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The map label for this gene is 118579665

Identifier: 118579665

GI number: 118579665

Start: 1293749

End: 1294558

Strand: Reverse

Name: 118579665

Synonym: Ppro_1236

Alternate gene names: NA

Gene position: 1294558-1293749 (Counterclockwise)

Preceding gene: 118579666

Following gene: 118579664

Centisome position: 32.3

GC content: 69.14

Gene sequence:

>810_bases
ATGTTACGGCGAAGTGACGTTACAGTACTGATCCGGCCAGACCAGTCCTGGCCGGTCTGGTCATCGCTCGTGCTGCACGG
GGCGCTGTTCGCCTTCTGCTGCACCCTTCCCTACACACCAAAGGTGCATGACTGCATCATGGTGGACTTGCGGATGCCCA
GCTTCGCCACCCTCGCCCCCATGGGGGGGCGTCCGGCCCCCGGCCCGAAGAGCGCGGCGACGCGGAAAGCGGCTGCTCCG
GGCCCGGCGGCGCACCAGGAACCGTCCCCCCTGGCAACGCCCCTTCCACGGCCCCAGGCCATAGCCACGCCCATACAGAA
ACAAGCCGCCGCGCAGCCACCTCTCCCCTCCCCGGTGAACCAGGGAACGGCAACGGAAGGGACTGCCAGGGGACAGCAGA
CCGGCGCCGCAACATCCCACGGGGGAGGCGACGCTGGCGGCACGGCCCAGGGGGGCGGCGGCTCATCCAGCGGCAACTCC
GGTTCCGGTTCCGGCGGATCGGGCGGTTCGGGCAAACCCTTCGAGGGGGAATTCGGCGCCCAGGGAGGGCCGACATACCT
GAGCCGTGTGCTGCCGGTCTATCCCCGTTTCGCCCGCCGGCTCGGCAAGGAGGGAACGGTTCTGCTGCGCCTGACCCTGG
ACGAGAGCGGAGCCCTCAAAGGGGTGGAACTGCTGGAAAAGGCGGGGCACGGCTTTGACGAAGCCGCGCTGACAGCGGTA
AAGGCATCCCGCTTCAGGCCGGCCCTGCGCCACGGCAGACCGGTCCCCTGCCGGGCGCTTTTGCCGGTCAGGTTCGAACT
GCGGGACTGA

Upstream 100 bases:

>100_bases
AACTGCGCTACAAACTGACGTCCTGGGCAACGGCATCCTTTTCGGTCAACAACATCTTCGATGAGAAATACTTCTCATCC
ACAAAATCTCCGGGGCGATC

Downstream 100 bases:

>100_bases
TGTAACGGGGGATGCGGCGGTCGGCACATATCTGTACGCAGGGAATACCCCATTCCTCTCCCGTCCGGGGGTGGGAGGGG
AATCTTTTTACAGCGAATCC

Product: TonB family protein

Products: NA

Alternate protein names: NB Protein; NB Domain Protein; NB Domain-Containing Protein

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MLRRSDVTVLIRPDQSWPVWSSLVLHGALFAFCCTLPYTPKVHDCIMVDLRMPSFATLAPMGGRPAPGPKSAATRKAAAP
GPAAHQEPSPLATPLPRPQAIATPIQKQAAAQPPLPSPVNQGTATEGTARGQQTGAATSHGGGDAGGTAQGGGGSSSGNS
GSGSGGSGGSGKPFEGEFGAQGGPTYLSRVLPVYPRFARRLGKEGTVLLRLTLDESGALKGVELLEKAGHGFDEAALTAV
KASRFRPALRHGRPVPCRALLPVRFELRD

Sequences:

>Translated_269_residues
MLRRSDVTVLIRPDQSWPVWSSLVLHGALFAFCCTLPYTPKVHDCIMVDLRMPSFATLAPMGGRPAPGPKSAATRKAAAP
GPAAHQEPSPLATPLPRPQAIATPIQKQAAAQPPLPSPVNQGTATEGTARGQQTGAATSHGGGDAGGTAQGGGGSSSGNS
GSGSGGSGGSGKPFEGEFGAQGGPTYLSRVLPVYPRFARRLGKEGTVLLRLTLDESGALKGVELLEKAGHGFDEAALTAV
KASRFRPALRHGRPVPCRALLPVRFELRD
>Mature_269_residues
MLRRSDVTVLIRPDQSWPVWSSLVLHGALFAFCCTLPYTPKVHDCIMVDLRMPSFATLAPMGGRPAPGPKSAATRKAAAP
GPAAHQEPSPLATPLPRPQAIATPIQKQAAAQPPLPSPVNQGTATEGTARGQQTGAATSHGGGDAGGTAQGGGGSSSGNS
GSGSGGSGGSGKPFEGEFGAQGGPTYLSRVLPVYPRFARRLGKEGTVLLRLTLDESGALKGVELLEKAGHGFDEAALTAV
KASRFRPALRHGRPVPCRALLPVRFELRD

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27679; Mature: 27679

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRSDVTVLIRPDQSWPVWSSLVLHGALFAFCCTLPYTPKVHDCIMVDLRMPSFATLAP
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEECC
MGGRPAPGPKSAATRKAAAPGPAAHQEPSPLATPLPRPQAIATPIQKQAAAQPPLPSPVN
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
QGTATEGTARGQQTGAATSHGGGDAGGTAQGGGGSSSGNSGSGSGGSGGSGKPFEGEFGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QGGPTYLSRVLPVYPRFARRLGKEGTVLLRLTLDESGALKGVELLEKAGHGFDEAALTAV
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHH
KASRFRPALRHGRPVPCRALLPVRFELRD
HHHHHHHHHHCCCCCCEEEECCEEEEECC
>Mature Secondary Structure
MLRRSDVTVLIRPDQSWPVWSSLVLHGALFAFCCTLPYTPKVHDCIMVDLRMPSFATLAP
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEECC
MGGRPAPGPKSAATRKAAAPGPAAHQEPSPLATPLPRPQAIATPIQKQAAAQPPLPSPVN
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
QGTATEGTARGQQTGAATSHGGGDAGGTAQGGGGSSSGNSGSGSGGSGGSGKPFEGEFGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QGGPTYLSRVLPVYPRFARRLGKEGTVLLRLTLDESGALKGVELLEKAGHGFDEAALTAV
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHH
KASRFRPALRHGRPVPCRALLPVRFELRD
HHHHHHHHHHCCCCCCEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA