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The map label for this gene is ycbZ [H]

Identifier: 118580762

GI number: 118580762

Start: 2536384

End: 2538801

Strand: Direct

Name: ycbZ [H]

Synonym: Ppro_2347

Alternate gene names: 118580762

Gene position: 2536384-2538801 (Clockwise)

Preceding gene: 118580760

Following gene: 118580772

Centisome position: 63.28

GC content: 64.02

Gene sequence:

>2418_bases
ATGGCACAGGACGAACACAGAGTAGCGGCGGAGAAACTCTGCTGGCGGTGCGATCCCAATCTGCTGGAATTCCGCACCAC
GCAGGAGCTGGGAGAGCTGGAGGAGGCCATCGGCCAGGAGCGGGCGTTCCGCTCCATAGAATTCGGCCTGGGCATGTCGG
AGAGCGGCTTCAACCTCTATCTGGCCGGTGAGTCGGGAACCGGGCGGGCCTCGTCGATCATGGCGCTGCTCAAGAAGCGG
GCGGCCGGCGAGACGACTCCCCACGACTGGTGCTACGTCAACAACTTCAAGAACCCGGACTGCCCCATCGCCCTCTCCCT
GGAGGCGGGCATGGGGCGGGAACTGGAACGGGATCTGAGCGAGCTCTTGGCGGTGGTCAAGCACGACATCCCCAAGGCGC
TGCAGAGCAAGGAATACGCCCTGGAGAAGACCGCCATCATTGTGGCCAACCAGGAGAAGAACAACCAGCTGTTCGCCGCG
CTTGACAGGGAGGCCCAGGGGAAGGAGTACGTGCTGCAGCGCACCACCTCGGGCCTGATGATGCTGCCCCAGCTGGAGGG
GCGCAACATGACCAACGAGGAGTACGACAACCTAGATTTGGAGGCCAGGGCACGGGTGGACGCAGCCGGCAACGAGCTGA
AGGGGCGGCTGGCAGATGTGCTCAGCCAGGTTATGGAGAACGACAAGGGGGTCAGGGAGGCGTTGGCACGGCTGGACCGG
GAGCTGGGGCTGTCCGCCGTCGCCCACCACGTCGCTCCGCTCCGGGAGAAGTACGCCGCCCATCCCCGGGTGGTCTCCCA
CCTGGAGGCGGTGCAGGAGGACATCCTGCTCAACCTGGAGGAATTCAAGAATACGGAACAGGAGTCCCTGCCCACCGGAG
GAGCGGCGGGACAGGCAAACGCCTTCGAACGCTACGGCGTCAACGTGCTGGTGGACAACAGCGAGAACGGGGGGGCGCCG
GTGGTGTACGAGGCCAACCCCACCTACCACAACCTGTTCGGCCGCATCGACCATGTCATGCAGGTGGGAGGCGTGGCCAG
CACCAATTTCACCAGGATCAAGGCGGGAGCCCTGCACCGGGCCAATGGAGGTTACCTGGTGTTCAACGCCCTGGACGTGC
TGACCAGCCCCTTTGCCTGGGATGCGCTCAAGCGCTGCATCCGCAATGGCGAAATCAGGATCGAGGATGTGATGGAGCAG
TACCGTTTCCTCTCCATCGTATCCCTCAAGCCGGAGCCGGTGCCGCTCAAGGCCAAGATCATCATGATCGGCTCCCCCCT
GATCTACCACCTGCTCTTCCACCTGGAACCGGACTATCGCAAATTCTTCAAGGTCAAGGCCGATTTCGACAGCCACGTGA
CCCGCACCCCCGCCGTGCTGCGCGAGTATGCCCTGTTCGTGGCCAACCATTGCCGGGAGGAGAAGCTGCTCCCCTTCACC
AGTGACGGCGTCGCCTGCCTGCTGGAATACGCGGCCCGCTGCGTCGAGGACCAGCAGCGGCTCTCCTGCCGGTTCATGGA
GATCAGCGACCTGTTGCGGGAGGCGGACTACTGGGCGCGCCGGGAGAACAGGAGCCGGATCGACCGGGAAATCGTCAGGC
GGACCATCGATGAAAAGATCTATCGCGGCAACCGCCTGGAGGAGCGCATCCAGGAGCTGATCACCGAGGGGACCCTGCTG
GTGGACAGCGAGGGAAGCGAGCTGGGCCAGGTCAACGGGCTCTCCGTGATCCAGCTGGGGGACTACAGCTTCGGCAGGCC
CTCGCGGGTCACCGCCCGGGTCTACATGGGAAGCGGCAGGATGGTCAACATCGAGCGGGAGGTCAAGCTCTCCGGCCCGA
TCCACGACAAGGGGCTTTTGATCCTCACCGGCTACCTGGGGGGGAAATACGCCCAGGAGAGGCCGCTCTCCTTCTCGGCC
TCCATCTGCTTCGAGCAGTCCTACGAGGGGGTGGAGGGGGACAGCGCCTCGTCCACCGAGCTGTACGCGCTGCTGTCGGC
CCTGTCCGGCGTGCCGCTGAAACAGGGGATCGCCGTGACCGGCAGCGTCAACCAGCTGGGCAAGGTGCAGCCCATCGGCG
GGGTCAACCAGAAGATCGAGGGGTTCTTCGCCATCTGCAGGCTGCGGGGGCTGACCGGAGAGCAGGGGGTGATCATCCCC
GCGATCAACGAGCGCAACCTGATGCTGAACGACGAGGTGATCCAGGCGGTTCGGGAGGAAAAATTCCACATCTGGAGCGT
GGAGAGCATCGACCAGGGAATCAAGATCCTGACCGGCCTCCCCGCCGGTGAGCGGCAGCCGGATGGAAGCTACCCCCAGG
GGAGCATCAACTGGCTGGTGGACCGGCGCTTGAGCGACCTGGCGGAGAAGATGAAGGGCTTTTCACCGGAAAGAGAGAAG
GAAAAACAGAGTCCGTAG

Upstream 100 bases:

>100_bases
TGGGGAGGGAGCGGAGCGGTAACGGTAACGGGCAGGCTTCCCGCTTCATGGTACTATTTCATCAAGAGCACAATGGACGG
TTGGGGAAAGGGGGATGGCA

Downstream 100 bases:

>100_bases
GACAAGCTCCCCCGTGCCAGCCGGTAAGCGGCCATACAAGCGGGAGCAGAGGGTTCATGTTCTCGGCTTGGCCCTGCGGG
TGGGGGGGGCGCTCCAGGGG

Product: peptidase S16, lon domain-containing protein

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 805; Mature: 804

Protein sequence:

>805_residues
MAQDEHRVAAEKLCWRCDPNLLEFRTTQELGELEEAIGQERAFRSIEFGLGMSESGFNLYLAGESGTGRASSIMALLKKR
AAGETTPHDWCYVNNFKNPDCPIALSLEAGMGRELERDLSELLAVVKHDIPKALQSKEYALEKTAIIVANQEKNNQLFAA
LDREAQGKEYVLQRTTSGLMMLPQLEGRNMTNEEYDNLDLEARARVDAAGNELKGRLADVLSQVMENDKGVREALARLDR
ELGLSAVAHHVAPLREKYAAHPRVVSHLEAVQEDILLNLEEFKNTEQESLPTGGAAGQANAFERYGVNVLVDNSENGGAP
VVYEANPTYHNLFGRIDHVMQVGGVASTNFTRIKAGALHRANGGYLVFNALDVLTSPFAWDALKRCIRNGEIRIEDVMEQ
YRFLSIVSLKPEPVPLKAKIIMIGSPLIYHLLFHLEPDYRKFFKVKADFDSHVTRTPAVLREYALFVANHCREEKLLPFT
SDGVACLLEYAARCVEDQQRLSCRFMEISDLLREADYWARRENRSRIDREIVRRTIDEKIYRGNRLEERIQELITEGTLL
VDSEGSELGQVNGLSVIQLGDYSFGRPSRVTARVYMGSGRMVNIEREVKLSGPIHDKGLLILTGYLGGKYAQERPLSFSA
SICFEQSYEGVEGDSASSTELYALLSALSGVPLKQGIAVTGSVNQLGKVQPIGGVNQKIEGFFAICRLRGLTGEQGVIIP
AINERNLMLNDEVIQAVREEKFHIWSVESIDQGIKILTGLPAGERQPDGSYPQGSINWLVDRRLSDLAEKMKGFSPEREK
EKQSP

Sequences:

