVIHRSAKLGLGSAYRVGFKAAL
EMGADYLIEMDADFSHDPAVLPLFLETIQECDLVIGSRYLHGVSVVNWPIRRLMLSYFASVYTRFVTGLDIRDCTSGFKC
FSRAAMEAIDLDRVRSDGYSFQIEMNYRCREKGFKIVEVPIIFIDRHAGSSKMSKKIVREAVVMVWKLRLGSLFFRSLRK
RHGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=222, Percent_Identity=38.2882882882883, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71999402, Length=232, Percent_Identity=37.0689655172414, Blast_Score=137, Evalue=5e-33,
Organism=Saccharomyces cerevisiae, GI6325441, Length=223, Percent_Identity=32.2869955156951, Blast_Score=108, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24585265, Length=221, Percent_Identity=34.841628959276, Blast_Score=129, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27658; Mature: 27658

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIVIIPTYNERENIARLTSKILVQHPSLHVLIVDDNSPDGTGKIADQLAASEKRIRVI
CCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
HRSAKLGLGSAYRVGFKAALEMGADYLIEMDADFSHDPAVLPLFLETIQECDLVIGSRYL
HHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HGVSVVNWPIRRLMLSYFASVYTRFVTGLDIRDCTSGFKCFSRAAMEAIDLDRVRSDGYS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
FQIEMNYRCREKGFKIVEVPIIFIDRHAGSSKMSKKIVREAVVMVWKLRLGSLFFRSLRK
EEEEECCCHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGA
HCCC
>Mature Secondary Structure
MKAIVIIPTYNERENIARLTSKILVQHPSLHVLIVDDNSPDGTGKIADQLAASEKRIRVI
CCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
HRSAKLGLGSAYRVGFKAALEMGADYLIEMDADFSHDPAVLPLFLETIQECDLVIGSRYL
HHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HGVSVVNWPIRRLMLSYFASVYTRFVTGLDIRDCTSGFKCFSRAAMEAIDLDRVRSDGYS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
FQIEMNYRCREKGFKIVEVPIIFIDRHAGSSKMSKKIVREAVVMVWKLRLGSLFFRSLRK
EEEEECCCHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]