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The map label for this gene is yaiC [C]

Identifier: 118578931

GI number: 118578931

Start: 513054

End: 514109

Strand: Reverse

Name: yaiC [C]

Synonym: Ppro_0492

Alternate gene names: 118578931

Gene position: 514109-513054 (Counterclockwise)

Preceding gene: 118578932

Following gene: 118578930

Centisome position: 12.83

GC content: 60.32

Gene sequence:

>1056_bases
ATGCGCATGGATTCGGCCGAGATACAACTCAGCCTGCAGCAGCGTTTCAAGGGGTACGACCGCATCATGGGAAGCATCTC
CTGGCTGCTAATCGCCCTTGTGGCGCTGGACATCAAACTCATGCCCACCGACCACTCAAGCCTGGTATTTCTGGCCTTGC
TCTGTCTGCTGCTCTTCTTCTACAACATGAACGCCCGCTACGGACTGTTCTGCAACCGCCACAGCCAGTTCAAGACCTTC
ATCGACCTGATGGTTTTTTTGGCCTTCATCATAGCGGTCTGCTGGTACACCGGCCGCATCACCAGTCCCTTCATATCGCT
GATCTACCTGGTGCTGATGGCCACGGCCCTGACCCAGGGGCGGCGGATCACCTACCTCATGGCCGGGTTGGCGATTACCT
CCTACATCCTGCTGGCGTCCGATGAGCTGCGTGATTTCTACAACCTGTCCCGCATCCTGGAACTGTTCCCCTACATGCTG
ATCGCCCACCTGGGTGCCATGCTGGCCGGAGAGACCGAGAGCGCGCGGCGGGAGGTGGAGCACCTCTCGCTGACCGATGA
AGTGACCGGCATGCACAACATGCGCAACTTCTTCCTGCTCTCCGACGTCCAGGAGAAACTGGCCAAACGCCACGACCGCG
GCTTTGCCATCTGCATGCTGGACGCCGACAACCTCAAGGCGATCAACGACGAGCATGGCCATCTGGCCGGCACGGAACTG
ATCCGTCAGGTGGCAGCCATGATCTCTTCCACCATCCGCTGTTCCGACATCTGCGCCCGTTACGGCGGCGACGAGTTCGT
GATCCTGTTCAACGAGACCAGCAAGGAAGATGTGGCCCCCACGGTGGAGCGGATCCTAAGCGGCATGGCCACCACCCCCT
TCCCCTTCGGCAGCGAGTACCTGACCACCACCATTTCCGCCGGGCTGGCGGATTTTCCCGCTGACGGTTCCGATGTCAAG
TCGGTCATGGCCAACGCCGACACCGCCATGTACGCCAGCAAGCGCAGCGGCAAGAACCGCCTGACCCTTTACACGAGCCC
GGCTCCAGCGACATGA

Upstream 100 bases:

>100_bases
GGCAGGGCTGCCCCGACTGCCGGACAGGGCGTTTATACAAGCTACAACTTTACATCTAGCCGGTCGGAGAGTGCATGCCC
GGCCGGCCCGGAGAACCTTC

Downstream 100 bases:

>100_bases
CCGACGCCATCTGCATCCAGAGGAGGAACCCATGTGCCACTCACTTCGGCTCTCAAAACTCTGCCTGGCCGCCCTGCTCT
GCCTGCTCGTCATCGCGGCG

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MRMDSAEIQLSLQQRFKGYDRIMGSISWLLIALVALDIKLMPTDHSSLVFLALLCLLLFFYNMNARYGLFCNRHSQFKTF
IDLMVFLAFIIAVCWYTGRITSPFISLIYLVLMATALTQGRRITYLMAGLAITSYILLASDELRDFYNLSRILELFPYML
IAHLGAMLAGETESARREVEHLSLTDEVTGMHNMRNFFLLSDVQEKLAKRHDRGFAICMLDADNLKAINDEHGHLAGTEL
IRQVAAMISSTIRCSDICARYGGDEFVILFNETSKEDVAPTVERILSGMATTPFPFGSEYLTTTISAGLADFPADGSDVK
SVMANADTAMYASKRSGKNRLTLYTSPAPAT

Sequences:

>Translated_351_residues
MRMDSAEIQLSLQQRFKGYDRIMGSISWLLIALVALDIKLMPTDHSSLVFLALLCLLLFFYNMNARYGLFCNRHSQFKTF
IDLMVFLAFIIAVCWYTGRITSPFISLIYLVLMATALTQGRRITYLMAGLAITSYILLASDELRDFYNLSRILELFPYML
IAHLGAMLAGETESARREVEHLSLTDEVTGMHNMRNFFLLSDVQEKLAKRHDRGFAICMLDADNLKAINDEHGHLAGTEL
IRQVAAMISSTIRCSDICARYGGDEFVILFNETSKEDVAPTVERILSGMATTPFPFGSEYLTTTISAGLADFPADGSDVK
SVMANADTAMYASKRSGKNRLTLYTSPAPAT
>Mature_351_residues
MRMDSAEIQLSLQQRFKGYDRIMGSISWLLIALVALDIKLMPTDHSSLVFLALLCLLLFFYNMNARYGLFCNRHSQFKTF
IDLMVFLAFIIAVCWYTGRITSPFISLIYLVLMATALTQGRRITYLMAGLAITSYILLASDELRDFYNLSRILELFPYML
IAHLGAMLAGETESARREVEHLSLTDEVTGMHNMRNFFLLSDVQEKLAKRHDRGFAICMLDADNLKAINDEHGHLAGTEL
IRQVAAMISSTIRCSDICARYGGDEFVILFNETSKEDVAPTVERILSGMATTPFPFGSEYLTTTISAGLADFPADGSDVK
SVMANADTAMYASKRSGKNRLTLYTSPAPAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=189, Percent_Identity=29.1005291005291, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787541, Length=175, Percent_Identity=34.8571428571429, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI145693134, Length=140, Percent_Identity=35, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1788381, Length=179, Percent_Identity=32.4022346368715, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI87082007, Length=158, Percent_Identity=29.746835443038, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1787262, Length=172, Percent_Identity=27.906976744186, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787816, Length=123, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87081881, Length=174, Percent_Identity=29.8850574712644, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788085, Length=166, Percent_Identity=27.710843373494, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787802, Length=135, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87081977, Length=212, Percent_Identity=25.9433962264151, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787056, Length=166, Percent_Identity=25.3012048192771, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 39242; Mature: 39242

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMDSAEIQLSLQQRFKGYDRIMGSISWLLIALVALDIKLMPTDHSSLVFLALLCLLLFF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHH
YNMNARYGLFCNRHSQFKTFIDLMVFLAFIIAVCWYTGRITSPFISLIYLVLMATALTQG
HCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
RRITYLMAGLAITSYILLASDELRDFYNLSRILELFPYMLIAHLGAMLAGETESARREVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
HLSLTDEVTGMHNMRNFFLLSDVQEKLAKRHDRGFAICMLDADNLKAINDEHGHLAGTEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
IRQVAAMISSTIRCSDICARYGGDEFVILFNETSKEDVAPTVERILSGMATTPFPFGSEY
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHH
LTTTISAGLADFPADGSDVKSVMANADTAMYASKRSGKNRLTLYTSPAPAT
HHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRMDSAEIQLSLQQRFKGYDRIMGSISWLLIALVALDIKLMPTDHSSLVFLALLCLLLFF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHH
YNMNARYGLFCNRHSQFKTFIDLMVFLAFIIAVCWYTGRITSPFISLIYLVLMATALTQG
HCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
RRITYLMAGLAITSYILLASDELRDFYNLSRILELFPYMLIAHLGAMLAGETESARREVE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
HLSLTDEVTGMHNMRNFFLLSDVQEKLAKRHDRGFAICMLDADNLKAINDEHGHLAGTEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
IRQVAAMISSTIRCSDICARYGGDEFVILFNETSKEDVAPTVERILSGMATTPFPFGSEY
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHH
LTTTISAGLADFPADGSDVKSVMANADTAMYASKRSGKNRLTLYTSPAPAT
HHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]