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The map label for this gene is ywlF [H]

Identifier: 118580167

GI number: 118580167

Start: 1879022

End: 1879468

Strand: Direct

Name: ywlF [H]

Synonym: Ppro_1747

Alternate gene names: 118580167

Gene position: 1879022-1879468 (Clockwise)

Preceding gene: 118580166

Following gene: 118580168

Centisome position: 46.88

GC content: 59.28

Gene sequence:

>447_bases
ATGATTGTAATTGGCAGCGATCACGGCGGGCTTGACCTCAAGCAGGCGCTGACGCGCTACCTGGCCGATCGCGCTATCAA
AGTCAGCGACATCGGCACCGATAACGGTGATTCCGTGGATTATCCCCGCTTCGGCCTCAAGGTGGCCGAGATGGTGGCTT
CCGGCTCTGCCGACCGCGGGATTCTCGTCTGCGGCACAGGAATCGGCATGTCCATTGCCGCTAACAAGGTTCCCGGAATA
CGGGCCGCACTGGCCACGGATGTCTTCATGGGCCGCATGGCCAAGGAGCACAACAACGCCAATATACTGGTGCTGGGAGG
TCGCGTGCTGGACGAGCAGGAGGCCTGTGACATCGTCGGTGTCTGGCTGGACGCAACCTTCGAGGGGGGGCGCCATCAGG
GCAGGCTTGACCAGATCGCTGAAATAGAGAAAAAGTACTGTAAATAA

Upstream 100 bases:

>100_bases
CCCGCAACGCTAGTATTGAATATGCCATGAGCAATTCACTCGGTTTCGGCGGTACCAACGCAACGCTTCTGTTCAAGAAG
ATCTAGTCGGGGGATCTCTC

Downstream 100 bases:

>100_bases
GGTTGTTATCATAGATTGTATCGAGCGGGACTTTAATAGAGTCCCGCTTCGTGTTTCCGGAAAAAACTGCGGAGAATCAC
ATTTACAAGGAGATACCATG

Product: RpiB/LacA/LacB family sugar-phosphate isomerase

Products: D-ribulose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MIVIGSDHGGLDLKQALTRYLADRAIKVSDIGTDNGDSVDYPRFGLKVAEMVASGSADRGILVCGTGIGMSIAANKVPGI
RAALATDVFMGRMAKEHNNANILVLGGRVLDEQEACDIVGVWLDATFEGGRHQGRLDQIAEIEKKYCK

Sequences:

>Translated_148_residues
MIVIGSDHGGLDLKQALTRYLADRAIKVSDIGTDNGDSVDYPRFGLKVAEMVASGSADRGILVCGTGIGMSIAANKVPGI
RAALATDVFMGRMAKEHNNANILVLGGRVLDEQEACDIVGVWLDATFEGGRHQGRLDQIAEIEKKYCK
>Mature_148_residues
MIVIGSDHGGLDLKQALTRYLADRAIKVSDIGTDNGDSVDYPRFGLKVAEMVASGSADRGILVCGTGIGMSIAANKVPGI
RAALATDVFMGRMAKEHNNANILVLGGRVLDEQEACDIVGVWLDATFEGGRHQGRLDQIAEIEKKYCK

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=144, Percent_Identity=43.75, Blast_Score=133, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: 5.3.1.6

Molecular weight: Translated: 15775; Mature: 15775

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVIGSDHGGLDLKQALTRYLADRAIKVSDIGTDNGDSVDYPRFGLKVAEMVASGSADRG
CEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
ILVCGTGIGMSIAANKVPGIRAALATDVFMGRMAKEHNNANILVLGGRVLDEQEACDIVG
EEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCEEE
VWLDATFEGGRHQGRLDQIAEIEKKYCK
EEEEEEECCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVIGSDHGGLDLKQALTRYLADRAIKVSDIGTDNGDSVDYPRFGLKVAEMVASGSADRG
CEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
ILVCGTGIGMSIAANKVPGIRAALATDVFMGRMAKEHNNANILVLGGRVLDEQEACDIVG
EEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCEEE
VWLDATFEGGRHQGRLDQIAEIEKKYCK
EEEEEEECCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 4.4 {D-ribose} 0.83 {D-ribose} [C]

Substrates: D-ribose 5-phosphate

Specific reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate

General reaction: Intramolecular oxidoreduction; Isomerization [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]