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The map label for this gene is yciH [C]

Identifier: 118579615

GI number: 118579615

Start: 1237466

End: 1237810

Strand: Reverse

Name: yciH [C]

Synonym: Ppro_1185

Alternate gene names: 118579615

Gene position: 1237810-1237466 (Counterclockwise)

Preceding gene: 118579616

Following gene: 118579614

Centisome position: 30.88

GC content: 63.48

Gene sequence:

>345_bases
GTGAAGAACAGCGACAACACCACCCTGGTCTATTCCAGCGAAACCGGCAGGATACGACCAGACAAGCGCGGCGCGGCATC
CCGCACGCCAGCCGCGCAACCGTCCGACGATCAGGTGCGCCTGCGCCGGGAAGTCAAAGGGCGCGGCGGGGGAACGGTCA
TAGTCATCACCGGCATTCCCCTGGAAGGCACGGCACTCAAGGAGCTGGCCGGCGCGCTAAAAAAGCGCTGCGGATGCGGC
GGTACAATCAAGAATGGAGCACTGGAAATCCAGGGAGATCACCGCGAGCTGCTGGTGCAGGAACTTCAGAACCGGGGGTT
TCGGGTCAAGCTGGCCGGAGGCTGA

Upstream 100 bases:

>100_bases
CACGACAGACACTTACCCCTCCATCGACGACGCCCGCCCTCACGGGAACGAAACGCCGTAACGACGGGGGAATTCCCATG
ACTCACGAGCTGGGGGAACA

Downstream 100 bases:

>100_bases
GCAAGCCTTTCCCCTGCAAAAATAGTTCTTGACCGCGGGAGTGTTTTGCAATATGAATCACTATTCAACTTATTTTTCAG
GGTATCGCCACAAAAAACGG

Product: translation initiation factor SUI1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKNSDNTTLVYSSETGRIRPDKRGAASRTPAAQPSDDQVRLRREVKGRGGGTVIVITGIPLEGTALKELAGALKKRCGCG
GTIKNGALEIQGDHRELLVQELQNRGFRVKLAGG

Sequences:

>Translated_114_residues
MKNSDNTTLVYSSETGRIRPDKRGAASRTPAAQPSDDQVRLRREVKGRGGGTVIVITGIPLEGTALKELAGALKKRCGCG
GTIKNGALEIQGDHRELLVQELQNRGFRVKLAGG
>Mature_114_residues
MKNSDNTTLVYSSETGRIRPDKRGAASRTPAAQPSDDQVRLRREVKGRGGGTVIVITGIPLEGTALKELAGALKKRCGCG
GTIKNGALEIQGDHRELLVQELQNRGFRVKLAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=112, Percent_Identity=49.1071428571429, Blast_Score=99, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12139; Mature: 12139

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSDNTTLVYSSETGRIRPDKRGAASRTPAAQPSDDQVRLRREVKGRGGGTVIVITGIP
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCC
LEGTALKELAGALKKRCGCGGTIKNGALEIQGDHRELLVQELQNRGFRVKLAGG
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MKNSDNTTLVYSSETGRIRPDKRGAASRTPAAQPSDDQVRLRREVKGRGGGTVIVITGIP
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCC
LEGTALKELAGALKKRCGCGGTIKNGALEIQGDHRELLVQELQNRGFRVKLAGG
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]