| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is nadE [H]
Identifier: 118580580
GI number: 118580580
Start: 2333043
End: 2335112
Strand: Reverse
Name: nadE [H]
Synonym: Ppro_2164
Alternate gene names: 118580580
Gene position: 2335112-2333043 (Counterclockwise)
Preceding gene: 118580581
Following gene: 118580577
Centisome position: 58.26
GC content: 64.06
Gene sequence:
>2070_bases GTGGATACGACATTCTTCAATCTCTACAACCATAATTTCATCCGTGCGGCAGTGGCGGTCCCCGAGGTCAAGGTGGCAGA CCCGGCACACAACGCAGGTCAGACCATCGCCATGATGCGCCAGGCGTGGGAGCAGAGCGCGCTGATCGCGATCTTTCCCG AACTGGGGCTCTCGGCCTACTCCTGCGACGACCTGTTTCACCAGCAGACCCTGCTGGACGGCTCCATGGATGCACTGGAC GCGGTGCTGAAGGCCTCCATGGACATTCCGGTGATCACGGTGGTGGGACTGCCGCTGCAGGTCCACAGCATGCTGTTCAA CTGCGCCGTGGTGCTCTACCGGGGCAGGATCCTGGGGGTGGCGCCCAAGAGTTTCCTCCCCGGCTACCGCGAGTTCTACG AGCTGCGCCAGTTCGTCCCGGCCGCCTACGCTCCGGTGGAGAAGATCGACCTGCTGGGGCAGCAGGGGATCCCCTTCGGC AACCGCCTGCTGTTCCAGGTGGAGGAACAGCCGCTGCTGACCTTCTACACCGAAATCTGCGAGGATGTGTGGGTGCCCAT TCCCCCTTCCTCCTTTGCGGCCCTGGCCGGGGCCAGCGTCCTGATCAACCTCTCCGCCTCCAACATCACCGTGGGCAAGG CCGATTACCGGCGCAGCCTGGTGGCCAACCAGTCCGGCCGCTGTCTGTCCGCCTATCTCTACAGCGCCGCAGGAATCGGG GAATCCACCACCGACCTGGCCTGGGACGGACACGGCATGATCTTCGAGAATGGCGCCTGCCTAGGGGAAACCAAGCGTTT CTCCTATGAATCCCAGATGATCTTCGCTGATATCGACCTTGACAGGCTGGCCCAGGAACGCATGCGCCAGACCAGCTACG GCCAGTCGGTGCTCCGGCACAGGGATGAAGTGGCCGGTTTCCGCACGGTACGCTTTTCAGCCTCCCTGCCCAGGGAACGG GTGCTCCCCCTGGAGCGATTCTACGAACGCTTCCCCTTCGTACCCAGCGACCCGTCGCGGCGGGACGAGCGCTGCAAGGA GGTGTACGAGATCCAGGTGCAGGGGCTGGTGAAGCGCTTCAAGGCAACCGGAGCGGACAAGATGGTGATCGGCGTCTCCG GCGGCCTGGACTCCACCCAGGCGCTCCTGGTCTGCGCCCGGGCCATGGATGTCATGGGGCTCTCCCGGATGCATATCCTG GCCTACACCATGCCCGGATTCGCCACCAGCCAGCGTACCCTGGAACAGGCCAGGGAACTGATCCGGACGGTTGGCTGCAC CTACCACGAGATCGATATCCGTCCCAGTTGCCTGCAGATGCTCCAGGACATCGGCCACCCCTTCTTCCACGGCAAGCCGG TCTACGACATCACCTTCGAGAACGTGCAGGCCGGCGAGAGGACCAGCCACCTCTTCCGGTTGGCCAACCAGACCGGCGGC CTGGTGGTGGGGACCAGCGATCTGAGCGAGCTGGGGCTTGGGTGGTGCACCTACGGCGTAGGAGATCACATGGCCCACTA CCATGTCAATGCCAGCGTTCCCAAGACCCTGATCCAGTACCTGATTCGCTGGGCCGCCCTCACCCACCAGTTGGGTCCGG AGGTGAGCACGGTGCTCATGGACGTGCTGGAGACCGAGATCAGCCCCGAGCTGGTTCCGGGCAAGGAGGACGAAGATCAG CCGGTGCAGCGCACCGAGGATGTGGTCGGCCCCTATGAGCTGCAGGACTTCAACCTCTACTACATCCTGCGCCTGGGCTA CCTGCCGCCCAAGGTCGCCTTCCTGGCCTGGAACGCCTGGCACGACCGGACGCGCCACCATTGGCCGGATATCCCCGAAC ACAAGCGCAACCAGTACTCCATGCACGACATCAAGCGCTGGCTGACGGTCTTTCTGCGTCGCTTCTTCAAGACCAGCCAG TACAAGCGCAGCTGCATGGCCAATGCTCCCAAGGTCGGCTCGGGCGGATCCCTGTCACCCCGCGGCGACTGGCGCGCCCC CAGCGACGGCGAGGCCAGCGCCTGGCTCGCCCAGTTGGAGCGCATCCCCGACCAGGCCCATGACGAATGA
Upstream 100 bases:
>100_bases TGCCTGGATTTCGCCCTCCGCTCAACAATCGTTTTTCAAGCCGGGTGAAACGTGCTAGAGTGGCGCCCATGCAGGCCTTG AGAACAGGGAGGGAAACCAG
Downstream 100 bases:
>100_bases TGATCCGCAAAAAAAATCCTCCTTTCCCCAGGGGGATTTTTTTTGCGTGAGTGTCCGCTTCTGGCCATGGCCTGAGAGGC CCGAATCCGGGAGCGGCATC
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 689; Mature: 689
Protein sequence:
>689_residues MDTTFFNLYNHNFIRAAVAVPEVKVADPAHNAGQTIAMMRQAWEQSALIAIFPELGLSAYSCDDLFHQQTLLDGSMDALD AVLKASMDIPVITVVGLPLQVHSMLFNCAVVLYRGRILGVAPKSFLPGYREFYELRQFVPAAYAPVEKIDLLGQQGIPFG NRLLFQVEEQPLLTFYTEICEDVWVPIPPSSFAALAGASVLINLSASNITVGKADYRRSLVANQSGRCLSAYLYSAAGIG ESTTDLAWDGHGMIFENGACLGETKRFSYESQMIFADIDLDRLAQERMRQTSYGQSVLRHRDEVAGFRTVRFSASLPRER VLPLERFYERFPFVPSDPSRRDERCKEVYEIQVQGLVKRFKATGADKMVIGVSGGLDSTQALLVCARAMDVMGLSRMHIL AYTMPGFATSQRTLEQARELIRTVGCTYHEIDIRPSCLQMLQDIGHPFFHGKPVYDITFENVQAGERTSHLFRLANQTGG LVVGTSDLSELGLGWCTYGVGDHMAHYHVNASVPKTLIQYLIRWAALTHQLGPEVSTVLMDVLETEISPELVPGKEDEDQ PVQRTEDVVGPYELQDFNLYYILRLGYLPPKVAFLAWNAWHDRTRHHWPDIPEHKRNQYSMHDIKRWLTVFLRRFFKTSQ YKRSCMANAPKVGSGGSLSPRGDWRAPSDGEASAWLAQLERIPDQAHDE
Sequences:
>Translated_689_residues MDTTFFNLYNHNFIRAAVAVPEVKVADPAHNAGQTIAMMRQAWEQSALIAIFPELGLSAYSCDDLFHQQTLLDGSMDALD AVLKASMDIPVITVVGLPLQVHSMLFNCAVVLYRGRILGVAPKSFLPGYREFYELRQFVPAAYAPVEKIDLLGQQGIPFG NRLLFQVEEQPLLTFYTEICEDVWVPIPPSSFAALAGASVLINLSASNITVGKADYRRSLVANQSGRCLSAYLYSAAGIG ESTTDLAWDGHGMIFENGACLGETKRFSYESQMIFADIDLDRLAQERMRQTSYGQSVLRHRDEVAGFRTVRFSASLPRER VLPLERFYERFPFVPSDPSRRDERCKEVYEIQVQGLVKRFKATGADKMVIGVSGGLDSTQALLVCARAMDVMGLSRMHIL AYTMPGFATSQRTLEQARELIRTVGCTYHEIDIRPSCLQMLQDIGHPFFHGKPVYDITFENVQAGERTSHLFRLANQTGG LVVGTSDLSELGLGWCTYGVGDHMAHYHVNASVPKTLIQYLIRWAALTHQLGPEVSTVLMDVLETEISPELVPGKEDEDQ PVQRTEDVVGPYELQDFNLYYILRLGYLPPKVAFLAWNAWHDRTRHHWPDIPEHKRNQYSMHDIKRWLTVFLRRFFKTSQ YKRSCMANAPKVGSGGSLSPRGDWRAPSDGEASAWLAQLERIPDQAHDE >Mature_689_residues MDTTFFNLYNHNFIRAAVAVPEVKVADPAHNAGQTIAMMRQAWEQSALIAIFPELGLSAYSCDDLFHQQTLLDGSMDALD AVLKASMDIPVITVVGLPLQVHSMLFNCAVVLYRGRILGVAPKSFLPGYREFYELRQFVPAAYAPVEKIDLLGQQGIPFG NRLLFQVEEQPLLTFYTEICEDVWVPIPPSSFAALAGASVLINLSASNITVGKADYRRSLVANQSGRCLSAYLYSAAGIG ESTTDLAWDGHGMIFENGACLGETKRFSYESQMIFADIDLDRLAQERMRQTSYGQSVLRHRDEVAGFRTVRFSASLPRER VLPLERFYERFPFVPSDPSRRDERCKEVYEIQVQGLVKRFKATGADKMVIGVSGGLDSTQALLVCARAMDVMGLSRMHIL AYTMPGFATSQRTLEQARELIRTVGCTYHEIDIRPSCLQMLQDIGHPFFHGKPVYDITFENVQAGERTSHLFRLANQTGG LVVGTSDLSELGLGWCTYGVGDHMAHYHVNASVPKTLIQYLIRWAALTHQLGPEVSTVLMDVLETEISPELVPGKEDEDQ PVQRTEDVVGPYELQDFNLYYILRLGYLPPKVAFLAWNAWHDRTRHHWPDIPEHKRNQYSMHDIKRWLTVFLRRFFKTSQ YKRSCMANAPKVGSGGSLSPRGDWRAPSDGEASAWLAQLERIPDQAHDE
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI41393551, Length=553, Percent_Identity=23.5081374321881, Blast_Score=111, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17538756, Length=292, Percent_Identity=26.027397260274, Blast_Score=89, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6321865, Length=606, Percent_Identity=22.9372937293729, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI24641841, Length=245, Percent_Identity=26.9387755102041, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24641843, Length=245, Percent_Identity=26.9387755102041, Blast_Score=83, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 77444; Mature: 77444
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTTFFNLYNHNFIRAAVAVPEVKVADPAHNAGQTIAMMRQAWEQSALIAIFPELGLSAY CCCEEEEECCCCCEEHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEHHHCCCCC SCDDLFHQQTLLDGSMDALDAVLKASMDIPVITVVGLPLQVHSMLFNCAVVLYRGRILGV CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEE APKSFLPGYREFYELRQFVPAAYAPVEKIDLLGQQGIPFGNRLLFQVEEQPLLTFYTEIC CCHHHCCCHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHH EDVWVPIPPSSFAALAGASVLINLSASNITVGKADYRRSLVANQSGRCLSAYLYSAAGIG HHCCCCCCCCHHHHHCCCEEEEEEECCCEEECHHHHHHHHHCCCCCCHHHHHHHHHHCCC ESTTDLAWDGHGMIFENGACLGETKRFSYESQMIFADIDLDRLAQERMRQTSYGQSVLRH CCCCCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH RDEVAGFRTVRFSASLPRERVLPLERFYERFPFVPSDPSRRDERCKEVYEIQVQGLVKRF HHHHCCEEEEEECCCCCHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KATGADKMVIGVSGGLDSTQALLVCARAMDVMGLSRMHILAYTMPGFATSQRTLEQAREL HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHEEEEECCCCCHHHHHHHHHHHH IRTVGCTYHEIDIRPSCLQMLQDIGHPFFHGKPVYDITFENVQAGERTSHLFRLANQTGG HHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC LVVGTSDLSELGLGWCTYGVGDHMAHYHVNASVPKTLIQYLIRWAALTHQLGPEVSTVLM EEEECCCHHHHCCCHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH DVLETEISPELVPGKEDEDQPVQRTEDVVGPYELQDFNLYYILRLGYLPPKVAFLAWNAW HHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCEEEEHHH HDRTRHHWPDIPEHKRNQYSMHDIKRWLTVFLRRFFKTSQYKRSCMANAPKVGSGGSLSP HCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RGDWRAPSDGEASAWLAQLERIPDQAHDE CCCCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDTTFFNLYNHNFIRAAVAVPEVKVADPAHNAGQTIAMMRQAWEQSALIAIFPELGLSAY CCCEEEEECCCCCEEHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEHHHCCCCC SCDDLFHQQTLLDGSMDALDAVLKASMDIPVITVVGLPLQVHSMLFNCAVVLYRGRILGV CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEE APKSFLPGYREFYELRQFVPAAYAPVEKIDLLGQQGIPFGNRLLFQVEEQPLLTFYTEIC CCHHHCCCHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHH EDVWVPIPPSSFAALAGASVLINLSASNITVGKADYRRSLVANQSGRCLSAYLYSAAGIG HHCCCCCCCCHHHHHCCCEEEEEEECCCEEECHHHHHHHHHCCCCCCHHHHHHHHHHCCC ESTTDLAWDGHGMIFENGACLGETKRFSYESQMIFADIDLDRLAQERMRQTSYGQSVLRH CCCCCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH RDEVAGFRTVRFSASLPRERVLPLERFYERFPFVPSDPSRRDERCKEVYEIQVQGLVKRF HHHHCCEEEEEECCCCCHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KATGADKMVIGVSGGLDSTQALLVCARAMDVMGLSRMHILAYTMPGFATSQRTLEQAREL HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHEEEEECCCCCHHHHHHHHHHHH IRTVGCTYHEIDIRPSCLQMLQDIGHPFFHGKPVYDITFENVQAGERTSHLFRLANQTGG HHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC LVVGTSDLSELGLGWCTYGVGDHMAHYHVNASVPKTLIQYLIRWAALTHQLGPEVSTVLM EEEECCCHHHHCCCHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH DVLETEISPELVPGKEDEDQPVQRTEDVVGPYELQDFNLYYILRLGYLPPKVAFLAWNAW HHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCEEEEHHH HDRTRHHWPDIPEHKRNQYSMHDIKRWLTVFLRRFFKTSQYKRSCMANAPKVGSGGSLSP HCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RGDWRAPSDGEASAWLAQLERIPDQAHDE CCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]