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The map label for this gene is tsr [C]

Identifier: 118580568

GI number: 118580568

Start: 2314755

End: 2316179

Strand: Direct

Name: tsr [C]

Synonym: Ppro_2152

Alternate gene names: 118580568

Gene position: 2314755-2316179 (Clockwise)

Preceding gene: 118580566

Following gene: 118580569

Centisome position: 57.75

GC content: 60.63

Gene sequence:

>1425_bases
GTGATTGACCAGACTGGGGTCAGAAGGAACTATTTGTCACGCGTGGCCGCAAATCCGCGCGACAATCATCAACGCGGCAT
CGAAACCACATTCGCAAAGGAGCGTAACATGAGCAGAATGGCGGGAAGTTTTGCGGGCAACAACGCCGCTAGCGGCGGTC
TTTATTCCCATCTGTACGGGTGGTACATGAGCATCAAGCTCCGCCACAAGATCGCCCTGCTGGTCGGCTGCAACCTGGCA
TTCGTCGCGGCGGCCGCCGGGGCCGGACTGCATGCGCTGCATTCGCTCTCCGCCCAGATGACCGCGGCCGGCATCGCCGC
CGAGTTCCAGCGCACGGCATCGGATGCGTTTTCACACCTGCTGATCAGCGCCGGTTCATTGTTCACTATTGCCATGATCC
TGGGGATATTCTTCGGCTACCTGGTCTTCAAGTCAGTGGCGGATCCCCTTGCCATCGTCACCGAGGTCGTGGAGGCGGTC
GAATCCGGCGATCTGACGGTGCGGGCAAGCATCCCCTACGGCGGCGGACTGGGAAGACTGGCCCTGAAGGTCAACAGCAT
GGCCGACCAGACCCTGGAGGTGATCAGCAAGCTCGCTTCGGCAATCGACCAGTTGGGATCGAGCACATCCAACCTGCGCA
CAAGCTCCACCAATCTGGAGTCAGCTGTGAGCAATGCGACGATGCAGTCGGCCACCTCGGCGTCGGCCGCCGAGGAGATG
TATTCCACGGCCGAGGAAATCGCCAGGAACTGTTCCCTGGCTGCGGAGAGCTCACGGCAGACCAGCACCGCTGCCCGCAA
CAGCGAGCAGGTCATCCTCGAGACCGCCTCGCTCATGGATAACCTGGCCCAAGGGGCGCTCAAGACCTCGGAAATCGTCC
AGAACCTGGGGAAGAGCTCGGACAAGATCGAGGAGATTGTCGACACCATCGAGGAGATTGCCGACCAGACCAACCTGCTG
GCGCTGAATGCGGCCATCGAGGCCGCCCGCGCCGGAGACCACGGCAGAGGCTTCGCGGTCGTGGCCGACGAGGTGCGCGG
CCTGGCGGAACGAACCGCTATGGCGACCAAGGAAATCTCGGTGATGATCAAGGATATCCAGAACCAGACAAAGAACGTGG
TCAGTTCAATGGAGCAGGAATCCGAGAAGGTCAGGCACGGAGCCATGGAGTCGGAAAAATCGGGTCAGGCCGTTTCGGAG
ATTCTGGATCTCGTGTCGCAACTGGACGACAAGGTCGCGCAGATCGCCACGGCAGCGGAGCAGCAGTCGGTGACTACCCG
CGAGGTGACCATGAGCCTGCAGCAGATCTCGGAAGCAGTTCACACCGCGGCTGATCAGGCCAAGAGCGGAATCCAGGAAT
CCACCTCACTGGGAGATTTGACCGAAACCCTGAAGGGGATCGTCAACAGCTACAAAACAGCCTGA

Upstream 100 bases:

>100_bases
AATGTACTACATCCTGCACGGCCTCCAACGAGGAACAGCCGAGGCCACGGAAATATCGCAGAGAAGAACTGTGCAACGAC
CCAAGGGGTAAAACGGCATT

Downstream 100 bases:

>100_bases
CATCGACACCCTTGCACCCGGTTACGTGGGCCGTTGCGACATGCTTGACTCAAACCAGAGAGAGCACGATTTCGTTATCA
GTCATTAATTACGTCTGGCA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MIDQTGVRRNYLSRVAANPRDNHQRGIETTFAKERNMSRMAGSFAGNNAASGGLYSHLYGWYMSIKLRHKIALLVGCNLA
FVAAAAGAGLHALHSLSAQMTAAGIAAEFQRTASDAFSHLLISAGSLFTIAMILGIFFGYLVFKSVADPLAIVTEVVEAV
ESGDLTVRASIPYGGGLGRLALKVNSMADQTLEVISKLASAIDQLGSSTSNLRTSSTNLESAVSNATMQSATSASAAEEM
YSTAEEIARNCSLAAESSRQTSTAARNSEQVILETASLMDNLAQGALKTSEIVQNLGKSSDKIEEIVDTIEEIADQTNLL
ALNAAIEAARAGDHGRGFAVVADEVRGLAERTAMATKEISVMIKDIQNQTKNVVSSMEQESEKVRHGAMESEKSGQAVSE
ILDLVSQLDDKVAQIATAAEQQSVTTREVTMSLQQISEAVHTAADQAKSGIQESTSLGDLTETLKGIVNSYKTA

Sequences:

>Translated_474_residues
MIDQTGVRRNYLSRVAANPRDNHQRGIETTFAKERNMSRMAGSFAGNNAASGGLYSHLYGWYMSIKLRHKIALLVGCNLA
FVAAAAGAGLHALHSLSAQMTAAGIAAEFQRTASDAFSHLLISAGSLFTIAMILGIFFGYLVFKSVADPLAIVTEVVEAV
ESGDLTVRASIPYGGGLGRLALKVNSMADQTLEVISKLASAIDQLGSSTSNLRTSSTNLESAVSNATMQSATSASAAEEM
YSTAEEIARNCSLAAESSRQTSTAARNSEQVILETASLMDNLAQGALKTSEIVQNLGKSSDKIEEIVDTIEEIADQTNLL
ALNAAIEAARAGDHGRGFAVVADEVRGLAERTAMATKEISVMIKDIQNQTKNVVSSMEQESEKVRHGAMESEKSGQAVSE
ILDLVSQLDDKVAQIATAAEQQSVTTREVTMSLQQISEAVHTAADQAKSGIQESTSLGDLTETLKGIVNSYKTA
>Mature_474_residues
MIDQTGVRRNYLSRVAANPRDNHQRGIETTFAKERNMSRMAGSFAGNNAASGGLYSHLYGWYMSIKLRHKIALLVGCNLA
FVAAAAGAGLHALHSLSAQMTAAGIAAEFQRTASDAFSHLLISAGSLFTIAMILGIFFGYLVFKSVADPLAIVTEVVEAV
ESGDLTVRASIPYGGGLGRLALKVNSMADQTLEVISKLASAIDQLGSSTSNLRTSSTNLESAVSNATMQSATSASAAEEM
YSTAEEIARNCSLAAESSRQTSTAARNSEQVILETASLMDNLAQGALKTSEIVQNLGKSSDKIEEIVDTIEEIADQTNLL
ALNAAIEAARAGDHGRGFAVVADEVRGLAERTAMATKEISVMIKDIQNQTKNVVSSMEQESEKVRHGAMESEKSGQAVSE
ILDLVSQLDDKVAQIATAAEQQSVTTREVTMSLQQISEAVHTAADQAKSGIQESTSLGDLTETLKGIVNSYKTA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=297, Percent_Identity=29.6296296296296, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788195, Length=297, Percent_Identity=30.3030303030303, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787690, Length=314, Percent_Identity=31.2101910828025, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1788194, Length=336, Percent_Identity=28.5714285714286, Blast_Score=101, Evalue=8e-23,
Organism=Escherichia coli, GI1789453, Length=129, Percent_Identity=37.2093023255814, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 50135; Mature: 50135

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDQTGVRRNYLSRVAANPRDNHQRGIETTFAKERNMSRMAGSFAGNNAASGGLYSHLYG
CCCCCHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
WYMSIKLRHKIALLVGCNLAFVAAAAGAGLHALHSLSAQMTAAGIAAEFQRTASDAFSHL
HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISAGSLFTIAMILGIFFGYLVFKSVADPLAIVTEVVEAVESGDLTVRASIPYGGGLGRL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
ALKVNSMADQTLEVISKLASAIDQLGSSTSNLRTSSTNLESAVSNATMQSATSASAAEEM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YSTAEEIARNCSLAAESSRQTSTAARNSEQVILETASLMDNLAQGALKTSEIVQNLGKSS
HHHHHHHHHHCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DKIEEIVDTIEEIADQTNLLALNAAIEAARAGDHGRGFAVVADEVRGLAERTAMATKEIS
HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
VMIKDIQNQTKNVVSSMEQESEKVRHGAMESEKSGQAVSEILDLVSQLDDKVAQIATAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QQSVTTREVTMSLQQISEAVHTAADQAKSGIQESTSLGDLTETLKGIVNSYKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDQTGVRRNYLSRVAANPRDNHQRGIETTFAKERNMSRMAGSFAGNNAASGGLYSHLYG
CCCCCHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
WYMSIKLRHKIALLVGCNLAFVAAAAGAGLHALHSLSAQMTAAGIAAEFQRTASDAFSHL
HHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISAGSLFTIAMILGIFFGYLVFKSVADPLAIVTEVVEAVESGDLTVRASIPYGGGLGRL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
ALKVNSMADQTLEVISKLASAIDQLGSSTSNLRTSSTNLESAVSNATMQSATSASAAEEM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YSTAEEIARNCSLAAESSRQTSTAARNSEQVILETASLMDNLAQGALKTSEIVQNLGKSS
HHHHHHHHHHCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DKIEEIVDTIEEIADQTNLLALNAAIEAARAGDHGRGFAVVADEVRGLAERTAMATKEIS
HHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
VMIKDIQNQTKNVVSSMEQESEKVRHGAMESEKSGQAVSEILDLVSQLDDKVAQIATAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QQSVTTREVTMSLQQISEAVHTAADQAKSGIQESTSLGDLTETLKGIVNSYKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA