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The map label for this gene is smf [H]

Identifier: 118578968

GI number: 118578968

Start: 564765

End: 565880

Strand: Reverse

Name: smf [H]

Synonym: Ppro_0529

Alternate gene names: 118578968

Gene position: 565880-564765 (Counterclockwise)

Preceding gene: 118578969

Following gene: 118578967

Centisome position: 14.12

GC content: 67.38

Gene sequence:

>1116_bases
ATGCCGCAGCGCAATGACAGCAGTGAAGAGCTGTACTGGATCGGCCTTAAGAGTGTTGCCGGCGTCGGCAGCGTCACCTT
CCGACGCCTGCTGGAGCGTTTCGACACCCCCCGGGCCGCCCTGCATGCCGCGCCCGAGGAGTTGGCCAGGGTCAGGGGCA
TGACCGCGGCGGGCATCGCGGCCATCGCGGTCGGGGCCTGGCAGCGGCAGGCCGAGGAGGAGTGCCGCAGGCTGGAGAAA
AGCGGCGCGCGACTGGTCACCTTTACCTCCAGCGACTACCCCAAATCACTGTTCCAGATCAGCGACCCGCCACCGTTCCT
CTATGTGAAGGGAAAAATCCGCTCCCATGAGCCGGCCATCGCCATGGTCGGCTCGCGCCGGGCCACAAGGTACGGAGTAC
AGGCCACCGCCCGGCTGGCCGAGGAACTGGCCCGACACGGCGTGGCGGTCATCTCCGGCATGGCCCGCGGCGTGGACACG
GCCGCTCACCGGGGGGCCCTGGCGGGCGACGGCAGGACCATCGGCGTGCTGGGCTGCGGCATCGACAGGATCTACCCCCC
GGAAAACCGCGATCTGTTCGACGAGATGGCCGAGCGGGGATGCCTGGTGAGCGAGTTCCCCCTGGGCACCCTCCCCCTGG
GGGAGAACTTCCCCCGTCGAAACCGCATCATCAGCGGACTGGCCAACGGCGTGCTGGTGGTGGAGGCTGCCGAGAAGAGC
GGCTCCCTGATCACCGCCCAATACGCCCTGGAGCAGGGCAGGGACGTATTCGCCGTGCCGGGACAGATCGGCTTTGCCAG
CTGTCGCGGCAGCAACCGCCTGATCAAGCAGGGGGCCAAGCTGGTGGACTGCGTGGAGGACATGCTGGAAGAGTTGCCCG
GCTGGTGCGTTCCCTCCGGAGCGGTTTCCCCTCCGCCCGAGCCCCGCGTTTTCGCCCTGACTCCCCGGGAGGCCGGCGTC
TATGAACTGCTGGCCCGCGGGCCGCTGCACATCGACGACATCATCGTCCAAACTGAATTGACAGCCGCCGAGGTTTCCTC
TATGTTACTTCACCTTGAACTCAAGGGGGCGGTCACACCGCTCCCCGGAGCCCATTACGCCGCATGCGGCGACTGA

Upstream 100 bases:

>100_bases
CCGGCCCCACGGCCGGTCTTTTTTTACCCGGGAGCATCTCCCGACGAACACAGGAGAGGACTCCCGGCCATCAGGCCTCC
GGAGTGCGACCGAACAAACC

Downstream 100 bases:

>100_bases
CCATACACGACCGCCGCCGAGCCTGTATTCACGGCGCAGGATAGGGGGTGCGCCACGGGCAATGATCCGCTGCGCGCCAA
AATCCACCACCAAGGGACAG

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MPQRNDSSEELYWIGLKSVAGVGSVTFRRLLERFDTPRAALHAAPEELARVRGMTAAGIAAIAVGAWQRQAEEECRRLEK
SGARLVTFTSSDYPKSLFQISDPPPFLYVKGKIRSHEPAIAMVGSRRATRYGVQATARLAEELARHGVAVISGMARGVDT
AAHRGALAGDGRTIGVLGCGIDRIYPPENRDLFDEMAERGCLVSEFPLGTLPLGENFPRRNRIISGLANGVLVVEAAEKS
GSLITAQYALEQGRDVFAVPGQIGFASCRGSNRLIKQGAKLVDCVEDMLEELPGWCVPSGAVSPPPEPRVFALTPREAGV
YELLARGPLHIDDIIVQTELTAAEVSSMLLHLELKGAVTPLPGAHYAACGD

Sequences:

>Translated_371_residues
MPQRNDSSEELYWIGLKSVAGVGSVTFRRLLERFDTPRAALHAAPEELARVRGMTAAGIAAIAVGAWQRQAEEECRRLEK
SGARLVTFTSSDYPKSLFQISDPPPFLYVKGKIRSHEPAIAMVGSRRATRYGVQATARLAEELARHGVAVISGMARGVDT
AAHRGALAGDGRTIGVLGCGIDRIYPPENRDLFDEMAERGCLVSEFPLGTLPLGENFPRRNRIISGLANGVLVVEAAEKS
GSLITAQYALEQGRDVFAVPGQIGFASCRGSNRLIKQGAKLVDCVEDMLEELPGWCVPSGAVSPPPEPRVFALTPREAGV
YELLARGPLHIDDIIVQTELTAAEVSSMLLHLELKGAVTPLPGAHYAACGD
>Mature_370_residues
PQRNDSSEELYWIGLKSVAGVGSVTFRRLLERFDTPRAALHAAPEELARVRGMTAAGIAAIAVGAWQRQAEEECRRLEKS
GARLVTFTSSDYPKSLFQISDPPPFLYVKGKIRSHEPAIAMVGSRRATRYGVQATARLAEELARHGVAVISGMARGVDTA
AHRGALAGDGRTIGVLGCGIDRIYPPENRDLFDEMAERGCLVSEFPLGTLPLGENFPRRNRIISGLANGVLVVEAAEKSG
SLITAQYALEQGRDVFAVPGQIGFASCRGSNRLIKQGAKLVDCVEDMLEELPGWCVPSGAVSPPPEPRVFALTPREAGVY
ELLARGPLHIDDIIVQTELTAAEVSSMLLHLELKGAVTPLPGAHYAACGD

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=311, Percent_Identity=41.4790996784566, Blast_Score=192, Evalue=4e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39833; Mature: 39702

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRNDSSEELYWIGLKSVAGVGSVTFRRLLERFDTPRAALHAAPEELARVRGMTAAGIA
CCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCCHHHHH
AIAVGAWQRQAEEECRRLEKSGARLVTFTSSDYPKSLFQISDPPPFLYVKGKIRSHEPAI
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCE
AMVGSRRATRYGVQATARLAEELARHGVAVISGMARGVDTAAHRGALAGDGRTIGVLGCG
EEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHCCCCCCCCCEEEEEECC
IDRIYPPENRDLFDEMAERGCLVSEFPLGTLPLGENFPRRNRIISGLANGVLVVEAAEKS
CCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCC
GSLITAQYALEQGRDVFAVPGQIGFASCRGSNRLIKQGAKLVDCVEDMLEELPGWCVPSG
CCEEEEEHHHHCCCEEEECCCCCCCHHCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCC
AVSPPPEPRVFALTPREAGVYELLARGPLHIDDIIVQTELTAAEVSSMLLHLELKGAVTP
CCCCCCCCCEEEECCCCCCHHHHHHCCCCCHHHEEEECCHHHHHHHHHHEEEEECCCCCC
LPGAHYAACGD
CCCCCCCCCCC
>Mature Secondary Structure 
PQRNDSSEELYWIGLKSVAGVGSVTFRRLLERFDTPRAALHAAPEELARVRGMTAAGIA
CCCCCCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCCHHHHH
AIAVGAWQRQAEEECRRLEKSGARLVTFTSSDYPKSLFQISDPPPFLYVKGKIRSHEPAI
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCE
AMVGSRRATRYGVQATARLAEELARHGVAVISGMARGVDTAAHRGALAGDGRTIGVLGCG
EEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHCCCCCCCCCEEEEEECC
IDRIYPPENRDLFDEMAERGCLVSEFPLGTLPLGENFPRRNRIISGLANGVLVVEAAEKS
CCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCC
GSLITAQYALEQGRDVFAVPGQIGFASCRGSNRLIKQGAKLVDCVEDMLEELPGWCVPSG
CCEEEEEHHHHCCCEEEECCCCCCCHHCCCCCHHHHHCHHHHHHHHHHHHHCCCCCCCCC
AVSPPPEPRVFALTPREAGVYELLARGPLHIDDIIVQTELTAAEVSSMLLHLELKGAVTP
CCCCCCCCCEEEECCCCCCHHHHHHCCCCCHHHEEEECCHHHHHHHHHHEEEEECCCCCC
LPGAHYAACGD
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]