| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579175
Identifier: 118579175
GI number: 118579175
Start: 775041
End: 775925
Strand: Reverse
Name: 118579175
Synonym: Ppro_0736
Alternate gene names: NA
Gene position: 775925-775041 (Counterclockwise)
Preceding gene: 118579176
Following gene: 118579174
Centisome position: 19.36
GC content: 66.67
Gene sequence:
>885_bases ATGAAATCGCTCAGGGTGGGCCTGATCCAGCAGAGCTGTTCCGCCGACCGCGCCGCGAACCTGGAGAAGAGCTGCGACAT GATCGCCCGAGCTGCCGCCTCCGGAGCGGAGCTTGTCGTGCTGCAGGAACTGCACACCGGCCCCTACTTCTGCCAGACCG AGGATCCCTCCCTGTTCGATCTGGCCGAGCCGATCCCCGGCCCCACCTGCGAAACACTGGGCCCACTGGCCGCCAGGTTG GGGGTGGTGATCGTGGCGTCGCTCTTCGAGCGGCGCGCCCCCGGCCTGTACCACAACAGCGCCGTCGTATTCGAGAGGGA CGGCTCCATGGCGGGAATGTACCGCAAGATGCACATCCCCGACGATCCCGGTTTCTATGAAAAATTCTACTTCACGCCGG GCGACCTGGGCTTCGCTCCCATCCAGACCTCGCTGGGCAAACTGGGCGTACTGGTCTGCTGGGATCAGTGGTACCCGGAA GCCGCCCGCCTGATGGCACTGGCCGGCGCCGACCTGCTGATCTACCCCACCGCCATCGGTTGGGACCCGGCGGACAGCGC CGAGGAGCAGGCGCGCCAGCGGGATGCCTGGGTCACGGTCCAGCGCGGGCATACGGTGGCCAACGGCCTGCCGCTCTTGG CGGTCAACCGGGTTGGCTTGGAGGCATCCACGGAGAAACCGGAAAACGGTATCCTCTTCTGGGGGACCAGCTTCGCCGCC GGCCCCCAGGGGGAGATCCTGACCCAGGCAAGCCAGGACAGGGAGGAGGTCGTGCTGGTGGAACTGGATCTGGGGCGCAG CGAAACGGTGCGCCGCATCTGGCCCTTCCTGCGCGACCGGCGCATCGACGCCTATGGGGAGATCCTGAAGCGCTACCGTG ACTGA
Upstream 100 bases:
>100_bases TTCCCGGGCGCGAGATCATCGCCATCGACTGCCTGCCGCTGCTGAAGCAGCACGGTTCGCTGCACTGCGTCACCATGCAA CTCCCCCAGGGGGTGCTGGC
Downstream 100 bases:
>100_bases CAGCGGGGGCGGCATCGTCGACACAGCCCGGTGGTTGACAGATAAAGTTTCTTTATGATATTTTTTTCAGTTCAAAATTT TCGTGACAGCATCACCAGCC
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKSLRVGLIQQSCSADRAANLEKSCDMIARAAASGAELVVLQELHTGPYFCQTEDPSLFDLAEPIPGPTCETLGPLAARL GVVIVASLFERRAPGLYHNSAVVFERDGSMAGMYRKMHIPDDPGFYEKFYFTPGDLGFAPIQTSLGKLGVLVCWDQWYPE AARLMALAGADLLIYPTAIGWDPADSAEEQARQRDAWVTVQRGHTVANGLPLLAVNRVGLEASTEKPENGILFWGTSFAA GPQGEILTQASQDREEVVLVELDLGRSETVRRIWPFLRDRRIDAYGEILKRYRD
Sequences:
>Translated_294_residues MKSLRVGLIQQSCSADRAANLEKSCDMIARAAASGAELVVLQELHTGPYFCQTEDPSLFDLAEPIPGPTCETLGPLAARL GVVIVASLFERRAPGLYHNSAVVFERDGSMAGMYRKMHIPDDPGFYEKFYFTPGDLGFAPIQTSLGKLGVLVCWDQWYPE AARLMALAGADLLIYPTAIGWDPADSAEEQARQRDAWVTVQRGHTVANGLPLLAVNRVGLEASTEKPENGILFWGTSFAA GPQGEILTQASQDREEVVLVELDLGRSETVRRIWPFLRDRRIDAYGEILKRYRD >Mature_294_residues MKSLRVGLIQQSCSADRAANLEKSCDMIARAAASGAELVVLQELHTGPYFCQTEDPSLFDLAEPIPGPTCETLGPLAARL GVVIVASLFERRAPGLYHNSAVVFERDGSMAGMYRKMHIPDDPGFYEKFYFTPGDLGFAPIQTSLGKLGVLVCWDQWYPE AARLMALAGADLLIYPTAIGWDPADSAEEQARQRDAWVTVQRGHTVANGLPLLAVNRVGLEASTEKPENGILFWGTSFAA GPQGEILTQASQDREEVVLVELDLGRSETVRRIWPFLRDRRIDAYGEILKRYRD
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=296, Percent_Identity=27.3648648648649, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI7706509, Length=308, Percent_Identity=27.5974025974026, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI297632348, Length=295, Percent_Identity=25.4237288135593, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI297632350, Length=295, Percent_Identity=25.4237288135593, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI5031947, Length=295, Percent_Identity=25.4237288135593, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI297632346, Length=198, Percent_Identity=28.2828282828283, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17533173, Length=305, Percent_Identity=29.8360655737705, Blast_Score=124, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17556280, Length=288, Percent_Identity=24.3055555555556, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17557111, Length=277, Percent_Identity=27.4368231046931, Blast_Score=68, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323383, Length=297, Percent_Identity=27.2727272727273, Blast_Score=108, Evalue=1e-24, Organism=Drosophila melanogaster, GI21358471, Length=313, Percent_Identity=30.6709265175719, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI17933642, Length=290, Percent_Identity=23.7931034482759, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI21355835, Length=291, Percent_Identity=26.1168384879725, Blast_Score=85, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 32415; Mature: 32415
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLRVGLIQQSCSADRAANLEKSCDMIARAAASGAELVVLQELHTGPYFCQTEDPSLFD CCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCHHH LAEPIPGPTCETLGPLAARLGVVIVASLFERRAPGLYHNSAVVFERDGSMAGMYRKMHIP HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHEEEECCC DDPGFYEKFYFTPGDLGFAPIQTSLGKLGVLVCWDQWYPEAARLMALAGADLLIYPTAIG CCCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECC WDPADSAEEQARQRDAWVTVQRGHTVANGLPLLAVNRVGLEASTEKPENGILFWGTSFAA CCCCCHHHHHHHHHCCEEEEECCCCHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC GPQGEILTQASQDREEVVLVELDLGRSETVRRIWPFLRDRRIDAYGEILKRYRD CCCCCCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MKSLRVGLIQQSCSADRAANLEKSCDMIARAAASGAELVVLQELHTGPYFCQTEDPSLFD CCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCHHH LAEPIPGPTCETLGPLAARLGVVIVASLFERRAPGLYHNSAVVFERDGSMAGMYRKMHIP HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHEEEECCC DDPGFYEKFYFTPGDLGFAPIQTSLGKLGVLVCWDQWYPEAARLMALAGADLLIYPTAIG CCCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECC WDPADSAEEQARQRDAWVTVQRGHTVANGLPLLAVNRVGLEASTEKPENGILFWGTSFAA CCCCCHHHHHHHHHCCEEEEECCCCHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC GPQGEILTQASQDREEVVLVELDLGRSETVRRIWPFLRDRRIDAYGEILKRYRD CCCCCCHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]