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The map label for this gene is citD [H]

Identifier: 118579520

GI number: 118579520

Start: 1137255

End: 1137518

Strand: Reverse

Name: citD [H]

Synonym: Ppro_1087

Alternate gene names: 118579520

Gene position: 1137518-1137255 (Counterclockwise)

Preceding gene: 118579521

Following gene: 118579519

Centisome position: 28.38

GC content: 63.26

Gene sequence:

>264_bases
ATGACAATCACGAAAAAGGGACAGGCCGGCACCATGCAATCCAGCGACCTGATGGTGTTCGTTGAACCGGCGGACGAGCT
GACCGTGGAGATCGAATCCACGGTCAAGAAGCAGTTCGAGCACCTGATCCGCGCCAAGCTGGGACAGGTGCTGGCCAAGC
AGGGGGTCACCAGGGGCAGAATCCGCATCAGCGACCGGGGCGCACTGGACTACGCCATCGAGGCGCGCCTGGAAGCGGCG
CTGCAACGGGCCAGGGAGGTGTGA

Upstream 100 bases:

>100_bases
CGCTGGAACTGCTGGTGCCGGACAGCACGTCAGCTTTTCTGATGAGCAGCGAAGCCGATCCCATTCGAGACAAACTACGC
CATGACAGGGGAGTCTTCAG

Downstream 100 bases:

>100_bases
AGGGATGAGTGGCTTCAGATACAAGGAATACAAACAGGGGCGGCGCTTCATCCTCAAGATCATTCCGGGCGAGAGCCTGG
TGGAGTGCATCACCCAGTTC

Product: citrate lyase subunit gamma

Products: acetate; oxaloacetate

Alternate protein names: Citrate lyase gamma chain [H]

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTITKKGQAGTMQSSDLMVFVEPADELTVEIESTVKKQFEHLIRAKLGQVLAKQGVTRGRIRISDRGALDYAIEARLEAA
LQRAREV

Sequences:

>Translated_87_residues
MTITKKGQAGTMQSSDLMVFVEPADELTVEIESTVKKQFEHLIRAKLGQVLAKQGVTRGRIRISDRGALDYAIEARLEAA
LQRAREV
>Mature_86_residues
TITKKGQAGTMQSSDLMVFVEPADELTVEIESTVKKQFEHLIRAKLGQVLAKQGVTRGRIRISDRGALDYAIEARLEAAL
QRAREV

Specific function: Covalent carrier of the coenzyme of citrate lyase [H]

COG id: COG3052

COG function: function code C; Citrate lyase, gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitD family [H]

Homologues:

Organism=Escherichia coli, GI1786834, Length=86, Percent_Identity=40.6976744186046, Blast_Score=66, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006495
- InterPro:   IPR009662
- ProDom:   PD015389 [H]

Pfam domain/function: PF06857 MdcD [H]

EC number: 4.1.3.6

Molecular weight: Translated: 9670; Mature: 9539

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITKKGQAGTMQSSDLMVFVEPADELTVEIESTVKKQFEHLIRAKLGQVLAKQGVTRGR
CCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
IRISDRGALDYAIEARLEAALQRAREV
EEECCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TITKKGQAGTMQSSDLMVFVEPADELTVEIESTVKKQFEHLIRAKLGQVLAKQGVTRGR
CCCCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
IRISDRGALDYAIEARLEAALQRAREV
EEECCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: citrate

Specific reaction: citrate = acetate + oxaloacetate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA