| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580258
Identifier: 118580258
GI number: 118580258
Start: 1979315
End: 1979755
Strand: Direct
Name: 118580258
Synonym: Ppro_1838
Alternate gene names: NA
Gene position: 1979315-1979755 (Clockwise)
Preceding gene: 118580257
Following gene: 118580259
Centisome position: 49.38
GC content: 53.51
Gene sequence:
>441_bases TTGAGCCGTTTTGTCAGTGTGGTCACTGGTGGAGCGGCTTTTTTGTGCGTGGATGCGGGAGGGATCATGCTGAAGGACAT GAAATCGTACTGCCACGTCAAGCCGGGACAAAAGGGGTCCAAGAGGCTGGTGGAGCAGTATGGGGACAGGCTTCTGTGTG TAAGATACCGTTACGATGAAAAGCGCCGCATCAGGTTGAAGACCGTGGAAATCATCGTCGAAGAACGCCCATGGCAGCCA CCATTTCGGTATTGCGACAACGAGCTGGTGCCACTGACGGTCGGGTACGAAGAAACTGAATTGCGGGAAAAGCTCCGGGG GTTGCGGGCGAAATGGGATCCTGATGCAAGGGTATGGCTGGTACCATATGGAAAGATCAAGGGTACGGAGCTGGAGAAGA GGATTTTCGATGAAGATCTGGCCGGGAGGAAAAAGGTGTAA
Upstream 100 bases:
>100_bases GCTGGTTGCCCTTGACTCACCTCGCCATGAAGTGTAGTTTATGAAAACTTGTTAGCATGTGGTCCTGGAGGGACAATTTG AGAGGCAGTGCTTGGTTTAG
Downstream 100 bases:
>100_bases GTTGCCGATACAGGTAACCGGCTGGCTTCTTATACATGAAACTTATCGCCTATATAGGAAACAAGTTTCTTATATAGGGA AACTCATCAATAACACGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSRFVSVVTGGAAFLCVDAGGIMLKDMKSYCHVKPGQKGSKRLVEQYGDRLLCVRYRYDEKRRIRLKTVEIIVEERPWQP PFRYCDNELVPLTVGYEETELREKLRGLRAKWDPDARVWLVPYGKIKGTELEKRIFDEDLAGRKKV
Sequences:
>Translated_146_residues MSRFVSVVTGGAAFLCVDAGGIMLKDMKSYCHVKPGQKGSKRLVEQYGDRLLCVRYRYDEKRRIRLKTVEIIVEERPWQP PFRYCDNELVPLTVGYEETELREKLRGLRAKWDPDARVWLVPYGKIKGTELEKRIFDEDLAGRKKV >Mature_145_residues SRFVSVVTGGAAFLCVDAGGIMLKDMKSYCHVKPGQKGSKRLVEQYGDRLLCVRYRYDEKRRIRLKTVEIIVEERPWQPP FRYCDNELVPLTVGYEETELREKLRGLRAKWDPDARVWLVPYGKIKGTELEKRIFDEDLAGRKKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17053; Mature: 16922
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFVSVVTGGAAFLCVDAGGIMLKDMKSYCHVKPGQKGSKRLVEQYGDRLLCVRYRYDE CCCEEEEEECCEEEEEEECCCEEHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEEECCC KRRIRLKTVEIIVEERPWQPPFRYCDNELVPLTVGYEETELREKLRGLRAKWDPDARVWL CCEEEEEEEEEEEECCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEE VPYGKIKGTELEKRIFDEDLAGRKKV EECCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRFVSVVTGGAAFLCVDAGGIMLKDMKSYCHVKPGQKGSKRLVEQYGDRLLCVRYRYDE CCEEEEEECCEEEEEEECCCEEHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEEECCC KRRIRLKTVEIIVEERPWQPPFRYCDNELVPLTVGYEETELREKLRGLRAKWDPDARVWL CCEEEEEEEEEEEECCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEE VPYGKIKGTELEKRIFDEDLAGRKKV EECCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA