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The map label for this gene is 118579053

Identifier: 118579053

GI number: 118579053

Start: 650350

End: 652062

Strand: Reverse

Name: 118579053

Synonym: Ppro_0614

Alternate gene names: NA

Gene position: 652062-650350 (Counterclockwise)

Preceding gene: 118579054

Following gene: 118579049

Centisome position: 16.27

GC content: 63.75

Gene sequence:

>1713_bases
ATGAAACTGCTGCTGACCACCCTGCACGCCAAATACTCCCACGCCTCCCTGGCGCTCCCCTGCCTGACCGCCGCCTGTGG
CGACCTGGCCGATCTGGGCATCAGCATCAGGGAGTGGACCGTCAACGAACCACGCCAGCAGCTCCTGCGCCGGATCATGG
CCGGACAGGCCGACGCGGTGGCCTTTTCCTGCTACATCTGGAACATCGAGAGCAGCCTCAAGCTTGCCGACGACATAAAG
AAGATCGCGCCCCACACCCGGATCATCCTGGGCGGGCCGGAAGCGTCCTTTGGCATCTTCCAGCTGATGCACGACAATCC
GGCCGTGGATTTCGTGGTCAGGGGAGAGGGGGAGGCGGTCTTCCGCAGCCTGATGGAAACGCTGCTCCGCCAGAGGGGCA
GCGACCCGTCCAGCGAGAAGGACCAGTTTCAGGGAATCGAAAATCTCTTCTACCGCTGGGGCAACGACATCCTCTCCGGC
CCCCTGGCCACGGGCTACCTGGAGATGGATAGCATCCCCTCCCCCTTCCAGGCCGGCCTGGTTGACCTGTCCAAACCGCT
GATCTACTACGAAACATCCCGGGGCTGCCCCTTCTCCTGCGCCTTCTGCCTCTCCTCCCTGGAGGGGCGGGTGCGCTCAT
TCTCCATGGAGCGCATCGAGAGCGACCTTGTCTGGCTCATGTCCCGGGAAATCCAGCAGATCAAGCTGGTGGATCGCACC
TTCAACTACGACGGGGAGCGGGCCAACCGCATCTGGGAACTGATCCTGGCCAACAACCGGACCAGCCGCTTCCACTTCGA
AATCGCCGCCGACCTGCTCACCGACCGGAACATGGAGATCTTGCGCCGCGTTCCGCCCCGAACCTTCGGCTTCGAGATCG
GCGTGCAGTCATTCCGGGCGGACAGCCTGGAGCAGGTGCAGCGCCGTAGCAACCTGGAACGGTTGGCAGCCAACGTGCGC
CGACTGCGCGCGGAAACGGTGGTGGAACTGCACCTGGACCTGCTTGCCGGCCTGCCGGGGGAAAGCTATGACGGGCTGCT
GGATTCCCTGGACCGACTGGCGGAGCTGAAACCCCATGTCATCCAGATCGAGCCGCTGAAACTGCTCAAGGGCTCGGCCA
TGCGCACGATCGCCAGGGACAACGGGTACCGCTTCTCCCAGTCGCCCCCCTACACCATCCTGACCACCCCCTGGCTCTCC
TTCGACGACATCGGCCGCATCGAAACCATCGGGCGCCTGCTGGACCTGTTTTACAACCGAGGGGGATTCGGGACGGCTCT
GGCCTTCATGCAACGGCACATTGGGTTCAGCCAGCTGTTCCACCTCATGGCCGGCCAGCCCGAGGGAGACGACCTGACCG
GCCGCACCATCCGTCGCACCTTTGAGCTGTTCGCCTCCCTGGCCGCCCCACTGCTGCCGGAGCAGGAACGGGAACTGCTG
TACGACACGCTCTTCTTCGACTACTGTCGGGTGGAGATGCCGCTGATGGGCAAACTCCCCTCCTTCGCGGCTGATCGGCA
GCAGCAGTGCTCGTGGCCCGGGCGGGCTGAGCTGCCGTCGGGAATCGAGCTGCCGACCCATGGCCGCGTACGAGCCTTCA
GGTCTTTTTTTCAGTGGGATTATCGAAACGAGGGATGGAAGGAGGAACCGACGGCGGTGACGTTCGTCTACGCCTCCGCC
GCCGGTCAGGGATTACAGGTCAGAGTGCTGTGA

Upstream 100 bases:

>100_bases
GATTCGTACCCGGTTTTTCCCGCCTTTTCAGACCTGATCCGCGTTCCATTGTCGTGGTCTTTTTCCCATCCAGCCCCGAC
CAAGGAACCACCTCCAACCC

Downstream 100 bases:

>100_bases
CTGGTGACTGCTCACTGTCCGCTATTCACTAGTTGGTCAGTGCCTGGATCGGCGCGGGTATCCTGCCGCCGCGCCCGATG
AAGGTTTCCGCGCTGAAGTT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MKLLLTTLHAKYSHASLALPCLTAACGDLADLGISIREWTVNEPRQQLLRRIMAGQADAVAFSCYIWNIESSLKLADDIK
KIAPHTRIILGGPEASFGIFQLMHDNPAVDFVVRGEGEAVFRSLMETLLRQRGSDPSSEKDQFQGIENLFYRWGNDILSG
PLATGYLEMDSIPSPFQAGLVDLSKPLIYYETSRGCPFSCAFCLSSLEGRVRSFSMERIESDLVWLMSREIQQIKLVDRT
FNYDGERANRIWELILANNRTSRFHFEIAADLLTDRNMEILRRVPPRTFGFEIGVQSFRADSLEQVQRRSNLERLAANVR
RLRAETVVELHLDLLAGLPGESYDGLLDSLDRLAELKPHVIQIEPLKLLKGSAMRTIARDNGYRFSQSPPYTILTTPWLS
FDDIGRIETIGRLLDLFYNRGGFGTALAFMQRHIGFSQLFHLMAGQPEGDDLTGRTIRRTFELFASLAAPLLPEQERELL
YDTLFFDYCRVEMPLMGKLPSFAADRQQQCSWPGRAELPSGIELPTHGRVRAFRSFFQWDYRNEGWKEEPTAVTFVYASA
AGQGLQVRVL

Sequences:

>Translated_570_residues
MKLLLTTLHAKYSHASLALPCLTAACGDLADLGISIREWTVNEPRQQLLRRIMAGQADAVAFSCYIWNIESSLKLADDIK
KIAPHTRIILGGPEASFGIFQLMHDNPAVDFVVRGEGEAVFRSLMETLLRQRGSDPSSEKDQFQGIENLFYRWGNDILSG
PLATGYLEMDSIPSPFQAGLVDLSKPLIYYETSRGCPFSCAFCLSSLEGRVRSFSMERIESDLVWLMSREIQQIKLVDRT
FNYDGERANRIWELILANNRTSRFHFEIAADLLTDRNMEILRRVPPRTFGFEIGVQSFRADSLEQVQRRSNLERLAANVR
RLRAETVVELHLDLLAGLPGESYDGLLDSLDRLAELKPHVIQIEPLKLLKGSAMRTIARDNGYRFSQSPPYTILTTPWLS
FDDIGRIETIGRLLDLFYNRGGFGTALAFMQRHIGFSQLFHLMAGQPEGDDLTGRTIRRTFELFASLAAPLLPEQERELL
YDTLFFDYCRVEMPLMGKLPSFAADRQQQCSWPGRAELPSGIELPTHGRVRAFRSFFQWDYRNEGWKEEPTAVTFVYASA
AGQGLQVRVL
>Mature_570_residues
MKLLLTTLHAKYSHASLALPCLTAACGDLADLGISIREWTVNEPRQQLLRRIMAGQADAVAFSCYIWNIESSLKLADDIK
KIAPHTRIILGGPEASFGIFQLMHDNPAVDFVVRGEGEAVFRSLMETLLRQRGSDPSSEKDQFQGIENLFYRWGNDILSG
PLATGYLEMDSIPSPFQAGLVDLSKPLIYYETSRGCPFSCAFCLSSLEGRVRSFSMERIESDLVWLMSREIQQIKLVDRT
FNYDGERANRIWELILANNRTSRFHFEIAADLLTDRNMEILRRVPPRTFGFEIGVQSFRADSLEQVQRRSNLERLAANVR
RLRAETVVELHLDLLAGLPGESYDGLLDSLDRLAELKPHVIQIEPLKLLKGSAMRTIARDNGYRFSQSPPYTILTTPWLS
FDDIGRIETIGRLLDLFYNRGGFGTALAFMQRHIGFSQLFHLMAGQPEGDDLTGRTIRRTFELFASLAAPLLPEQERELL
YDTLFFDYCRVEMPLMGKLPSFAADRQQQCSWPGRAELPSGIELPTHGRVRAFRSFFQWDYRNEGWKEEPTAVTFVYASA
AGQGLQVRVL

