| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579944
Identifier: 118579944
GI number: 118579944
Start: 1625263
End: 1626588
Strand: Reverse
Name: 118579944
Synonym: Ppro_1521
Alternate gene names: NA
Gene position: 1626588-1625263 (Counterclockwise)
Preceding gene: 118579945
Following gene: 118579943
Centisome position: 40.58
GC content: 67.72
Gene sequence:
>1326_bases ATGCAACAGCAGACAAGCAGGCAGAAGAGCGCCACAATCCGCATCCCCTTCAGCGCCCCCTTCCTCCCCCTGGCCATGGA ATTCGCCGAGCGCGGGGCGCATGGCTTCGGTTATGGCGACCGGGAAGCCACCGGGCTGGTGCTGGCGGTGGAGGAACTGT TCTCCTTCTACAGCCGCCGGGCAGCCGCGGATTCCACGGCTGAGATCGAACTGGAGGACCAGGGCTACCGCCTGTGCCTC ACCCTCTCCTTCGCCACCGCCAACCCGGACATGCGCGCCTTCAACCTGACCTGGCGGGTTAGCCATGACAGCGAGGAATC GCTGGACATGCTGGGGCCGATGATCGCCGCCCGCAGCGTATCCAGCCTGCGCCTGGACTTTGGCGGCAACGAACGGGTGG CGATCCGCATGACCCGCGACCGGGACTACCCGGCAGTCGGCGCCGCGGAACTCCCGCCTGCCGATCTTATCGGCACGGTC CGCCTGAGCTCCCCCACGGCAGACGACCTGCGGCATTTCGCCGCCATGGTGACCGCCTCCGCCTCCCCGTTCACCCCCCT CTTCCTGGCCCGCCCGGGCATGGCGGCCGACATGCTGGCGGCCGGCCACTTAAACGCGCTTTTGGCAATGAGTAACGACT GGATCGTCGGCGGCGTACTCTGGCGGCCGCTGACGGAAACCTGCACAGAACTGTTCGGTCCCTACCTGTTCACCTGCGAC CCGGAAGACCGCACCCTGACCATGCTGATGGACGAGGCCTTCGGACGCATCTCCCACTCCCGCTCGCGGGGGTTGCTGCG GCGCCAGGGGCCGCTGCCGGACCACGAGCGTTTCTTCGATTTCCTGGGGGACCTGGAGATGGCCGGCTCCAGCGGAGACG CCAGCCACTGCACCTACTACTACCGCCAGCTGAGGGAGGAGAGCGGCGGGGTGGTCTACTGCGGCGGGACCCTGGGCGCC TTCCTGGCCGAGCAGTACGACCGGCTCTGCCTCCCCCGTCAGATACGGGAAACGGGCGGCAGCCTCAACCGTTTGCGCGA CGCCTCGGTGCTGGCGGTGGAACTGGACTGCCCCCGCTCCCTGGCTATCATTCGCCCCCTCTGCGCCGGCCGGGACATGG CCGACAACCTGTCCGCCCATCTGCAGCTCCTGGGTGAGGAGGGGATCGGCAACTTCATCGTCGAAATAAACAGCGGACGC AGCGAGGACACCGCCTTCGCCGATGCCCTGGAGCAGACCGGCTTTGTGCCGCGCCTGCTGGTGCCGGACGCGGGCCAGGG CGACCTGGTGGTGTACGACCATTCCGGCGGGAACGGGCAGCCATGA
Upstream 100 bases:
>100_bases AAGGTCCACTCCAGCCGTGGCCGCAGCCTGCTGGAGCTGGTCAGGCGGGACCATGGGCGGAAGGAACTATGAGGCGCCTG AACATTTGAGAGGCTCATCC
Downstream 100 bases:
>100_bases ACCTGGACACCCTGGTCCCCGACTATGTTCGCTGTTTCCAGGCCTACGTCCCCAGCAGGCCCGACCACCTGCTGATGCGT GAGTACGGCGCCCCCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MQQQTSRQKSATIRIPFSAPFLPLAMEFAERGAHGFGYGDREATGLVLAVEELFSFYSRRAAADSTAEIELEDQGYRLCL TLSFATANPDMRAFNLTWRVSHDSEESLDMLGPMIAARSVSSLRLDFGGNERVAIRMTRDRDYPAVGAAELPPADLIGTV RLSSPTADDLRHFAAMVTASASPFTPLFLARPGMAADMLAAGHLNALLAMSNDWIVGGVLWRPLTETCTELFGPYLFTCD PEDRTLTMLMDEAFGRISHSRSRGLLRRQGPLPDHERFFDFLGDLEMAGSSGDASHCTYYYRQLREESGGVVYCGGTLGA FLAEQYDRLCLPRQIRETGGSLNRLRDASVLAVELDCPRSLAIIRPLCAGRDMADNLSAHLQLLGEEGIGNFIVEINSGR SEDTAFADALEQTGFVPRLLVPDAGQGDLVVYDHSGGNGQP
Sequences:
>Translated_441_residues MQQQTSRQKSATIRIPFSAPFLPLAMEFAERGAHGFGYGDREATGLVLAVEELFSFYSRRAAADSTAEIELEDQGYRLCL TLSFATANPDMRAFNLTWRVSHDSEESLDMLGPMIAARSVSSLRLDFGGNERVAIRMTRDRDYPAVGAAELPPADLIGTV RLSSPTADDLRHFAAMVTASASPFTPLFLARPGMAADMLAAGHLNALLAMSNDWIVGGVLWRPLTETCTELFGPYLFTCD PEDRTLTMLMDEAFGRISHSRSRGLLRRQGPLPDHERFFDFLGDLEMAGSSGDASHCTYYYRQLREESGGVVYCGGTLGA FLAEQYDRLCLPRQIRETGGSLNRLRDASVLAVELDCPRSLAIIRPLCAGRDMADNLSAHLQLLGEEGIGNFIVEINSGR SEDTAFADALEQTGFVPRLLVPDAGQGDLVVYDHSGGNGQP >Mature_441_residues MQQQTSRQKSATIRIPFSAPFLPLAMEFAERGAHGFGYGDREATGLVLAVEELFSFYSRRAAADSTAEIELEDQGYRLCL TLSFATANPDMRAFNLTWRVSHDSEESLDMLGPMIAARSVSSLRLDFGGNERVAIRMTRDRDYPAVGAAELPPADLIGTV RLSSPTADDLRHFAAMVTASASPFTPLFLARPGMAADMLAAGHLNALLAMSNDWIVGGVLWRPLTETCTELFGPYLFTCD PEDRTLTMLMDEAFGRISHSRSRGLLRRQGPLPDHERFFDFLGDLEMAGSSGDASHCTYYYRQLREESGGVVYCGGTLGA FLAEQYDRLCLPRQIRETGGSLNRLRDASVLAVELDCPRSLAIIRPLCAGRDMADNLSAHLQLLGEEGIGNFIVEINSGR SEDTAFADALEQTGFVPRLLVPDAGQGDLVVYDHSGGNGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48177; Mature: 48177
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQQTSRQKSATIRIPFSAPFLPLAMEFAERGAHGFGYGDREATGLVLAVEELFSFYSRR CCCHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH AAADSTAEIELEDQGYRLCLTLSFATANPDMRAFNLTWRVSHDSEESLDMLGPMIAARSV HCCCCCEEEEECCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCC SSLRLDFGGNERVAIRMTRDRDYPAVGAAELPPADLIGTVRLSSPTADDLRHFAAMVTAS CCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHCEEEEEECCCCHHHHHHHHHHHHCC ASPFTPLFLARPGMAADMLAAGHLNALLAMSNDWIVGGVLWRPLTETCTELFGPYLFTCD CCCCCEEEEECCCCHHHHHHHHHHHEEEEECCCEEEEHHHHCCHHHHHHHHCCCEEEEEC PEDRTLTMLMDEAFGRISHSRSRGLLRRQGPLPDHERFFDFLGDLEMAGSSGDASHCTYY CCCCEEEHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHH YRQLREESGGVVYCGGTLGAFLAEQYDRLCLPRQIRETGGSLNRLRDASVLAVELDCPRS HHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCEEEEEEECCCCC LAIIRPLCAGRDMADNLSAHLQLLGEEGIGNFIVEINSGRSEDTAFADALEQTGFVPRLL HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEE VPDAGQGDLVVYDHSGGNGQP CCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MQQQTSRQKSATIRIPFSAPFLPLAMEFAERGAHGFGYGDREATGLVLAVEELFSFYSRR CCCHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH AAADSTAEIELEDQGYRLCLTLSFATANPDMRAFNLTWRVSHDSEESLDMLGPMIAARSV HCCCCCEEEEECCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCC SSLRLDFGGNERVAIRMTRDRDYPAVGAAELPPADLIGTVRLSSPTADDLRHFAAMVTAS CCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHCEEEEEECCCCHHHHHHHHHHHHCC ASPFTPLFLARPGMAADMLAAGHLNALLAMSNDWIVGGVLWRPLTETCTELFGPYLFTCD CCCCCEEEEECCCCHHHHHHHHHHHEEEEECCCEEEEHHHHCCHHHHHHHHCCCEEEEEC PEDRTLTMLMDEAFGRISHSRSRGLLRRQGPLPDHERFFDFLGDLEMAGSSGDASHCTYY CCCCEEEHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHH YRQLREESGGVVYCGGTLGAFLAEQYDRLCLPRQIRETGGSLNRLRDASVLAVELDCPRS HHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCEEEEEEECCCCC LAIIRPLCAGRDMADNLSAHLQLLGEEGIGNFIVEINSGRSEDTAFADALEQTGFVPRLL HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEE VPDAGQGDLVVYDHSGGNGQP CCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA