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The map label for this gene is recJ [H]

Identifier: 118580215

GI number: 118580215

Start: 1920749

End: 1922455

Strand: Reverse

Name: recJ [H]

Synonym: Ppro_1795

Alternate gene names: 118580215

Gene position: 1922455-1920749 (Counterclockwise)

Preceding gene: 118580216

Following gene: 118580214

Centisome position: 47.97

GC content: 65.85

Gene sequence:

>1707_bases
ATGCAGAAGAAACAGTGGATTGTGCGAACAGCGCCGGTCGAATTGCCGGCCATGGCGGGGGAGAAGGCCATCCTGCCGCT
GACCGCTGCCATACTTGCCGGCCGCGGGATCAGTGAGCCCGATGCCATGGACGCCTTCCTGTCCCCCTCCCTGGCGGACA
TGCTCGACCCTTCCCGCATGAAAGGGATGGCCGACGCCGTGGCACGCCTGCTGGAGGCGCGCCGCAGGCAGGAAAAGATC
ACCGTCTACGGCGACTACGACGTGGACGGCATCACCGGGACCACGCTGCTGGTGTCGTTTCTGCGGCAGACCGGATTTGA
CTGCGACTACTTCATCCCCAACCGTTTCGACGACGGCTACGGCCTGAACGGCGAGGCACTGGACAGGATCATCAACGCCG
GGGCGGCCCTTATCCTGTCGGTGGACTGCGGCATCACGGCGGTTGAGGAGGCGCTCTTCTGTCGCCAGCGGGGAGCGGAG
CTGATCATCGTCGATCATCACGCCCCCAAAGAGACCCTTCCCGATGCCTGCGCCGTGCTGAATCCGCTGCAGTCGGGATG
CGACTATGCCTTCAAATGCCTGGCCGGGGTCGGCGTGGCCTTCAACCTGCTGGTTGCGCTCAGGGCGGCGCTGCGCGACC
AGGGATCCTTTGGCAGCGATTCCGGCCCGGACCTGCGCCAGTGGCTGGACCTGGTGGCCCTGGGAACCATCGCCGACGTG
GTGCCGCTCATCGGCCAGAACCGCATCTACGTCACCCATGGGCTGCGACTCTTGGCCGCTCCGTGCAAGCCGGGCATCCA
GGCTCTCAAGAAGGTGGCCGGGGTAGGGGGGGCGGTGAGCAGTGGTCAGGTCGGTTTCCGGCTTGCGCCGCGCCTGAACG
CCGCCGGCCGCATGGAGAGCGCCGTACCCGGCGTGGAACTGCTGCTGGGAGACGACCCGCCGCACTGTCTGGCCATTGCC
GAGGAACTGGACGCTGCCAATGGCGAGCGCCAGGCCATCGAACGCGCCATACTCCAGGAGGCGATCAGCCTCGTGGAGCA
GGGGGGGAACTACCCCGACAGGCGCAGCATCGTGCTGGCCTCCCCGTCCTGGCACCAGGGGGTGGTGGGCATCGTCGCCT
CACGCCTGGCGGAACGTTTCCACCGACCAACCATCCTGATCGCCCTGGACGAACAAGGGCAGGGGAAGGGGTCGGGCCGC
AGCATCCCCGGCTTCCACCTTCTGGATGCGCTTAAGGTCTGTTCACCCCTCCTGGAGCGCTTCGGCGGCCACCGCCATGC
CGTGGGTGTCTCCCTCTCCGGAGAGAGGGTCGACGACTTCAGCGCAACATTCGAGGCCGAGGCGCGGCGTCTTCTGGGCA
ACGGGGAACTGATGCCCCGCCTGGATATCGATGCCGAGGCCGAACCGCGGGAGGTGACCAAAGAGCTGGCGCTGGAACTG
AAGCGCCTGGAGCCCTTCGGCATGGGCAACCCGGAACCGCTGCTTATGATGCGCTCCCTGACCGTGCTGGAGCAGCGGGT
GGTGGGAGAGGATCACCTGCGGCTGCGCTTGTCCAGGGACGACCATGTCTTCAATGCCATCGCCTTCCGCATGGCTTCGC
GCACTGTTTCTGAAACCATCGACATCGCCTTTTTCCCCGAGATGAACCAATGGAATGGCAGCTCCACCCTGCAGTTGCGG
GTCAAGGACCTGCGCCCCACGGAGTAG

Upstream 100 bases:

>100_bases
CATGACACGGCAGGGGGATCACCCGGCCAGGAAATAACCCGCATCCCCCGCCCGACGGGGGATTTTTTTGTCCGCGGCAG
GCAGATCGCAAAGGAAAACC

Downstream 100 bases:

>100_bases
ACCATGCAACGCGATCAACGATTCGACAGCGCCGACAGGATCATCAAGGTCGGCTTCTGGGTCAACGCCCTGCTGATGGT
TTTCAAGCTGTCGGCCGGCC

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MQKKQWIVRTAPVELPAMAGEKAILPLTAAILAGRGISEPDAMDAFLSPSLADMLDPSRMKGMADAVARLLEARRRQEKI
TVYGDYDVDGITGTTLLVSFLRQTGFDCDYFIPNRFDDGYGLNGEALDRIINAGAALILSVDCGITAVEEALFCRQRGAE
LIIVDHHAPKETLPDACAVLNPLQSGCDYAFKCLAGVGVAFNLLVALRAALRDQGSFGSDSGPDLRQWLDLVALGTIADV
VPLIGQNRIYVTHGLRLLAAPCKPGIQALKKVAGVGGAVSSGQVGFRLAPRLNAAGRMESAVPGVELLLGDDPPHCLAIA
EELDAANGERQAIERAILQEAISLVEQGGNYPDRRSIVLASPSWHQGVVGIVASRLAERFHRPTILIALDEQGQGKGSGR
SIPGFHLLDALKVCSPLLERFGGHRHAVGVSLSGERVDDFSATFEAEARRLLGNGELMPRLDIDAEAEPREVTKELALEL
KRLEPFGMGNPEPLLMMRSLTVLEQRVVGEDHLRLRLSRDDHVFNAIAFRMASRTVSETIDIAFFPEMNQWNGSSTLQLR
VKDLRPTE

Sequences:

>Translated_568_residues
MQKKQWIVRTAPVELPAMAGEKAILPLTAAILAGRGISEPDAMDAFLSPSLADMLDPSRMKGMADAVARLLEARRRQEKI
TVYGDYDVDGITGTTLLVSFLRQTGFDCDYFIPNRFDDGYGLNGEALDRIINAGAALILSVDCGITAVEEALFCRQRGAE
LIIVDHHAPKETLPDACAVLNPLQSGCDYAFKCLAGVGVAFNLLVALRAALRDQGSFGSDSGPDLRQWLDLVALGTIADV
VPLIGQNRIYVTHGLRLLAAPCKPGIQALKKVAGVGGAVSSGQVGFRLAPRLNAAGRMESAVPGVELLLGDDPPHCLAIA
EELDAANGERQAIERAILQEAISLVEQGGNYPDRRSIVLASPSWHQGVVGIVASRLAERFHRPTILIALDEQGQGKGSGR
SIPGFHLLDALKVCSPLLERFGGHRHAVGVSLSGERVDDFSATFEAEARRLLGNGELMPRLDIDAEAEPREVTKELALEL
KRLEPFGMGNPEPLLMMRSLTVLEQRVVGEDHLRLRLSRDDHVFNAIAFRMASRTVSETIDIAFFPEMNQWNGSSTLQLR
VKDLRPTE
>Mature_568_residues
MQKKQWIVRTAPVELPAMAGEKAILPLTAAILAGRGISEPDAMDAFLSPSLADMLDPSRMKGMADAVARLLEARRRQEKI
TVYGDYDVDGITGTTLLVSFLRQTGFDCDYFIPNRFDDGYGLNGEALDRIINAGAALILSVDCGITAVEEALFCRQRGAE
LIIVDHHAPKETLPDACAVLNPLQSGCDYAFKCLAGVGVAFNLLVALRAALRDQGSFGSDSGPDLRQWLDLVALGTIADV
VPLIGQNRIYVTHGLRLLAAPCKPGIQALKKVAGVGGAVSSGQVGFRLAPRLNAAGRMESAVPGVELLLGDDPPHCLAIA
EELDAANGERQAIERAILQEAISLVEQGGNYPDRRSIVLASPSWHQGVVGIVASRLAERFHRPTILIALDEQGQGKGSGR
SIPGFHLLDALKVCSPLLERFGGHRHAVGVSLSGERVDDFSATFEAEARRLLGNGELMPRLDIDAEAEPREVTKELALEL
KRLEPFGMGNPEPLLMMRSLTVLEQRVVGEDHLRLRLSRDDHVFNAIAFRMASRTVSETIDIAFFPEMNQWNGSSTLQLR
VKDLRPTE

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=572, Percent_Identity=38.986013986014, Blast_Score=340, Evalue=1e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 61509; Mature: 61509

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKQWIVRTAPVELPAMAGEKAILPLTAAILAGRGISEPDAMDAFLSPSLADMLDPSRM
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCHHHH
KGMADAVARLLEARRRQEKITVYGDYDVDGITGTTLLVSFLRQTGFDCDYFIPNRFDDGY
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GLNGEALDRIINAGAALILSVDCGITAVEEALFCRQRGAELIIVDHHAPKETLPDACAVL
CCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHCCHHHHHH
NPLQSGCDYAFKCLAGVGVAFNLLVALRAALRDQGSFGSDSGPDLRQWLDLVALGTIADV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VPLIGQNRIYVTHGLRLLAAPCKPGIQALKKVAGVGGAVSSGQVGFRLAPRLNAAGRMES
HHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHH
AVPGVELLLGDDPPHCLAIAEELDAANGERQAIERAILQEAISLVEQGGNYPDRRSIVLA
CCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
SPSWHQGVVGIVASRLAERFHRPTILIALDEQGQGKGSGRSIPGFHLLDALKVCSPLLER
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FGGHRHAVGVSLSGERVDDFSATFEAEARRLLGNGELMPRLDIDAEAEPREVTKELALEL
HCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHH
KRLEPFGMGNPEPLLMMRSLTVLEQRVVGEDHLRLRLSRDDHVFNAIAFRMASRTVSETI
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHE
DIAFFPEMNQWNGSSTLQLRVKDLRPTE
EEEECCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MQKKQWIVRTAPVELPAMAGEKAILPLTAAILAGRGISEPDAMDAFLSPSLADMLDPSRM
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCHHHH
KGMADAVARLLEARRRQEKITVYGDYDVDGITGTTLLVSFLRQTGFDCDYFIPNRFDDGY
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GLNGEALDRIINAGAALILSVDCGITAVEEALFCRQRGAELIIVDHHAPKETLPDACAVL
CCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCHHHCCHHHHHH
NPLQSGCDYAFKCLAGVGVAFNLLVALRAALRDQGSFGSDSGPDLRQWLDLVALGTIADV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VPLIGQNRIYVTHGLRLLAAPCKPGIQALKKVAGVGGAVSSGQVGFRLAPRLNAAGRMES
HHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHH
AVPGVELLLGDDPPHCLAIAEELDAANGERQAIERAILQEAISLVEQGGNYPDRRSIVLA
CCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
SPSWHQGVVGIVASRLAERFHRPTILIALDEQGQGKGSGRSIPGFHLLDALKVCSPLLER
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FGGHRHAVGVSLSGERVDDFSATFEAEARRLLGNGELMPRLDIDAEAEPREVTKELALEL
HCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHH
KRLEPFGMGNPEPLLMMRSLTVLEQRVVGEDHLRLRLSRDDHVFNAIAFRMASRTVSETI
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHE
DIAFFPEMNQWNGSSTLQLRVKDLRPTE
EEEECCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]