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 64682; Mature: 64682

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLLTTLHAKYSHASLALPCLTAACGDLADLGISIREWTVNEPRQQLLRRIMAGQADAV
CCEEEEEHHHHHCCCHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHHHCCCCCEE
AFSCYIWNIESSLKLADDIKKIAPHTRIILGGPEASFGIFQLMHDNPAVDFVVRGEGEAV
EEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHEEECCCCCEEEEEECCCHHH
FRSLMETLLRQRGSDPSSEKDQFQGIENLFYRWGNDILSGPLATGYLEMDSIPSPFQAGL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCEEECCCCCCHHHHHH
VDLSKPLIYYETSRGCPFSCAFCLSSLEGRVRSFSMERIESDLVWLMSREIQQIKLVDRT
HHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNYDGERANRIWELILANNRTSRFHFEIAADLLTDRNMEILRRVPPRTFGFEIGVQSFRA
CCCCCHHHHHHHHHHEECCCCCEEEHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHCH
DSLEQVQRRSNLERLAANVRRLRAETVVELHLDLLAGLPGESYDGLLDSLDRLAELKPHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCE
IQIEPLKLLKGSAMRTIARDNGYRFSQSPPYTILTTPWLSFDDIGRIETIGRLLDLFYNR
EEECHHHHHCCHHHHHHHHCCCEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
GGFGTALAFMQRHIGFSQLFHLMAGQPEGDDLTGRTIRRTFELFASLAAPLLPEQERELL
CCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
YDTLFFDYCRVEMPLMGKLPSFAADRQQQCSWPGRAELPSGIELPTHGRVRAFRSFFQWD
HHHHHHHHHHCCCCHHCCCCCHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
YRNEGWKEEPTAVTFVYASAAGQGLQVRVL
CCCCCCCCCCCEEEEEEECCCCCCCEEEEC
>Mature Secondary Structure
MKLLLTTLHAKYSHASLALPCLTAACGDLADLGISIREWTVNEPRQQLLRRIMAGQADAV
CCEEEEEHHHHHCCCHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHHHCCCCCEE
AFSCYIWNIESSLKLADDIKKIAPHTRIILGGPEASFGIFQLMHDNPAVDFVVRGEGEAV
EEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHEEECCCCCEEEEEECCCHHH
FRSLMETLLRQRGSDPSSEKDQFQGIENLFYRWGNDILSGPLATGYLEMDSIPSPFQAGL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCEEECCCCCCHHHHHH
VDLSKPLIYYETSRGCPFSCAFCLSSLEGRVRSFSMERIESDLVWLMSREIQQIKLVDRT
HHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNYDGERANRIWELILANNRTSRFHFEIAADLLTDRNMEILRRVPPRTFGFEIGVQSFRA
CCCCCHHHHHHHHHHEECCCCCEEEHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHCH
DSLEQVQRRSNLERLAANVRRLRAETVVELHLDLLAGLPGESYDGLLDSLDRLAELKPHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCE
IQIEPLKLLKGSAMRTIARDNGYRFSQSPPYTILTTPWLSFDDIGRIETIGRLLDLFYNR
EEECHHHHHCCHHHHHHHHCCCEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
GGFGTALAFMQRHIGFSQLFHLMAGQPEGDDLTGRTIRRTFELFASLAAPLLPEQERELL
CCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
YDTLFFDYCRVEMPLMGKLPSFAADRQQQCSWPGRAELPSGIELPTHGRVRAFRSFFQWD
HHHHHHHHHHCCCCHHCCCCCHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
YRNEGWKEEPTAVTFVYASAAGQGLQVRVL
CCCCCCCCCCCEEEEEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]