| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is ybeQ [C]
Identifier: 118580259
GI number: 118580259
Start: 1979876
End: 1980961
Strand: Direct
Name: ybeQ [C]
Synonym: Ppro_1839
Alternate gene names: 118580259
Gene position: 1979876-1980961 (Clockwise)
Preceding gene: 118580258
Following gene: 118580260
Centisome position: 49.4
GC content: 48.25
Gene sequence:
>1086_bases ATGACAAAAGAGAAGATGCCTCTTTACATCTTGTTGTTTATTGTCCTGCTTCTCGGGGGGTGCAATACTTACAATACCGG AACTTGCCTGTCTGATAAAGAAATCAAAGAACTCACAGCTAAGGCTGAAAAAGGCGATCTGAATGCAGCTCGCCTCATCG AAAGTCACTACATGTTCTGCGTCGAAGATCCTAAAATGGCAAGAGTTTGGACCGAAAAGCTTGCAAGTCTCGGGGATGCA GAAGCATGGTACCACCTTTATTCGGATGACAGAAGCTCCAATGATGCGAATACAAAGAAGAAAGCATTCGCTGAACTTGT AAAGTCAGGAGAAGGCGGATATGGGTTTGCGCAGATGACCCTAGCTACCAAATACTTTACTGGTGATGAAGTTAACAAGG ACCACGCACAGGGCGAGGTGTGGCTGCGGCGTGCTGCTCAAGCGGGTAATTCTGATGCCATGCGCTCGATGAGCATTCTT TTGCTCGTCAAAGAGAGGACAAAAAATTCTATTATTGAGGCCTATAGGCTGTCGCGACATGCACAGAGGGTTGTCGACGA ACAATCTGTTGCCGGTCAAAGTGCAATGAGGCAAGCAGAAACAATACGTTTGGTTGCCAGAAAATCGCGGATTCCAGAAA AAGCTTTGGAAGCCGCAACTGCAAAACTCCCAGCGCAAAAGGAACCGAAAGCTAACGCCTCGCCTGAGCGATTTACAGCG ACAAGCGGAAGTCCACGTGCAAATGCAGAGCTGGCCGACAGGCAATATGCAGCGGGAACTAAAGAGGGGGTTGTGGCGGG TGAGGGGTTGCTGAAGTCAGCTGCCTTGGCCTGTGACAAATATGCAATGAGTGATTTTGCAACGGTAAGTCTTCTTTCTG CCACCACTGGAAAATCACTCGCAGAGGCACAATCGTGGGCTAAGCTCGTAATCTTGGATGCACCCGCCTCTTACATGGCG ACGGACGCAAGAATGAATATGGAATTTATTTCCATAGCGGCTAAATCCTTGGGAATTCCGCAAGCTACCATTTCCGAAGA GGCAGACAACCTGGTAGCCCAATCGAACTGTAGAAAGTCAAAGTAA
Upstream 100 bases:
>100_bases GCTGGCTTCTTATACATGAAACTTATCGCCTATATAGGAAACAAGTTTCTTATATAGGGAAACTCATCAATAACACGTTG TACCTGAATGAAGAATTGAA
Downstream 100 bases:
>100_bases AGGTCCAACACGCGGTTCGAACACGACTCCCTTCGGTCGCGGTTCAACCGCGGCCCCGTTGGTCTCAACAAATTAAAGGA ATAAAGAATGAGAATAGATA
Product: Sel1 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTKEKMPLYILLFIVLLLGGCNTYNTGTCLSDKEIKELTAKAEKGDLNAARLIESHYMFCVEDPKMARVWTEKLASLGDA EAWYHLYSDDRSSNDANTKKKAFAELVKSGEGGYGFAQMTLATKYFTGDEVNKDHAQGEVWLRRAAQAGNSDAMRSMSIL LLVKERTKNSIIEAYRLSRHAQRVVDEQSVAGQSAMRQAETIRLVARKSRIPEKALEAATAKLPAQKEPKANASPERFTA TSGSPRANAELADRQYAAGTKEGVVAGEGLLKSAALACDKYAMSDFATVSLLSATTGKSLAEAQSWAKLVILDAPASYMA TDARMNMEFISIAAKSLGIPQATISEEADNLVAQSNCRKSK
Sequences:
>Translated_361_residues MTKEKMPLYILLFIVLLLGGCNTYNTGTCLSDKEIKELTAKAEKGDLNAARLIESHYMFCVEDPKMARVWTEKLASLGDA EAWYHLYSDDRSSNDANTKKKAFAELVKSGEGGYGFAQMTLATKYFTGDEVNKDHAQGEVWLRRAAQAGNSDAMRSMSIL LLVKERTKNSIIEAYRLSRHAQRVVDEQSVAGQSAMRQAETIRLVARKSRIPEKALEAATAKLPAQKEPKANASPERFTA TSGSPRANAELADRQYAAGTKEGVVAGEGLLKSAALACDKYAMSDFATVSLLSATTGKSLAEAQSWAKLVILDAPASYMA TDARMNMEFISIAAKSLGIPQATISEEADNLVAQSNCRKSK >Mature_360_residues TKEKMPLYILLFIVLLLGGCNTYNTGTCLSDKEIKELTAKAEKGDLNAARLIESHYMFCVEDPKMARVWTEKLASLGDAE AWYHLYSDDRSSNDANTKKKAFAELVKSGEGGYGFAQMTLATKYFTGDEVNKDHAQGEVWLRRAAQAGNSDAMRSMSILL LVKERTKNSIIEAYRLSRHAQRVVDEQSVAGQSAMRQAETIRLVARKSRIPEKALEAATAKLPAQKEPKANASPERFTAT SGSPRANAELADRQYAAGTKEGVVAGEGLLKSAALACDKYAMSDFATVSLLSATTGKSLAEAQSWAKLVILDAPASYMAT DARMNMEFISIAAKSLGIPQATISEEADNLVAQSNCRKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39271; Mature: 39140
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEKMPLYILLFIVLLLGGCNTYNTGTCLSDKEIKELTAKAEKGDLNAARLIESHYMFC CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCEEE VEDPKMARVWTEKLASLGDAEAWYHLYSDDRSSNDANTKKKAFAELVKSGEGGYGFAQMT ECCCHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH LATKYFTGDEVNKDHAQGEVWLRRAAQAGNSDAMRSMSILLLVKERTKNSIIEAYRLSRH HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHH AQRVVDEQSVAGQSAMRQAETIRLVARKSRIPEKALEAATAKLPAQKEPKANASPERFTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEC TSGSPRANAELADRQYAAGTKEGVVAGEGLLKSAALACDKYAMSDFATVSLLSATTGKSL CCCCCCCCCHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AEAQSWAKLVILDAPASYMATDARMNMEFISIAAKSLGIPQATISEEADNLVAQSNCRKS HHHHCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC K C >Mature Secondary Structure TKEKMPLYILLFIVLLLGGCNTYNTGTCLSDKEIKELTAKAEKGDLNAARLIESHYMFC CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCEEE VEDPKMARVWTEKLASLGDAEAWYHLYSDDRSSNDANTKKKAFAELVKSGEGGYGFAQMT ECCCHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH LATKYFTGDEVNKDHAQGEVWLRRAAQAGNSDAMRSMSILLLVKERTKNSIIEAYRLSRH HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHH AQRVVDEQSVAGQSAMRQAETIRLVARKSRIPEKALEAATAKLPAQKEPKANASPERFTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEC TSGSPRANAELADRQYAAGTKEGVVAGEGLLKSAALACDKYAMSDFATVSLLSATTGKSL CCCCCCCCCHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AEAQSWAKLVILDAPASYMATDARMNMEFISIAAKSLGIPQATISEEADNLVAQSNCRKS HHHHCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA