| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118578529
Identifier: 118578529
GI number: 118578529
Start: 94271
End: 94723
Strand: Direct
Name: 118578529
Synonym: Ppro_0081
Alternate gene names: NA
Gene position: 94271-94723 (Clockwise)
Preceding gene: 118578528
Following gene: 118578531
Centisome position: 2.35
GC content: 64.9
Gene sequence:
>453_bases TTGAGCTTCACTGTACGTAATCCTGAGTATGAGGCGCGCATACGGGAGAGGTTTGCCACCACCGGAACCATGGAGACGCT GGCTGCCAGGCTGATGCGTCTCGCTCCCGGGGAGGCCGACCTGGAACTCCCCTTCAGGCACGGCCTGAGCCAGACCAACG GCTTTTTCCACGGCGGCATCATCGGCACCATGCTGGACACCGTCTGCGGCTATGCGTCGCTGACCCTGATGCGGGCCGAG GACGAGGTGCTCACCGTGGAGTACAAGACCAACTTCCTTGCCCCGGCGGCGGGCGAACTGCTCCTGGCGCGGGGCCGGGT GATGCGCAACGGCCGCAGGATCATCGTCTGCGAGGCCGATGGCGTCATGAAAGGCGAGGGGGGAGGGGAAAAGCTGGTGG CCAGGATGACGGCCACCATGATGGCGGTGCAGCTGCGACCGCAGGGTATCTGA
Upstream 100 bases:
>100_bases GCTGCGCCAGCGTCCGTACCCCCCGTGGCTCCGGCGAGCGACGGCCAGCAGCCGGTCCAGCAGCCCTGAGGGACGAAATC ACACCAGCAAGGAGATTCTG
Downstream 100 bases:
>100_bases GGGAAGGTGAGGGCGTACCATCCACAACCAACCCCCCTCGGTCCCCCCTTATCAGGGGGGAAGCCTTTAAGCCTCCCCTG ACAAGGGGAGGTTTGGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Phenylacetic Acid Degradation Protein PaaI; Thioesterase/Thiol Ester Dehydrase-Isomerase; Phenylacetic Acid Degradation Protein Paai; Phenylacetic Acid Degradation Protein; Phenylacetic Acid Degradation Protein PAAI; Thioesterase Superfamily; LOW QUALITY PROTEIN Thioesterase Superfamily Protein; Thioesterase; Phenylacetic Acid Degradation-Like Protein; Thioesterase Domain-Containing Protein; Protein Possibly Involved In Aromatic Compounds Catabolism
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSFTVRNPEYEARIRERFATTGTMETLAARLMRLAPGEADLELPFRHGLSQTNGFFHGGIIGTMLDTVCGYASLTLMRAE DEVLTVEYKTNFLAPAAGELLLARGRVMRNGRRIIVCEADGVMKGEGGGEKLVARMTATMMAVQLRPQGI
Sequences:
>Translated_150_residues MSFTVRNPEYEARIRERFATTGTMETLAARLMRLAPGEADLELPFRHGLSQTNGFFHGGIIGTMLDTVCGYASLTLMRAE DEVLTVEYKTNFLAPAAGELLLARGRVMRNGRRIIVCEADGVMKGEGGGEKLVARMTATMMAVQLRPQGI >Mature_149_residues SFTVRNPEYEARIRERFATTGTMETLAARLMRLAPGEADLELPFRHGLSQTNGFFHGGIIGTMLDTVCGYASLTLMRAED EVLTVEYKTNFLAPAAGELLLARGRVMRNGRRIIVCEADGVMKGEGGGEKLVARMTATMMAVQLRPQGI
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16440; Mature: 16309
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTVRNPEYEARIRERFATTGTMETLAARLMRLAPGEADLELPFRHGLSQTNGFFHGGI CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEECHHHCCCCCCCCEEECCH IGTMLDTVCGYASLTLMRAEDEVLTVEYKTNFLAPAAGELLLARGRVMRNGRRIIVCEAD HHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCCCHHHHHHCCHHHHCCCEEEEECCC GVMKGEGGGEKLVARMTATMMAVQLRPQGI CEEECCCCHHHHHHHHHHHHHHEEECCCCC >Mature Secondary Structure SFTVRNPEYEARIRERFATTGTMETLAARLMRLAPGEADLELPFRHGLSQTNGFFHGGI CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEECHHHCCCCCCCCEEECCH IGTMLDTVCGYASLTLMRAEDEVLTVEYKTNFLAPAAGELLLARGRVMRNGRRIIVCEAD HHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCCCHHHHHHCCHHHHCCCEEEEECCC GVMKGEGGGEKLVARMTATMMAVQLRPQGI CEEECCCCHHHHHHHHHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA