Click here to switch to the map view.

The map label for this gene is citC [H]

Identifier: 118579521

GI number: 118579521

Start: 1137515

End: 1138531

Strand: Reverse

Name: citC [H]

Synonym: Ppro_1088

Alternate gene names: 118579521

Gene position: 1138531-1137515 (Counterclockwise)

Preceding gene: 118579522

Following gene: 118579520

Centisome position: 28.41

GC content: 62.93

Gene sequence:

>1017_bases
ATGATTACGGAACTGCACTCTCCCCCTGACATACGGGCGGCGCACGGGCTCGTGGAGCAAAGCGGACTCTCCTTCGAAGA
GGGATTCGACGAGCTGCTGGGCATCCACGAACAAGGCAAACTCGTGGCAGTAGGCGCGCGGGTCGACAACATCCTTAAAA
TGTTCGCCGTTGAGCCGTCCCACCAGGGGCAGGAACTCCTGGCCAGGATGGTCACCGAGCTGGTCAGGCGCGGATTCGCC
GCCGGCTTCGAATCCCTGTTCGTCTTCACCAAGCCGGAGCACGTTACCACCTTCCAGTCGCTCAACTTCTCGCTTCTGGC
CAGCCAGGAGCAAGTGGCGCTCCTGGAATACGGCAGGGGGCTTGAGCGCTGGCTCGCATCCCAGCGCTCTCTGATCAGGA
ACGGAACCAACGGCGCGGTGGTAATGAACTGCAACCCCTTCACCCGCGGCCACCGGCACCTGGTGGAAAGCGCGGCCCGG
CAGGTGGACACCCTCTACCTGTTCGTGGTGGCCGAGGATCGCTCGGCATTCCCCTTTCAGGTCCGCCTCCAGCTGGTGCG
CCAGGGGGTGGGGGACCTGGCCAACGTCCTGGTTCTGGGCACCTCCCACTACGCCATCAGCGGCGCCACCTTTCCCACCT
ACTTCCTGAAGAGAGACGACCCGGTGGCCCGCATCCAGATGGAACTGGACCTGACCCTGTTCGCCTCCCGCATCGCCCCC
TTTTTTCGCATCACCCGTAGATTCGTGGGCAACGAGCCCTGCTGCGGCCTGACCTTCCGCTACAATGAATGCATGAAGAG
CCTGCTCCCCCCCCATGGCATAACCCTCACCGAGGTGGAGCGCATCTGCGCGGGCGGAGAGGTCATCAGCGCCTCGCGGG
TGCGGCAGGCGCTGGCAAACAATGACCGTGCGACGCTGGAACTGCTGGTGCCGGACAGCACGTCAGCTTTTCTGATGAGC
AGCGAAGCCGATCCCATTCGAGACAAACTACGCCATGACAGGGGAGTCTTCAGATGA

Upstream 100 bases:

>100_bases
GCCTGATCGTCCGCCGGGATAAAGAACTGTTGACAGACGGCTTGCAAAGCCGTCAAATGCACCAGCGGATCATGTCAATT
TCAGAGGATGAATCGGGCAC

Downstream 100 bases:

>100_bases
CAATCACGAAAAAGGGACAGGCCGGCACCATGCAATCCAGCGACCTGATGGTGTTCGTTGAACCGGCGGACGAGCTGACC
GTGGAGATCGAATCCACGGT

Product: citrate lyase ligase

Products: NA

Alternate protein names: Acetate:SH-citrate lyase ligase; Citrate lyase synthetase [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MITELHSPPDIRAAHGLVEQSGLSFEEGFDELLGIHEQGKLVAVGARVDNILKMFAVEPSHQGQELLARMVTELVRRGFA
AGFESLFVFTKPEHVTTFQSLNFSLLASQEQVALLEYGRGLERWLASQRSLIRNGTNGAVVMNCNPFTRGHRHLVESAAR
QVDTLYLFVVAEDRSAFPFQVRLQLVRQGVGDLANVLVLGTSHYAISGATFPTYFLKRDDPVARIQMELDLTLFASRIAP
FFRITRRFVGNEPCCGLTFRYNECMKSLLPPHGITLTEVERICAGGEVISASRVRQALANNDRATLELLVPDSTSAFLMS
SEADPIRDKLRHDRGVFR

Sequences:

>Translated_338_residues
MITELHSPPDIRAAHGLVEQSGLSFEEGFDELLGIHEQGKLVAVGARVDNILKMFAVEPSHQGQELLARMVTELVRRGFA
AGFESLFVFTKPEHVTTFQSLNFSLLASQEQVALLEYGRGLERWLASQRSLIRNGTNGAVVMNCNPFTRGHRHLVESAAR
QVDTLYLFVVAEDRSAFPFQVRLQLVRQGVGDLANVLVLGTSHYAISGATFPTYFLKRDDPVARIQMELDLTLFASRIAP
FFRITRRFVGNEPCCGLTFRYNECMKSLLPPHGITLTEVERICAGGEVISASRVRQALANNDRATLELLVPDSTSAFLMS
SEADPIRDKLRHDRGVFR
>Mature_338_residues
MITELHSPPDIRAAHGLVEQSGLSFEEGFDELLGIHEQGKLVAVGARVDNILKMFAVEPSHQGQELLARMVTELVRRGFA
AGFESLFVFTKPEHVTTFQSLNFSLLASQEQVALLEYGRGLERWLASQRSLIRNGTNGAVVMNCNPFTRGHRHLVESAAR
QVDTLYLFVVAEDRSAFPFQVRLQLVRQGVGDLANVLVLGTSHYAISGATFPTYFLKRDDPVARIQMELDLTLFASRIAP
FFRITRRFVGNEPCCGLTFRYNECMKSLLPPHGITLTEVERICAGGEVISASRVRQALANNDRATLELLVPDSTSAFLMS
SEADPIRDKLRHDRGVFR

Specific function: Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase [H]

COG id: COG3053

COG function: function code C; Citrate lyase synthetase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI87081765, Length=314, Percent_Identity=37.5796178343949, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR005216
- InterPro:   IPR013166
- InterPro:   IPR004821
- InterPro:   IPR014729 [H]

Pfam domain/function: PF08218 Citrate_ly_lig [H]

EC number: =6.2.1.22 [H]

Molecular weight: Translated: 37690; Mature: 37690

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITELHSPPDIRAAHGLVEQSGLSFEEGFDELLGIHEQGKLVAVGARVDNILKMFAVEPS
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCC
HQGQELLARMVTELVRRGFAAGFESLFVFTKPEHVTTFQSLNFSLLASQEQVALLEYGRG
CCHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHCCEEEECCCHHHHHHHHCCC
LERWLASQRSLIRNGTNGAVVMNCNPFTRGHRHLVESAARQVDTLYLFVVAEDRSAFPFQ
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHH
VRLQLVRQGVGDLANVLVLGTSHYAISGATFPTYFLKRDDPVARIQMELDLTLFASRIAP
HHHHHHHHHHHHHHHHHEECCCCEEEECCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHH
FFRITRRFVGNEPCCGLTFRYNECMKSLLPPHGITLTEVERICAGGEVISASRVRQALAN
HHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHC
NDRATLELLVPDSTSAFLMSSEADPIRDKLRHDRGVFR
CCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MITELHSPPDIRAAHGLVEQSGLSFEEGFDELLGIHEQGKLVAVGARVDNILKMFAVEPS
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCC
HQGQELLARMVTELVRRGFAAGFESLFVFTKPEHVTTFQSLNFSLLASQEQVALLEYGRG
CCHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHCCEEEECCCHHHHHHHHCCC
LERWLASQRSLIRNGTNGAVVMNCNPFTRGHRHLVESAARQVDTLYLFVVAEDRSAFPFQ
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHH
VRLQLVRQGVGDLANVLVLGTSHYAISGATFPTYFLKRDDPVARIQMELDLTLFASRIAP
HHHHHHHHHHHHHHHHHEECCCCEEEECCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHH
FFRITRRFVGNEPCCGLTFRYNECMKSLLPPHGITLTEVERICAGGEVISASRVRQALAN
HHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHC
NDRATLELLVPDSTSAFLMSSEADPIRDKLRHDRGVFR
CCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]