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The map label for this gene is 118578516

Identifier: 118578516

GI number: 118578516

Start: 79363

End: 79872

Strand: Direct

Name: 118578516

Synonym: Ppro_0068

Alternate gene names: NA

Gene position: 79363-79872 (Clockwise)

Preceding gene: 118578515

Following gene: 118578517

Centisome position: 1.98

GC content: 64.9

Gene sequence:

>510_bases
ATGAACCACTTTTTGCTGGCAGCGCTCCTGCTGCTCCTGACCTGCACGGATGCCTGCGCCGGCCAGACCGTCCAGGGGAT
GGTGCGGGCCGTATTTGACGGGGATACGCTGCTCCTGGCCACGCCGGGCCGGAGTCGTCTCACGGTGCGTCTTTACGGCA
TTGACGCCCCGGAAATATCAAAACCTGAGCGTCCCGGGCAGCCCTTCGGGGCCGTTGCCCGGCGGACGCTGATGTACAAG
GTCATGGGGCGCCAGGTGACGGCGGAGATCGTGGAAAGCGACCAGTACCAGCGCAGCGTGGCGGTGATCCGCTATTCCGG
GCGGGACATCAATTACGAGATGGTTGCCGAGGGGATGGCCTGGGCCTATCGTCACTATCTGGCTGGGAGCTACGCATCGG
AGTACATCGGCGCGGAACAGGCCGCCCGGCTCAGCCAGTGTGGGCTCTGGCGCGACGCCAATCCCCGCCCTCCCTGGGAG
TTCAGGAAGAGCGGTCAACGGCAGCGATAA

Upstream 100 bases:

>100_bases
GGATCCAGAACCCCACCCTTCCAAGGGAGACACCGTTGGCCGACGCCTCGCTGTGGTTCGATCCGGCTGCGATGAAGTGA
CGGGTGGGGAGAAGTTATCC

Downstream 100 bases:

>100_bases
TGGGTGCGGGCACCTTTCGCCACCCAGAAGTGCATTGACGTTTACCGGGTGATGGCATATTGTTTTCAGTCAGCCGCCCT
GGGAGCGCCAAGTCCTTGGG

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MNHFLLAALLLLLTCTDACAGQTVQGMVRAVFDGDTLLLATPGRSRLTVRLYGIDAPEISKPERPGQPFGAVARRTLMYK
VMGRQVTAEIVESDQYQRSVAVIRYSGRDINYEMVAEGMAWAYRHYLAGSYASEYIGAEQAARLSQCGLWRDANPRPPWE
FRKSGQRQR

Sequences:

>Translated_169_residues
MNHFLLAALLLLLTCTDACAGQTVQGMVRAVFDGDTLLLATPGRSRLTVRLYGIDAPEISKPERPGQPFGAVARRTLMYK
VMGRQVTAEIVESDQYQRSVAVIRYSGRDINYEMVAEGMAWAYRHYLAGSYASEYIGAEQAARLSQCGLWRDANPRPPWE
FRKSGQRQR
>Mature_169_residues
MNHFLLAALLLLLTCTDACAGQTVQGMVRAVFDGDTLLLATPGRSRLTVRLYGIDAPEISKPERPGQPFGAVARRTLMYK
VMGRQVTAEIVESDQYQRSVAVIRYSGRDINYEMVAEGMAWAYRHYLAGSYASEYIGAEQAARLSQCGLWRDANPRPPWE
FRKSGQRQR

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321353, Length=140, Percent_Identity=31.4285714285714, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 18962; Mature: 18962

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS01123 TNASE_1 ; PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHFLLAALLLLLTCTDACAGQTVQGMVRAVFDGDTLLLATPGRSRLTVRLYGIDAPEIS
CCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCC
KPERPGQPFGAVARRTLMYKVMGRQVTAEIVESDQYQRSVAVIRYSGRDINYEMVAEGMA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHH
WAYRHYLAGSYASEYIGAEQAARLSQCGLWRDANPRPPWEFRKSGQRQR
HHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MNHFLLAALLLLLTCTDACAGQTVQGMVRAVFDGDTLLLATPGRSRLTVRLYGIDAPEIS
CCHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCC
KPERPGQPFGAVARRTLMYKVMGRQVTAEIVESDQYQRSVAVIRYSGRDINYEMVAEGMA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHH
WAYRHYLAGSYASEYIGAEQAARLSQCGLWRDANPRPPWEFRKSGQRQR
HHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]