| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is atoS [C]
Identifier: 118578514
GI number: 118578514
Start: 76163
End: 78409
Strand: Direct
Name: atoS [C]
Synonym: Ppro_0066
Alternate gene names: 118578514
Gene position: 76163-78409 (Clockwise)
Preceding gene: 118578513
Following gene: 118578515
Centisome position: 1.9
GC content: 54.61
Gene sequence:
>2247_bases ATGAAAAGACACGATACGTCGGTGACAAAAATTATTGTTTTAACGCTGGTAGCGGTTATGACCATTGTTTTGTCCGCTTT CGGTAGTGCGAATTACTATTGGGAACGGAGCCAGAGGACCGGTGACCTGGAATATCATCTTACGGTCATCTCTTCCCAGC TTGCCAGCAGCCTTGCCCTCCCGCTGTGGAACTTTGACACCAAGCAGGTTGACAAGGTTATCGAAAGCACCATGCGGCAC CCTGACGTTTTCGGTGTGATCGTCAGGGGGGCCGACGGTGTCGCGGGTATATCCGGTTTTGTGAGGGATCCACAGTGGCG GGCGGTTCCGTCGAAAGGCGAAATCCGTAACAGGGGGTTGTTGTCCCGGACGGAAAAAATCAGTATCCATGGCAGCCAGG TGGGTGTCGTGCACCTTTTCATGACCCCCAGGTTCTTGGAAAGATCGATGCACCGTTTTGCCATCAATAACATTGTGGCA ATCGTTACCCTGAATGTCTTCCTGGTTTTCATTCCTTTTCAACTTATTCGGCGAAACGTGATCATACCGTTGCAAGCGAT TGAAACCTATGCCCTGAAAGTCAGTTCGGGAGAGGCGGAAGCTGCGGATGTCCCTGAAGGTGACTTTTTCGGCGAACTGA ACAATCTCAATCGTTCAATCGTCGGAATGACCCGCTCCCTTGCCGAAGCGCGGCAGGAACAGGTACGCAAGACTGCGGAA CAGGTGTTGCGGGAGAGCGAGACAATCCTCAGGGCATTCATTGACGTTATGCCGGTCGGTGTCAGATGGAGCGACAGCGA CGACGTCATTAAACATGTCAACACCTGTTTCATTGAGATGTTCGGCTACACTGCTGCCGACATTCCAACGCTTGATGAAT GGTTTTTGCGTGCCTATCCCGATCCGGACAGGCGCGAGTATATCAGCTCCCGCCGCAAGGCGGTTGTTCGCGCAGCCCTC GTGGATGGTACGCCAATCCAGCCGTTGGAGTCGATTATTGCGTGCAAGGACGGCTCTGACCGGCATGTCATTGTCAATAC CCAGTTTTCCCGGGATCTCCGTCTGGATATTTTCACCGATATTACGGAGCGCGAATCTCTGCAGAACAGGCTGCTCAACG CCCAGCGCCTCGAATCCCTGGGGGTGCTTGCCGGAGGGATCGCCCATGATTTCAACAATATCCTCACCGGCATCATGGGA AACATCTCCATGGCGCGCATGGTTCTGGCCATGCCGGGAAAATCGGACAAGCTCCTGGATAATGCTGAAAAAGCGGCCCT CCGGGCAACCGAACTCGCCACCCAGTTGTTGACCTTCGCCAAAGGCGGAGCTCCCGTAAAGAAAACCGTATCGATACGGA AGATCGTAGACGAATCATTGTCCCTGGCCATTCGGGGTACGAACGTCAAGGGGGTGGTGCAGCTTCCCGATTCCCTCCAC GACATCGAAGCTGATGAAGGTCAAGTCAGCCAGGTGTTCAACAACATCGTCATCAATGCCGTACAAGCCATGCCGGGAGG GGGGGAGATATCCGTGCACGGGATGAATGTGGTCCTGGGGAGCGAAAACAGGTTCATACTGCCCCCCGGTGACTACGTCA AACTCTCGTTCACCGATCAGGGGTGCGGCATGCCGGAAGATGTGCGGAAAAAGATTTTCGACCCCTACTTCACCACAAAG TCACATGGCATGGGCCTTGGCCTCGCCTCAGTCCACTCCATAGTGAAGCGGCATGGTGGATATATTGACGTTCGCTCCAC GATCGGCGAAGGGACGACATTTACCCTGTTACTGCCCTCGACCGGAAAGACCTCATTGGAAGAGGAGACCGGTGAAAGGG TCACGCAGTGTGACGTTCCAGCGGAAGGGGCAGTGCTCGTCATGGACGATGAAGAGATGATCCGCGAGCTTGCGGCTGAA ATACTCGGACACCTGGGCTATGAGGTGACAACCTGCGCCAGCGGTGAAGAGGCAATAAGGATGTACCTTGGGGCCAAGGA AGGAAACAAGCCGTTTTCATACGTGATTATGGATCTTACGGTACCGGGCGGGATGGGTGGCAGGGAAAGCGCGGCAGAGA TTCTGGCGTTTGATCCCTGTGCCCGCTTGATCGCTTCAAGCGGCTATTCCAACAACCCTGTCATGGCCAGCTTCCGCGAC TACGGCTTTTGCGGGGCAATTGTCAAGCCCTATACTCCGGCTGAACTGGCGCGGGTAGTGCATTCTATCGTTGCGGCACG GGTTTGA
Upstream 100 bases:
>100_bases CGCCCCATGGCGGATACGACCGAGTTCAACTATGCCAACGAGTTGGTGTAGGGAAGACGTGAATGCCCGCCAGTGATATG GTTTGAATAGGGCCGAACCC
Downstream 100 bases:
>100_bases GTTCGAAAAAGAGGGGCGAAACAGGCCCTGGATACAATTCGATGTGGGGAGCATCCAATGATGCGTTTGCTTGCACTGTC GGTGCTGTTCATCATACTGA
Product: multi-sensor hybrid histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MKRHDTSVTKIIVLTLVAVMTIVLSAFGSANYYWERSQRTGDLEYHLTVISSQLASSLALPLWNFDTKQVDKVIESTMRH PDVFGVIVRGADGVAGISGFVRDPQWRAVPSKGEIRNRGLLSRTEKISIHGSQVGVVHLFMTPRFLERSMHRFAINNIVA IVTLNVFLVFIPFQLIRRNVIIPLQAIETYALKVSSGEAEAADVPEGDFFGELNNLNRSIVGMTRSLAEARQEQVRKTAE QVLRESETILRAFIDVMPVGVRWSDSDDVIKHVNTCFIEMFGYTAADIPTLDEWFLRAYPDPDRREYISSRRKAVVRAAL VDGTPIQPLESIIACKDGSDRHVIVNTQFSRDLRLDIFTDITERESLQNRLLNAQRLESLGVLAGGIAHDFNNILTGIMG NISMARMVLAMPGKSDKLLDNAEKAALRATELATQLLTFAKGGAPVKKTVSIRKIVDESLSLAIRGTNVKGVVQLPDSLH DIEADEGQVSQVFNNIVINAVQAMPGGGEISVHGMNVVLGSENRFILPPGDYVKLSFTDQGCGMPEDVRKKIFDPYFTTK SHGMGLGLASVHSIVKRHGGYIDVRSTIGEGTTFTLLLPSTGKTSLEEETGERVTQCDVPAEGAVLVMDDEEMIRELAAE ILGHLGYEVTTCASGEEAIRMYLGAKEGNKPFSYVIMDLTVPGGMGGRESAAEILAFDPCARLIASSGYSNNPVMASFRD YGFCGAIVKPYTPAELARVVHSIVAARV
Sequences:
>Translated_748_residues MKRHDTSVTKIIVLTLVAVMTIVLSAFGSANYYWERSQRTGDLEYHLTVISSQLASSLALPLWNFDTKQVDKVIESTMRH PDVFGVIVRGADGVAGISGFVRDPQWRAVPSKGEIRNRGLLSRTEKISIHGSQVGVVHLFMTPRFLERSMHRFAINNIVA IVTLNVFLVFIPFQLIRRNVIIPLQAIETYALKVSSGEAEAADVPEGDFFGELNNLNRSIVGMTRSLAEARQEQVRKTAE QVLRESETILRAFIDVMPVGVRWSDSDDVIKHVNTCFIEMFGYTAADIPTLDEWFLRAYPDPDRREYISSRRKAVVRAAL VDGTPIQPLESIIACKDGSDRHVIVNTQFSRDLRLDIFTDITERESLQNRLLNAQRLESLGVLAGGIAHDFNNILTGIMG NISMARMVLAMPGKSDKLLDNAEKAALRATELATQLLTFAKGGAPVKKTVSIRKIVDESLSLAIRGTNVKGVVQLPDSLH DIEADEGQVSQVFNNIVINAVQAMPGGGEISVHGMNVVLGSENRFILPPGDYVKLSFTDQGCGMPEDVRKKIFDPYFTTK SHGMGLGLASVHSIVKRHGGYIDVRSTIGEGTTFTLLLPSTGKTSLEEETGERVTQCDVPAEGAVLVMDDEEMIRELAAE ILGHLGYEVTTCASGEEAIRMYLGAKEGNKPFSYVIMDLTVPGGMGGRESAAEILAFDPCARLIASSGYSNNPVMASFRD YGFCGAIVKPYTPAELARVVHSIVAARV >Mature_748_residues MKRHDTSVTKIIVLTLVAVMTIVLSAFGSANYYWERSQRTGDLEYHLTVISSQLASSLALPLWNFDTKQVDKVIESTMRH PDVFGVIVRGADGVAGISGFVRDPQWRAVPSKGEIRNRGLLSRTEKISIHGSQVGVVHLFMTPRFLERSMHRFAINNIVA IVTLNVFLVFIPFQLIRRNVIIPLQAIETYALKVSSGEAEAADVPEGDFFGELNNLNRSIVGMTRSLAEARQEQVRKTAE QVLRESETILRAFIDVMPVGVRWSDSDDVIKHVNTCFIEMFGYTAADIPTLDEWFLRAYPDPDRREYISSRRKAVVRAAL VDGTPIQPLESIIACKDGSDRHVIVNTQFSRDLRLDIFTDITERESLQNRLLNAQRLESLGVLAGGIAHDFNNILTGIMG NISMARMVLAMPGKSDKLLDNAEKAALRATELATQLLTFAKGGAPVKKTVSIRKIVDESLSLAIRGTNVKGVVQLPDSLH DIEADEGQVSQVFNNIVINAVQAMPGGGEISVHGMNVVLGSENRFILPPGDYVKLSFTDQGCGMPEDVRKKIFDPYFTTK SHGMGLGLASVHSIVKRHGGYIDVRSTIGEGTTFTLLLPSTGKTSLEEETGERVTQCDVPAEGAVLVMDDEEMIRELAAE ILGHLGYEVTTCASGEEAIRMYLGAKEGNKPFSYVIMDLTVPGGMGGRESAAEILAFDPCARLIASSGYSNNPVMASFRD YGFCGAIVKPYTPAELARVVHSIVAARV
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=248, Percent_Identity=35.8870967741936, Blast_Score=135, Evalue=9e-33, Organism=Escherichia coli, GI1790436, Length=243, Percent_Identity=36.6255144032922, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI48994928, Length=350, Percent_Identity=27.1428571428571, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1790300, Length=247, Percent_Identity=29.5546558704453, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786912, Length=256, Percent_Identity=27.34375, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI145693157, Length=280, Percent_Identity=23.9285714285714, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 82018; Mature: 82018
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHDTSVTKIIVLTLVAVMTIVLSAFGSANYYWERSQRTGDLEYHLTVISSQLASSLAL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHCC PLWNFDTKQVDKVIESTMRHPDVFGVIVRGADGVAGISGFVRDPQWRAVPSKGEIRNRGL CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHCHHHCCCCCCCCCCCCCCCCCCCC LSRTEKISIHGSQVGVVHLFMTPRFLERSMHRFAINNIVAIVTLNVFLVFIPFQLIRRNV CCCCCEEEEECCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IIPLQAIETYALKVSSGEAEAADVPEGDFFGELNNLNRSIVGMTRSLAEARQEQVRKTAE EEEHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH QVLRESETILRAFIDVMPVGVRWSDSDDVIKHVNTCFIEMFGYTAADIPTLDEWFLRAYP HHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC DPDRREYISSRRKAVVRAALVDGTPIQPLESIIACKDGSDRHVIVNTQFSRDLRLDIFTD CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCEEEEHHHC ITERESLQNRLLNAQRLESLGVLAGGIAHDFNNILTGIMGNISMARMVLAMPGKSDKLLD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHH NAEKAALRATELATQLLTFAKGGAPVKKTVSIRKIVDESLSLAIRGTNVKGVVQLPDSLH HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCHH DIEADEGQVSQVFNNIVINAVQAMPGGGEISVHGMNVVLGSENRFILPPGDYVKLSFTDQ CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEECCCCEEEEEECCC GCGMPEDVRKKIFDPYFTTKSHGMGLGLASVHSIVKRHGGYIDVRSTIGEGTTFTLLLPS CCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHCCCCCEEEEEECC TGKTSLEEETGERVTQCDVPAEGAVLVMDDEEMIRELAAEILGHLGYEVTTCASGEEAIR CCCCCHHHHHCCCCEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCHHHHH MYLGAKEGNKPFSYVIMDLTVPGGMGGRESAAEILAFDPCARLIASSGYSNNPVMASFRD HHCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHEECHHHHHHHCCCCCCCCEEEECCC YGFCGAIVKPYTPAELARVVHSIVAARV CCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRHDTSVTKIIVLTLVAVMTIVLSAFGSANYYWERSQRTGDLEYHLTVISSQLASSLAL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHCC PLWNFDTKQVDKVIESTMRHPDVFGVIVRGADGVAGISGFVRDPQWRAVPSKGEIRNRGL CCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHCHHHCCCCCCCCCCCCCCCCCCCC LSRTEKISIHGSQVGVVHLFMTPRFLERSMHRFAINNIVAIVTLNVFLVFIPFQLIRRNV CCCCCEEEEECCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IIPLQAIETYALKVSSGEAEAADVPEGDFFGELNNLNRSIVGMTRSLAEARQEQVRKTAE EEEHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH QVLRESETILRAFIDVMPVGVRWSDSDDVIKHVNTCFIEMFGYTAADIPTLDEWFLRAYP HHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC DPDRREYISSRRKAVVRAALVDGTPIQPLESIIACKDGSDRHVIVNTQFSRDLRLDIFTD CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCEEEEHHHC ITERESLQNRLLNAQRLESLGVLAGGIAHDFNNILTGIMGNISMARMVLAMPGKSDKLLD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHH NAEKAALRATELATQLLTFAKGGAPVKKTVSIRKIVDESLSLAIRGTNVKGVVQLPDSLH HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCHH DIEADEGQVSQVFNNIVINAVQAMPGGGEISVHGMNVVLGSENRFILPPGDYVKLSFTDQ CCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEECCCCEEEEEECCC GCGMPEDVRKKIFDPYFTTKSHGMGLGLASVHSIVKRHGGYIDVRSTIGEGTTFTLLLPS CCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHCCCCCEEEEEECC TGKTSLEEETGERVTQCDVPAEGAVLVMDDEEMIRELAAEILGHLGYEVTTCASGEEAIR CCCCCHHHHHCCCCEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCHHHHH MYLGAKEGNKPFSYVIMDLTVPGGMGGRESAAEILAFDPCARLIASSGYSNNPVMASFRD HHCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHEECHHHHHHHCCCCCCCCEEEECCC YGFCGAIVKPYTPAELARVVHSIVAARV CCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA