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The map label for this gene is tolR [H]

Identifier: 118579667

GI number: 118579667

Start: 1296778

End: 1297191

Strand: Reverse

Name: tolR [H]

Synonym: Ppro_1238

Alternate gene names: 118579667

Gene position: 1297191-1296778 (Counterclockwise)

Preceding gene: 118579668

Following gene: 118579666

Centisome position: 32.37

GC content: 62.32

Gene sequence:

>414_bases
ATGGCCATGGGAGGACAGGGAAACAACCGCGCGGCCATGGCCGATATCAACGTCACGCCGCTGGTGGACGTCATGCTGGT
GCTCCTGGTGATCTTCATGGTTACCGCTCCCATGATGCAGCAGGGGGTGCAGGTCAACCTGCCCAAGGCGGACACCAAGG
CCATGACCCAGGCCGAGGAGACGGTGATCGTCACGGTGGATGGAAAGGGCAGGATTTTCATCAACAAGGACGAAGTGCCT
GCCGGGGACCTGCGTTCCCGTCTCTCGGAGATGTTCGCCAACCGTGAGAAGAAGGAGATCTTCCTCAAGGCCGATGCCGG
CGTCCCCTACGGCGAGGTGGTCAGGGCCATGGCCGACATCAAGGGTGCCGGCATCGAGCGCCTGGGCATGGTGACGGAAC
CGGCGAAGCCGTAA

Upstream 100 bases:

>100_bases
ACCATTTTCAGCACAAGATCCGCGTCCTGACCAACGACATGGACAGCTTCTCCACTGAGTTCCTCAACATCGTGCAGCGC
ACCGTGGCGGGGAGATAGCC

Downstream 100 bases:

>100_bases
CGCGGGACAGCACGATTCAATTTTAGTGAGGGAGGATGCATGCAGCAGGAAAATTTCATACGCGCGATTGCCTGCGGTGT
GGCGCTGGCGGTTGCGCCGT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAMGGQGNNRAAMADINVTPLVDVMLVLLVIFMVTAPMMQQGVQVNLPKADTKAMTQAEETVIVTVDGKGRIFINKDEVP
AGDLRSRLSEMFANREKKEIFLKADAGVPYGEVVRAMADIKGAGIERLGMVTEPAKP

Sequences:

>Translated_137_residues
MAMGGQGNNRAAMADINVTPLVDVMLVLLVIFMVTAPMMQQGVQVNLPKADTKAMTQAEETVIVTVDGKGRIFINKDEVP
AGDLRSRLSEMFANREKKEIFLKADAGVPYGEVVRAMADIKGAGIERLGMVTEPAKP
>Mature_136_residues
AMGGQGNNRAAMADINVTPLVDVMLVLLVIFMVTAPMMQQGVQVNLPKADTKAMTQAEETVIVTVDGKGRIFINKDEVPA
GDLRSRLSEMFANREKKEIFLKADAGVPYGEVVRAMADIKGAGIERLGMVTEPAKP

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=133, Percent_Identity=34.5864661654135, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 14762; Mature: 14630

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMGGQGNNRAAMADINVTPLVDVMLVLLVIFMVTAPMMQQGVQVNLPKADTKAMTQAEE
CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCC
TVIVTVDGKGRIFINKDEVPAGDLRSRLSEMFANREKKEIFLKADAGVPYGEVVRAMADI
EEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
KGAGIERLGMVTEPAKP
CCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
AMGGQGNNRAAMADINVTPLVDVMLVLLVIFMVTAPMMQQGVQVNLPKADTKAMTQAEE
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCC
TVIVTVDGKGRIFINKDEVPAGDLRSRLSEMFANREKKEIFLKADAGVPYGEVVRAMADI
EEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
KGAGIERLGMVTEPAKP
CCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]