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The map label for this gene is trfA [H]

Identifier: 118578714

GI number: 118578714

Start: 266623

End: 267450

Strand: Reverse

Name: trfA [H]

Synonym: Ppro_0271

Alternate gene names: 118578714

Gene position: 267450-266623 (Counterclockwise)

Preceding gene: 118578717

Following gene: 118578713

Centisome position: 6.67

GC content: 50.48

Gene sequence:

>828_bases
TTGCAACATAACACGATGCTCCCAACTGACGATTACAGCAGTTCAGAGTCCTTCGAACAAATCCTCCAGAGCATTGCGGC
CAGACCTAAATTCCTTCCTGAATGGCCGGAAACCCAGCGAGCAATGCCCAACGAGATATTACGATCAGCACTATTCAACT
GTCGCAACCGCAATCAGGCTCGTCAATTCCTCAAAGACGCAGAAATCGCAATGATCGGTGACGGCCAGGTCATCTATCGT
GGAGAAGAACTGCGACAGGATGATGAACTGGTTTGGTTACACCTTATGCATCTTGCCAAAAAGGTCTCGCTCGGTTCCTG
CGTGTGTTTCACCCCCTACTCCTTCGTCAAGATGCTCGCATGGCCAATCAAGGGTCAGAGCTATGAACGTCTTCGAACTT
GTCTCAGCCGAATGCAGGCAACAGCCATCCGTTTTCAATCGAAGCGGATTGGAAGCTTTGTCAGTGTCTCACTGATCCTC
AAGTTCAGATCTAGAAACGATGCGAATGAGAATCTGCCTCGCTGGGAAGTCTGGGTCGGTGAAGAGATGCGCCTTCTCTT
CGACGAGGAATTCTTGACGAGGATGAACTGGGAGACCAGGAGATCCCTGCCTGACGGTATCGCATCCAAGCTGTACGGTT
ATTGGTCGAGCCACCGGAAACCTTTTCCTGTCAAGACAGAAACACTTGTCAAACTTTGCGGGTCAGGGATGGCGCTGCGT
CATTTCCGAATAGAGCTGAAGAAGGCTCTCGATGTTCTGGTCAGTGTCGGTTTTCTCGACTCTTGGCATGTTCAGGAAGA
TCTGGTGACCGTCACACGGAAGTATTGA

Upstream 100 bases:

>100_bases
GACATCATCAGACGGGATCTGGAACGCCAGGCTTTTGTACGTGAAACTGGGCTGAGCAGAGTCAAGCCGGCACCACCTCT
TTGCACCATGGAGGTGGCCA

Downstream 100 bases:

>100_bases
CCTATGACTTATCGAGTATTGACCTTTGACCGACGAACTACTGACCTTAGACCGGCAACGTATTGACCTTTGCCCTACAG
GTACTGACTTTTGACCGGCA

Product: TrfA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MQHNTMLPTDDYSSSESFEQILQSIAARPKFLPEWPETQRAMPNEILRSALFNCRNRNQARQFLKDAEIAMIGDGQVIYR
GEELRQDDELVWLHLMHLAKKVSLGSCVCFTPYSFVKMLAWPIKGQSYERLRTCLSRMQATAIRFQSKRIGSFVSVSLIL
KFRSRNDANENLPRWEVWVGEEMRLLFDEEFLTRMNWETRRSLPDGIASKLYGYWSSHRKPFPVKTETLVKLCGSGMALR
HFRIELKKALDVLVSVGFLDSWHVQEDLVTVTRKY

Sequences:

>Translated_275_residues
MQHNTMLPTDDYSSSESFEQILQSIAARPKFLPEWPETQRAMPNEILRSALFNCRNRNQARQFLKDAEIAMIGDGQVIYR
GEELRQDDELVWLHLMHLAKKVSLGSCVCFTPYSFVKMLAWPIKGQSYERLRTCLSRMQATAIRFQSKRIGSFVSVSLIL
KFRSRNDANENLPRWEVWVGEEMRLLFDEEFLTRMNWETRRSLPDGIASKLYGYWSSHRKPFPVKTETLVKLCGSGMALR
HFRIELKKALDVLVSVGFLDSWHVQEDLVTVTRKY
>Mature_275_residues
MQHNTMLPTDDYSSSESFEQILQSIAARPKFLPEWPETQRAMPNEILRSALFNCRNRNQARQFLKDAEIAMIGDGQVIYR
GEELRQDDELVWLHLMHLAKKVSLGSCVCFTPYSFVKMLAWPIKGQSYERLRTCLSRMQATAIRFQSKRIGSFVSVSLIL
KFRSRNDANENLPRWEVWVGEEMRLLFDEEFLTRMNWETRRSLPDGIASKLYGYWSSHRKPFPVKTETLVKLCGSGMALR
HFRIELKKALDVLVSVGFLDSWHVQEDLVTVTRKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010751 [H]

Pfam domain/function: PF07042 TrfA [H]

EC number: NA

Molecular weight: Translated: 32147; Mature: 32147

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHNTMLPTDDYSSSESFEQILQSIAARPKFLPEWPETQRAMPNEILRSALFNCRNRNQA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCHHHH
RQFLKDAEIAMIGDGQVIYRGEELRQDDELVWLHLMHLAKKVSLGSCVCFTPYSFVKMLA
HHHHHCCCEEEEECCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
WPIKGQSYERLRTCLSRMQATAIRFQSKRIGSFVSVSLILKFRSRNDANENLPRWEVWVG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
EEMRLLFDEEFLTRMNWETRRSLPDGIASKLYGYWSSHRKPFPVKTETLVKLCGSGMALR
CHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHH
HFRIELKKALDVLVSVGFLDSWHVQEDLVTVTRKY
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQHNTMLPTDDYSSSESFEQILQSIAARPKFLPEWPETQRAMPNEILRSALFNCRNRNQA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCHHHH
RQFLKDAEIAMIGDGQVIYRGEELRQDDELVWLHLMHLAKKVSLGSCVCFTPYSFVKMLA
HHHHHCCCEEEEECCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
WPIKGQSYERLRTCLSRMQATAIRFQSKRIGSFVSVSLILKFRSRNDANENLPRWEVWVG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
EEMRLLFDEEFLTRMNWETRRSLPDGIASKLYGYWSSHRKPFPVKTETLVKLCGSGMALR
CHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHH
HFRIELKKALDVLVSVGFLDSWHVQEDLVTVTRKY
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6374158 [H]