>Translated_805_residues
MAQDEHRVAAEKLCWRCDPNLLEFRTTQELGELEEAIGQERAFRSIEFGLGMSESGFNLYLAGESGTGRASSIMALLKKR
AAGETTPHDWCYVNNFKNPDCPIALSLEAGMGRELERDLSELLAVVKHDIPKALQSKEYALEKTAIIVANQEKNNQLFAA
LDREAQGKEYVLQRTTSGLMMLPQLEGRNMTNEEYDNLDLEARARVDAAGNELKGRLADVLSQVMENDKGVREALARLDR
ELGLSAVAHHVAPLREKYAAHPRVVSHLEAVQEDILLNLEEFKNTEQESLPTGGAAGQANAFERYGVNVLVDNSENGGAP
VVYEANPTYHNLFGRIDHVMQVGGVASTNFTRIKAGALHRANGGYLVFNALDVLTSPFAWDALKRCIRNGEIRIEDVMEQ
YRFLSIVSLKPEPVPLKAKIIMIGSPLIYHLLFHLEPDYRKFFKVKADFDSHVTRTPAVLREYALFVANHCREEKLLPFT
SDGVACLLEYAARCVEDQQRLSCRFMEISDLLREADYWARRENRSRIDREIVRRTIDEKIYRGNRLEERIQELITEGTLL
VDSEGSELGQVNGLSVIQLGDYSFGRPSRVTARVYMGSGRMVNIEREVKLSGPIHDKGLLILTGYLGGKYAQERPLSFSA
SICFEQSYEGVEGDSASSTELYALLSALSGVPLKQGIAVTGSVNQLGKVQPIGGVNQKIEGFFAICRLRGLTGEQGVIIP
AINERNLMLNDEVIQAVREEKFHIWSVESIDQGIKILTGLPAGERQPDGSYPQGSINWLVDRRLSDLAEKMKGFSPEREK
EKQSP
>Mature_804_residues
AQDEHRVAAEKLCWRCDPNLLEFRTTQELGELEEAIGQERAFRSIEFGLGMSESGFNLYLAGESGTGRASSIMALLKKRA
AGETTPHDWCYVNNFKNPDCPIALSLEAGMGRELERDLSELLAVVKHDIPKALQSKEYALEKTAIIVANQEKNNQLFAAL
DREAQGKEYVLQRTTSGLMMLPQLEGRNMTNEEYDNLDLEARARVDAAGNELKGRLADVLSQVMENDKGVREALARLDRE
LGLSAVAHHVAPLREKYAAHPRVVSHLEAVQEDILLNLEEFKNTEQESLPTGGAAGQANAFERYGVNVLVDNSENGGAPV
VYEANPTYHNLFGRIDHVMQVGGVASTNFTRIKAGALHRANGGYLVFNALDVLTSPFAWDALKRCIRNGEIRIEDVMEQY
RFLSIVSLKPEPVPLKAKIIMIGSPLIYHLLFHLEPDYRKFFKVKADFDSHVTRTPAVLREYALFVANHCREEKLLPFTS
DGVACLLEYAARCVEDQQRLSCRFMEISDLLREADYWARRENRSRIDREIVRRTIDEKIYRGNRLEERIQELITEGTLLV
DSEGSELGQVNGLSVIQLGDYSFGRPSRVTARVYMGSGRMVNIEREVKLSGPIHDKGLLILTGYLGGKYAQERPLSFSAS
ICFEQSYEGVEGDSASSTELYALLSALSGVPLKQGIAVTGSVNQLGKVQPIGGVNQKIEGFFAICRLRGLTGEQGVIIPA
INERNLMLNDEVIQAVREEKFHIWSVESIDQGIKILTGLPAGERQPDGSYPQGSINWLVDRRLSDLAEKMKGFSPEREKE
KQSP

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=416, Percent_Identity=35.5769230769231, Blast_Score=256, Evalue=4e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 89862; Mature: 89731

