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The map label for this gene is scpB [H]

Identifier: 118580111

GI number: 118580111

Start: 1816348

End: 1816968

Strand: Direct

Name: scpB [H]

Synonym: Ppro_1690

Alternate gene names: 118580111

Gene position: 1816348-1816968 (Clockwise)

Preceding gene: 118580110

Following gene: 118580112

Centisome position: 45.32

GC content: 59.74

Gene sequence:

>621_bases
ATGAATCTGTCGGCTGTTGTTGAAAGTGTCATCTTCAGCGCGGACACGCCCCTGTCGCTGGACAAACTGTGCGAACTGCT
CCCCGAGTACGAGCGGGGCGCCATCAGGGATGTACTGCGCGATCTGGTCTCACTGCATGAGGTGAGGAACGGGGGCTTTC
AGCTGGTCAACATTGCCGGCGGATGGCAGTTTCGTACCCCATCCTCCCTCCAGCAGTATGTGGTTCGCAACGTCAAGGCA
AAGTCGGCCAAGTTTTCCCAGTCCTCCCTGGAAACCCTGGCCATCGTGGCCTATCGCCAACCGGTGACCCGCGCCGAAAT
AGAGTACCTGCGCGGCGTGGATTGCGGCGGCGTGCTGAGAACCCTGCTGGAGAGGAAACTGATCCGTATCCTGGGAAAGA
AGGACATCCCGGGTCGGCCGTTGATCTACGGCACCTCCAGGGAATTCCTGGAGGTCTTTGGTCTGAAAGACCTGAAGAGC
CTTCCCACCCTGAAGGAGATCCAGGCCCTGGACGATGTTCCCCTGTTTGAGCGGCAGGAGGAACTGTTGCTGGATGGTGT
CGGCGCTGCTTCCACCCTGACCCAGGTCGCCCTTGACCTGCAGGGAGAACCGGAGCAGTGA

Upstream 100 bases:

>100_bases
CCGATTCCGCTGCAGGCGACCCGCTGCCCGCACTGCACGTCAAACCTGAAGTAAGCAAGAGGGAAACAGCCTCTTTCATG
TCTAAAAACGGACGCTTTTG

Downstream 100 bases:

>100_bases
TGTCCCGGGCACCCTTTCCGCTGTAATCCGAAAAAAAGCGACTCCCGGGGAAGAGCCAAACTTCGGGTGAGAACAGGAGA
TTTCTGAGTACTGACTTTCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNLSAVVESVIFSADTPLSLDKLCELLPEYERGAIRDVLRDLVSLHEVRNGGFQLVNIAGGWQFRTPSSLQQYVVRNVKA
KSAKFSQSSLETLAIVAYRQPVTRAEIEYLRGVDCGGVLRTLLERKLIRILGKKDIPGRPLIYGTSREFLEVFGLKDLKS
LPTLKEIQALDDVPLFERQEELLLDGVGAASTLTQVALDLQGEPEQ

Sequences:

>Translated_206_residues
MNLSAVVESVIFSADTPLSLDKLCELLPEYERGAIRDVLRDLVSLHEVRNGGFQLVNIAGGWQFRTPSSLQQYVVRNVKA
KSAKFSQSSLETLAIVAYRQPVTRAEIEYLRGVDCGGVLRTLLERKLIRILGKKDIPGRPLIYGTSREFLEVFGLKDLKS
LPTLKEIQALDDVPLFERQEELLLDGVGAASTLTQVALDLQGEPEQ
>Mature_206_residues
MNLSAVVESVIFSADTPLSLDKLCELLPEYERGAIRDVLRDLVSLHEVRNGGFQLVNIAGGWQFRTPSSLQQYVVRNVKA
KSAKFSQSSLETLAIVAYRQPVTRAEIEYLRGVDCGGVLRTLLERKLIRILGKKDIPGRPLIYGTSREFLEVFGLKDLKS
LPTLKEIQALDDVPLFERQEELLLDGVGAASTLTQVALDLQGEPEQ

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 22910; Mature: 22910

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSAVVESVIFSADTPLSLDKLCELLPEYERGAIRDVLRDLVSLHEVRNGGFQLVNIAG
CCHHHHHHHHHHCCCCCCCHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECC
GWQFRTPSSLQQYVVRNVKAKSAKFSQSSLETLAIVAYRQPVTRAEIEYLRGVDCGGVLR
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
TLLERKLIRILGKKDIPGRPLIYGTSREFLEVFGLKDLKSLPTLKEIQALDDVPLFERQE
HHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHCHHHHHHCCCHHHHHHHCCCCHHHHHH
ELLLDGVGAASTLTQVALDLQGEPEQ
HHHHHCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNLSAVVESVIFSADTPLSLDKLCELLPEYERGAIRDVLRDLVSLHEVRNGGFQLVNIAG
CCHHHHHHHHHHCCCCCCCHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECC
GWQFRTPSSLQQYVVRNVKAKSAKFSQSSLETLAIVAYRQPVTRAEIEYLRGVDCGGVLR
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
TLLERKLIRILGKKDIPGRPLIYGTSREFLEVFGLKDLKSLPTLKEIQALDDVPLFERQE
HHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHCHHHHHHCCCHHHHHHHCCCCHHHHHH
ELLLDGVGAASTLTQVALDLQGEPEQ
HHHHHCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA