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The map label for this gene is ydfM [H]

Identifier: 118580214

GI number: 118580214

Start: 1919846

End: 1920745

Strand: Reverse

Name: ydfM [H]

Synonym: Ppro_1794

Alternate gene names: 118580214

Gene position: 1920745-1919846 (Counterclockwise)

Preceding gene: 118580215

Following gene: 118580212

Centisome position: 47.92

GC content: 61.44

Gene sequence:

>900_bases
ATGCAACGCGATCAACGATTCGACAGCGCCGACAGGATCATCAAGGTCGGCTTCTGGGTCAACGCCCTGCTGATGGTTTT
CAAGCTGTCGGCCGGCCATTGGGGGCGTTCCGACGCCGTGTTCGCCGACGGCATCGAAAGCGCCTGCGATTTCGTGGCCA
TATTCTCCACCATGGTGGCGCTCAGGCTGGGGAGGCAGCCCTTTGACGAGAAACACCCCTACGGCCATGGCCGGGCCGAG
AGCCTGTCGGCGCTTTTGATCTCGCTGGTGATCCTGGCCACCGGTGGCTGGATCCTCTACGACTCGGTGGTTTCCATCAT
CCGCCATGACTTCAAATCTCCCGGCATGATCGCCGTGGCCGCGGCGTTTGTCACCATCCTGGTCAAGGAGTGGCTCTACC
GTTTCACCCAGAAGACCGGCCGGGAGCTGGAGAGCCCCTCCCTGCTGGCCATCGCCAAAGACCACCGCAAGGATGCCCTC
ACCTCCATCTCCACCCTGGCCGGTGTCCTGGGCGCCTTCTTCGGTTTCGGCATCATGGACCCGCTGGCCGCCGGCCTGAC
TTCGTTCTTTATCCTGCACATCGGCCTGGAGACCTACCGGGGGGCGGCCCACGACCTGATGGACGGCAGCGTGCCGGTCA
ATTTCATCGAGAAGGTCACCCAACTGGCCGAGAGCGTGGAGCGGGTTGAGCATGTGCACGACATCCGCGGCCGCCGCTCA
GGCCAGTACATGATCATCGATCTCAAGCTGGACATGGACCCGGCCATGACGGTCAAGGAGTCCCACGACATCGCCAAGCA
GGTCAAGAAGCTGATCTTCGATGGATTTCCCAACGTGGGGGATGTGATGATCCACATCAACCCCCACGACGAGGAACATG
AGGATATGATCAGGCTGTGA

Upstream 100 bases:

>100_bases
TGAAACCATCGACATCGCCTTTTTCCCCGAGATGAACCAATGGAATGGCAGCTCCACCCTGCAGTTGCGGGTCAAGGACC
TGCGCCCCACGGAGTAGACC

Downstream 100 bases:

>100_bases
CGCGCCCCGCTTTCAGTACAGCCTGACCAGCAGGAAGAGTCCCAGCATGGCGATGGCGATGGCCAGTTTGCCGGCCACTC
CAATCGCCAGCCCAACCACG

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MQRDQRFDSADRIIKVGFWVNALLMVFKLSAGHWGRSDAVFADGIESACDFVAIFSTMVALRLGRQPFDEKHPYGHGRAE
SLSALLISLVILATGGWILYDSVVSIIRHDFKSPGMIAVAAAFVTILVKEWLYRFTQKTGRELESPSLLAIAKDHRKDAL
TSISTLAGVLGAFFGFGIMDPLAAGLTSFFILHIGLETYRGAAHDLMDGSVPVNFIEKVTQLAESVERVEHVHDIRGRRS
GQYMIIDLKLDMDPAMTVKESHDIAKQVKKLIFDGFPNVGDVMIHINPHDEEHEDMIRL

Sequences:

>Translated_299_residues
MQRDQRFDSADRIIKVGFWVNALLMVFKLSAGHWGRSDAVFADGIESACDFVAIFSTMVALRLGRQPFDEKHPYGHGRAE
SLSALLISLVILATGGWILYDSVVSIIRHDFKSPGMIAVAAAFVTILVKEWLYRFTQKTGRELESPSLLAIAKDHRKDAL
TSISTLAGVLGAFFGFGIMDPLAAGLTSFFILHIGLETYRGAAHDLMDGSVPVNFIEKVTQLAESVERVEHVHDIRGRRS
GQYMIIDLKLDMDPAMTVKESHDIAKQVKKLIFDGFPNVGDVMIHINPHDEEHEDMIRL
>Mature_299_residues
MQRDQRFDSADRIIKVGFWVNALLMVFKLSAGHWGRSDAVFADGIESACDFVAIFSTMVALRLGRQPFDEKHPYGHGRAE
SLSALLISLVILATGGWILYDSVVSIIRHDFKSPGMIAVAAAFVTILVKEWLYRFTQKTGRELESPSLLAIAKDHRKDAL
TSISTLAGVLGAFFGFGIMDPLAAGLTSFFILHIGLETYRGAAHDLMDGSVPVNFIEKVTQLAESVERVEHVHDIRGRRS
GQYMIIDLKLDMDPAMTVKESHDIAKQVKKLIFDGFPNVGDVMIHINPHDEEHEDMIRL

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=267, Percent_Identity=25.8426966292135, Blast_Score=101, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI72000060, Length=313, Percent_Identity=24.9201277955272, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI72000062, Length=313, Percent_Identity=24.9201277955272, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17553664, Length=321, Percent_Identity=25.5451713395639, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6325032, Length=226, Percent_Identity=26.9911504424779, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323831, Length=230, Percent_Identity=26.9565217391304, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 33294; Mature: 33294

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRDQRFDSADRIIKVGFWVNALLMVFKLSAGHWGRSDAVFADGIESACDFVAIFSTMVA
CCCCCCCCCHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LRLGRQPFDEKHPYGHGRAESLSALLISLVILATGGWILYDSVVSIIRHDFKSPGMIAVA
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
AAFVTILVKEWLYRFTQKTGRELESPSLLAIAKDHRKDALTSISTLAGVLGAFFGFGIMD
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLAAGLTSFFILHIGLETYRGAAHDLMDGSVPVNFIEKVTQLAESVERVEHVHDIRGRRS
HHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GQYMIIDLKLDMDPAMTVKESHDIAKQVKKLIFDGFPNVGDVMIHINPHDEEHEDMIRL
CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHCC
>Mature Secondary Structure
MQRDQRFDSADRIIKVGFWVNALLMVFKLSAGHWGRSDAVFADGIESACDFVAIFSTMVA
CCCCCCCCCHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LRLGRQPFDEKHPYGHGRAESLSALLISLVILATGGWILYDSVVSIIRHDFKSPGMIAVA
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
AAFVTILVKEWLYRFTQKTGRELESPSLLAIAKDHRKDALTSISTLAGVLGAFFGFGIMD
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLAAGLTSFFILHIGLETYRGAAHDLMDGSVPVNFIEKVTQLAESVERVEHVHDIRGRRS
HHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GQYMIIDLKLDMDPAMTVKESHDIAKQVKKLIFDGFPNVGDVMIHINPHDEEHEDMIRL
CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]