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQDEHRVAAEKLCWRCDPNLLEFRTTQELGELEEAIGQERAFRSIEFGLGMSESGFNLY
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
LAGESGTGRASSIMALLKKRAAGETTPHDWCYVNNFKNPDCPIALSLEAGMGRELERDLS
EECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHH
ELLAVVKHDIPKALQSKEYALEKTAIIVANQEKNNQLFAALDREAQGKEYVLQRTTSGLM
HHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHCCCCEE
MLPQLEGRNMTNEEYDNLDLEARARVDAAGNELKGRLADVLSQVMENDKGVREALARLDR
EEECCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ELGLSAVAHHVAPLREKYAAHPRVVSHLEAVQEDILLNLEEFKNTEQESLPTGGAAGQAN
HHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCCCCCCCCCC
AFERYGVNVLVDNSENGGAPVVYEANPTYHNLFGRIDHVMQVGGVASTNFTRIKAGALHR
CHHHCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEE
ANGGYLVFNALDVLTSPFAWDALKRCIRNGEIRIEDVMEQYRFLSIVSLKPEPVPLKAKI
CCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHEEEECCCCCCCCEEEE
IMIGSPLIYHLLFHLEPDYRKFFKVKADFDSHVTRTPAVLREYALFVANHCREEKLLPFT
EEECCHHHHHHHHHCCCCHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
SDGVACLLEYAARCVEDQQRLSCRFMEISDLLREADYWARRENRSRIDREIVRRTIDEKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRGNRLEERIQELITEGTLLVDSEGSELGQVNGLSVIQLGDYSFGRPSRVTARVYMGSGR
HCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCC
MVNIEREVKLSGPIHDKGLLILTGYLGGKYAQERPLSFSASICFEQSYEGVEGDSASSTE
EEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHH
LYALLSALSGVPLKQGIAVTGSVNQLGKVQPIGGVNQKIEGFFAICRLRGLTGEQGVIIP
HHHHHHHHCCCCHHCCEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE
AINERNLMLNDEVIQAVREEKFHIWSVESIDQGIKILTGLPAGERQPDGSYPQGSINWLV
ECCCCCEEECHHHHHHHHHCCCEEEEHHHHHCCHHEEECCCCCCCCCCCCCCCCCHHHHH
DRRLSDLAEKMKGFSPEREKEKQSP
HHHHHHHHHHHHCCCCCHHHHCCCC
>Mature Secondary Structure 
AQDEHRVAAEKLCWRCDPNLLEFRTTQELGELEEAIGQERAFRSIEFGLGMSESGFNLY
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
LAGESGTGRASSIMALLKKRAAGETTPHDWCYVNNFKNPDCPIALSLEAGMGRELERDLS
EECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHH
ELLAVVKHDIPKALQSKEYALEKTAIIVANQEKNNQLFAALDREAQGKEYVLQRTTSGLM
HHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHCCCCEE
MLPQLEGRNMTNEEYDNLDLEARARVDAAGNELKGRLADVLSQVMENDKGVREALARLDR
EEECCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ELGLSAVAHHVAPLREKYAAHPRVVSHLEAVQEDILLNLEEFKNTEQESLPTGGAAGQAN
HHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCCCCCCCCCC
AFERYGVNVLVDNSENGGAPVVYEANPTYHNLFGRIDHVMQVGGVASTNFTRIKAGALHR
CHHHCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEE
ANGGYLVFNALDVLTSPFAWDALKRCIRNGEIRIEDVMEQYRFLSIVSLKPEPVPLKAKI
CCCCEEEEEEHHHHCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHEEEECCCCCCCCEEEE
IMIGSPLIYHLLFHLEPDYRKFFKVKADFDSHVTRTPAVLREYALFVANHCREEKLLPFT
EEECCHHHHHHHHHCCCCHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
SDGVACLLEYAARCVEDQQRLSCRFMEISDLLREADYWARRENRSRIDREIVRRTIDEKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRGNRLEERIQELITEGTLLVDSEGSELGQVNGLSVIQLGDYSFGRPSRVTARVYMGSGR
HCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCC
MVNIEREVKLSGPIHDKGLLILTGYLGGKYAQERPLSFSASICFEQSYEGVEGDSASSTE
EEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHH
LYALLSALSGVPLKQGIAVTGSVNQLGKVQPIGGVNQKIEGFFAICRLRGLTGEQGVIIP
HHHHHHHHCCCCHHCCEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE
AINERNLMLNDEVIQAVREEKFHIWSVESIDQGIKILTGLPAGERQPDGSYPQGSINWLV
ECCCCCEEECHHHHHHHHHCCCEEEEHHHHHCCHHEEECCCCCCCCCCCCCCCCCHHHHH
DRRLSDLAEKMKGFSPEREKEKQSP
HHHHHHHHHHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]