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The map label for this gene is infC [H]

Identifier: 118580722

GI number: 118580722

Start: 2488792

End: 2489256

Strand: Reverse

Name: infC [H]

Synonym: Ppro_2307

Alternate gene names: 118580722

Gene position: 2489256-2488792 (Counterclockwise)

Preceding gene: 118580723

Following gene: 118580721

Centisome position: 62.11

GC content: 54.62

Gene sequence:

>465_bases
GTGATCGGCCCCGATAACGAACAGCTCGGTGTGATTTCCCTGTCAAAGGCACGTGAACTTGCCGAGCAGCAGCAACTGGA
CCTTGTTGAGGTGTCACCCACCGCGACTCCTCCGGTCTGCCGCATCATGGACTACGGCAAGTTCAAGTACCAGCAGAGCA
AGAAGCAGCAGGAATCCCGAAAAAAGCAGGCCCATGTGGAGGTCAAGGAGATTAAGTTGCGTCCCAAGACCGATGACCAC
GACCTCATGTTCAAGGTCAAGCATGTGCGGCGTTTTCTGGAAGAGGGGAACAAAGCCAAGGTGACCCTGGTGTTTCGTGG
CAGGGAGATCACCCACATGGACATCGGTCGAGCCGTGATTCAGCGCTTTGCCGCCGAACTGGAAGATATCGCCATTATCG
AAACCCAGCCACGGGTCGATGGCCGCAATATGTACATGATCGTGGCCCCCAAGATCAAAAAATAA

Upstream 100 bases:

>100_bases
CGCCCGTTTCGCGGCGTCGGAACTGTTCCACCCAGGAGGTGCAGTCATAGCAAAACCGACCGTAAACATCAATAATGCCA
TCCGAGCAGCGGAAGTCAGG

Downstream 100 bases:

>100_bases
CTCGATCGAGAGTTTGATTATTTAGTAGCAATTTAGAGAGGGAGAGCGAACATGCCGAAAATCAAGACGAACCGCGGCGC
TGCCAAGCGCTTCAGAAAAT

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIGPDNEQLGVISLSKARELAEQQQLDLVEVSPTATPPVCRIMDYGKFKYQQSKKQQESRKKQAHVEVKEIKLRPKTDDH
DLMFKVKHVRRFLEEGNKAKVTLVFRGREITHMDIGRAVIQRFAAELEDIAIIETQPRVDGRNMYMIVAPKIKK

Sequences:

>Translated_154_residues
MIGPDNEQLGVISLSKARELAEQQQLDLVEVSPTATPPVCRIMDYGKFKYQQSKKQQESRKKQAHVEVKEIKLRPKTDDH
DLMFKVKHVRRFLEEGNKAKVTLVFRGREITHMDIGRAVIQRFAAELEDIAIIETQPRVDGRNMYMIVAPKIKK
>Mature_154_residues
MIGPDNEQLGVISLSKARELAEQQQLDLVEVSPTATPPVCRIMDYGKFKYQQSKKQQESRKKQAHVEVKEIKLRPKTDDH
DLMFKVKHVRRFLEEGNKAKVTLVFRGREITHMDIGRAVIQRFAAELEDIAIIETQPRVDGRNMYMIVAPKIKK

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=155, Percent_Identity=52.258064516129, Blast_Score=155, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 17812; Mature: 17812

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGPDNEQLGVISLSKARELAEQQQLDLVEVSPTATPPVCRIMDYGKFKYQQSKKQQESR
CCCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHH
KKQAHVEVKEIKLRPKTDDHDLMFKVKHVRRFLEEGNKAKVTLVFRGREITHMDIGRAVI
HHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEHHHHHHHH
QRFAAELEDIAIIETQPRVDGRNMYMIVAPKIKK
HHHHHHHHCEEEEECCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MIGPDNEQLGVISLSKARELAEQQQLDLVEVSPTATPPVCRIMDYGKFKYQQSKKQQESR
CCCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHH
KKQAHVEVKEIKLRPKTDDHDLMFKVKHVRRFLEEGNKAKVTLVFRGREITHMDIGRAVI
HHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEHHHHHHHH
QRFAAELEDIAIIETQPRVDGRNMYMIVAPKIKK
HHHHHHHHCEEEEECCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA