Click here to switch to the map view.

The map label for this gene is yqaA [H]

Identifier: 118578932

GI number: 118578932

Start: 514231

End: 514635

Strand: Reverse

Name: yqaA [H]

Synonym: Ppro_0493

Alternate gene names: 118578932

Gene position: 514635-514231 (Counterclockwise)

Preceding gene: 118578935

Following gene: 118578931

Centisome position: 12.84

GC content: 65.43

Gene sequence:

>405_bases
GTGCTGAGTTTTCTGGCGTCCAGCCTGCTCCCCCTTGGCTCCGAATGGCTGCTGGTGATGATGCTGGTCAAGGGGTATCC
CCCCCTGGCAACGGTCATGACCGCCACGCTGGGCAATTTCCTCGGTGCGGTCACCACCTACCTGATCGGCGTTCTGGGCA
GCGAATGGCTGATAACCCGCGTGCTGCGGATCTCGGAAGAACAGCTGCAGCGGGCACGCGGACGGTATCGACGCTTCGGG
GTCTGCACGCTGTTCTTCTCCTGGCTGCCGCTGATCGGCGACCCGCTCTGCCTGGTGGGGGGCATGATGCGCACGGACTT
CCGGCTGTTCACCCTGCTGGTGGCCTCGGGAAAGCTGATCCGCTACGCCGCTCTGGCCTGGGTCAGCCTGCGGGCGGCCA
CCTGA

Upstream 100 bases:

>100_bases
CGGGCAGTGTAATCGATTGAGCCTTTTTGACAACCCATTTCTTTCCACTACCCTCATGCTCCTTGACCGGTTGCATCAGC
CCGGTTACGGCTGTCTGTTC

Downstream 100 bases:

>100_bases
TACGCAGCACCTGATCCCGCCGGCAGGGCTGCCCCGACTGCCGGACAGGGCGTTTATACAAGCTACAACTTTACATCTAG
CCGGTCGGAGAGTGCATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLSFLASSLLPLGSEWLLVMMLVKGYPPLATVMTATLGNFLGAVTTYLIGVLGSEWLITRVLRISEEQLQRARGRYRRFG
VCTLFFSWLPLIGDPLCLVGGMMRTDFRLFTLLVASGKLIRYAALAWVSLRAAT

Sequences:

>Translated_134_residues
MLSFLASSLLPLGSEWLLVMMLVKGYPPLATVMTATLGNFLGAVTTYLIGVLGSEWLITRVLRISEEQLQRARGRYRRFG
VCTLFFSWLPLIGDPLCLVGGMMRTDFRLFTLLVASGKLIRYAALAWVSLRAAT
>Mature_134_residues
MLSFLASSLLPLGSEWLLVMMLVKGYPPLATVMTATLGNFLGAVTTYLIGVLGSEWLITRVLRISEEQLQRARGRYRRFG
VCTLFFSWLPLIGDPLCLVGGMMRTDFRLFTLLVASGKLIRYAALAWVSLRAAT

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=125, Percent_Identity=39.2, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 14890; Mature: 14890

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFLASSLLPLGSEWLLVMMLVKGYPPLATVMTATLGNFLGAVTTYLIGVLGSEWLITR
CHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VLRISEEQLQRARGRYRRFGVCTLFFSWLPLIGDPLCLVGGMMRTDFRLFTLLVASGKLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHH
RYAALAWVSLRAAT
HHHHHHHHHHHCCC
>Mature Secondary Structure
MLSFLASSLLPLGSEWLLVMMLVKGYPPLATVMTATLGNFLGAVTTYLIGVLGSEWLITR
CHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VLRISEEQLQRARGRYRRFGVCTLFFSWLPLIGDPLCLVGGMMRTDFRLFTLLVASGKLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHH
RYAALAWVSLRAAT
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]