| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580577
Identifier: 118580577
GI number: 118580577
Start: 2331104
End: 2332210
Strand: Reverse
Name: 118580577
Synonym: Ppro_2161
Alternate gene names: NA
Gene position: 2332210-2331104 (Counterclockwise)
Preceding gene: 118580580
Following gene: 118580576
Centisome position: 58.19
GC content: 58.54
Gene sequence:
>1107_bases ATGTGTCGTATTGGCGCCATAAAAAGTCTGAACTATGTGCACCCGAGCAGAGCCCTGCAGCTGATGAACTCCCAGCAGAA GGGGCATGACAATTCCGGATTCGCCATGGTCATGCAGGATCTGGGAGGAATCTTCGCCGACTACAAGGATCTGCCCACCC TCTCCCTGGCATGTACAGATGAGGGACTGAAGATCGCCGAGGGGATCCTCGGCGCCGCAGGATTCAAGCAGGTCTTTGAA TGGATTCCTGAAACCAACCGGATGCCCGGGCTTGATATCAAGGCCATGCCCAACTACGTCTTCCGCACCTTCGACTACCC GGAAACGTACGCCAAGTCCCCCGCAAAGGAGAAGGAAGAGCTGCTGACAGCCACCCGCCTCAAGCTGCGCGCGGCCATGG AACGGGGGGAGACCGGCTTTGCCTACTCCTTCTGGCCGGATGTGATCACCTTGAAGGAGATCGGCGACCCCCGGGATATC GGCACCTTCTTCGGCCTCTGGGATGAGAATGACCGGTTTACCGCCAAGGTGATCACCGCCCAGTGCCGCCAGAATACCAA CTACGCCATCGTGCGCTACGCCGCCCATCCCTTCTTTCTGCAGGGGTATACGACCCTGGCCAACGGCGAGAACACCTTCT ACCAGAAGAACAAGGAGTTCCAGGCCAGCCTGAATCCGGCCTACATCGGCTTCGAGTCCGACTCCCAGTGCTTCCTCTAT ACCCTGCACTACATGCACCGGGAACTGGGCTGGCCGCTTTCGTACTACAAGCACATCATCACCCCGCTCCCCTTCGAGGA GGTCCAGAAGCGGGAGGACCGGGAACAGCTCTCCGCCATTCGCCAGTCCCTGGCCCATCTGGAGATCAACGGACCCAACA CCATCATCGGCGCCCTGCCGGACCACACTCTGTTTGTCTGCTGCGACGCCAAGAAGCTTCGTCCCATCGTGGTGGGGCAC ACCAAGGAGATGGTGGCCTTCTCCTCCGAGGTCTGCGGGATCAACGAGATCATGCCCGATCGTGACTGGGAGACGGACAT CTATCCTAATGAACGCGAAATCGTCGTCATTGATAACACCCTGGAGGTCCAGCGATGGAAACAGTAA
Upstream 100 bases:
>100_bases CCTGTCGTGACGACACGAGAACCCGTGTACACAATCAACCCGCTGCCGGTTGCTGCCTGTCAGCCTCCGGGACAGCATAA ACCTTTGGAGGTAACCGCTC
Downstream 100 bases:
>100_bases AGATAAACGATCTGGCCTGCAATGACCTGCCCTGGAAGGTCATCTACGATACTACGCGCTGCACCCTGTGCGGCTCCTGC GTGGCGGCCTGCACCTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MCRIGAIKSLNYVHPSRALQLMNSQQKGHDNSGFAMVMQDLGGIFADYKDLPTLSLACTDEGLKIAEGILGAAGFKQVFE WIPETNRMPGLDIKAMPNYVFRTFDYPETYAKSPAKEKEELLTATRLKLRAAMERGETGFAYSFWPDVITLKEIGDPRDI GTFFGLWDENDRFTAKVITAQCRQNTNYAIVRYAAHPFFLQGYTTLANGENTFYQKNKEFQASLNPAYIGFESDSQCFLY TLHYMHRELGWPLSYYKHIITPLPFEEVQKREDREQLSAIRQSLAHLEINGPNTIIGALPDHTLFVCCDAKKLRPIVVGH TKEMVAFSSEVCGINEIMPDRDWETDIYPNEREIVVIDNTLEVQRWKQ
Sequences:
>Translated_368_residues MCRIGAIKSLNYVHPSRALQLMNSQQKGHDNSGFAMVMQDLGGIFADYKDLPTLSLACTDEGLKIAEGILGAAGFKQVFE WIPETNRMPGLDIKAMPNYVFRTFDYPETYAKSPAKEKEELLTATRLKLRAAMERGETGFAYSFWPDVITLKEIGDPRDI GTFFGLWDENDRFTAKVITAQCRQNTNYAIVRYAAHPFFLQGYTTLANGENTFYQKNKEFQASLNPAYIGFESDSQCFLY TLHYMHRELGWPLSYYKHIITPLPFEEVQKREDREQLSAIRQSLAHLEINGPNTIIGALPDHTLFVCCDAKKLRPIVVGH TKEMVAFSSEVCGINEIMPDRDWETDIYPNEREIVVIDNTLEVQRWKQ >Mature_368_residues MCRIGAIKSLNYVHPSRALQLMNSQQKGHDNSGFAMVMQDLGGIFADYKDLPTLSLACTDEGLKIAEGILGAAGFKQVFE WIPETNRMPGLDIKAMPNYVFRTFDYPETYAKSPAKEKEELLTATRLKLRAAMERGETGFAYSFWPDVITLKEIGDPRDI GTFFGLWDENDRFTAKVITAQCRQNTNYAIVRYAAHPFFLQGYTTLANGENTFYQKNKEFQASLNPAYIGFESDSQCFLY TLHYMHRELGWPLSYYKHIITPLPFEEVQKREDREQLSAIRQSLAHLEINGPNTIIGALPDHTLFVCCDAKKLRPIVVGH TKEMVAFSSEVCGINEIMPDRDWETDIYPNEREIVVIDNTLEVQRWKQ
Specific function: Unknown
COG id: COG0067
COG function: function code E; Glutamate synthase domain 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR012375 [H]
Pfam domain/function: PF00310 GATase_2 [H]
EC number: NA
Molecular weight: Translated: 42098; Mature: 42098
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRIGAIKSLNYVHPSRALQLMNSQQKGHDNSGFAMVMQDLGGIFADYKDLPTLSLACTD CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHCCCCEEEEECC EGLKIAEGILGAAGFKQVFEWIPETNRMPGLDIKAMPNYVFRTFDYPETYAKSPAKEKEE CCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEECCCCHHHHCCCCHHHHH LLTATRLKLRAAMERGETGFAYSFWPDVITLKEIGDPRDIGTFFGLWDENDRFTAKVITA HHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCEEEEEEEH QCRQNTNYAIVRYAAHPFFLQGYTTLANGENTFYQKNKEFQASLNPAYIGFESDSQCFLY HHHCCCCEEEEEEECCCEEEECEEEECCCCCCHHHCCCCCEECCCCEEEEECCCCCEEEH TLHYMHRELGWPLSYYKHIITPLPFEEVQKREDREQLSAIRQSLAHLEINGPNTIIGALP HHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCC DHTLFVCCDAKKLRPIVVGHTKEMVAFSSEVCGINEIMPDRDWETDIYPNEREIVVIDNT CCEEEEEECCCCCCEEEECCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEECCC LEVQRWKQ CCHHHCCC >Mature Secondary Structure MCRIGAIKSLNYVHPSRALQLMNSQQKGHDNSGFAMVMQDLGGIFADYKDLPTLSLACTD CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHCCCCEEEEECC EGLKIAEGILGAAGFKQVFEWIPETNRMPGLDIKAMPNYVFRTFDYPETYAKSPAKEKEE CCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEECCCCHHHHCCCCHHHHH LLTATRLKLRAAMERGETGFAYSFWPDVITLKEIGDPRDIGTFFGLWDENDRFTAKVITA HHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCEEEEEEEH QCRQNTNYAIVRYAAHPFFLQGYTTLANGENTFYQKNKEFQASLNPAYIGFESDSQCFLY HHHCCCCEEEEEEECCCEEEECEEEECCCCCCHHHCCCCCEECCCCEEEEECCCCCEEEH TLHYMHRELGWPLSYYKHIITPLPFEEVQKREDREQLSAIRQSLAHLEINGPNTIIGALP HHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCC DHTLFVCCDAKKLRPIVVGHTKEMVAFSSEVCGINEIMPDRDWETDIYPNEREIVVIDNT CCEEEEEECCCCCCEEEECCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCEEEEECCC LEVQRWKQ CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]