| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yloA [H]
Identifier: 118479097
GI number: 118479097
Start: 3722275
End: 3723984
Strand: Direct
Name: yloA [H]
Synonym: BALH_3506
Alternate gene names: 118479097
Gene position: 3722275-3723984 (Clockwise)
Preceding gene: 118479080
Following gene: 118479098
Centisome position: 70.8
GC content: 33.68
Gene sequence:
>1710_bases ATGGCATTCGATGGATTATTTACAAGAGCGATTACACATGAAATTGCAAATTCTCTTTACACGGGAAGAATTTCAAAAAT ATATCAACCTTCAAAATACGAGATTTTATTACATATTCGAGCAAACGGAAAAAATCAAAAACTCATTCTTTCCGCTCATC CGACATATGCACGTTTACACTTAACAAATCAAAATTACGATTCACCTGCACTTCCACCAATGTTCTGTATGCTTCTTCGT AAGCATTTAGAAGGTGGATTCATTGAAAAAATTGAACAAATTGATTTAGAACGTATTATTCAAATTACCGTTCGTAGCAG AAATGAAATTGGTGATGAATCGCTAAAAACATTAGTAATTGAAATTATGGGCCGACATAGTAACATTATTTTAGTAGACA CGAAAACAAACAATATTTTAGATAGCTTAAAACACGTTTCTTTAGCAGTAAACCGACATCGAACTGTATACGCTGGAGCT GAATATATTGCACCACCAGCACAACATAAAATTAACCCACTTCAGATCGAAACAAATGATGAATTTATTAGACCGCTAGA CTTTCTATCTGGAAACATGGATAAACAGCTTGTCGGCACCTTTACAGGAATATCACCGTTATTCGCAAAAGAAGTCGTGA AAAAAGCTGGTATGGTAAATGAAAAAGCATTAGCCGATGCATTTTTCTCCATACAAAAACCATTATTAACTCATACATAT TCGCCAACAATGACTACTTCAAATGGGAAAGAATTCTTTTATCTTTTCCCTCTTGCGCACTTAGCAGGAGATAACAAGAC ATTCTCATCTGTTAGTGAATTGCTAGACCGTTTCTTTTTCGGAAAAGCAGAGCGTGACCGTGTAAAACAACAAGCTCATG ATTTAGAGCGCTTTATGCAAAACGAAAAAAATAAAAATGAGAAAAAACTCATTAAACTAGAAAAAACATTACAAGATGCT GAAAAAGCAGATAAATATCAACTATTTGGAGAACTACTTACAGCCAATATGTACGCTTTGAAAAAAGGCGATAAAGACAT TGAAGTCGTTAACTATTACGATGAAAATGGCGGAACTGTAAAGATTGCATTAGATCCTTTAAAAACACCATCTGAAAATG CACAACGTTATTTCCAAAAGTACCAAAAAGCGAAAAATTCAGTTGTTGTTGTTGAAGAACAAATCAAAAAAACAAAGGAA GAAATTCTTTATTTCGATAGCTTACTTCAACAAATGGAAGCTGCTTCTTCAAAAGATATTGAAGAAATTCGTGAGGAATT AGCTGAAGAAGGTTATATGCGCAATCGTAAAACGAAAAACGCAAAGAAAAAGCCTACTAAACCAGTATTAGATAAATATG TAGCAAGTGATGGTACAGAAATTTTCGTCGGTAAAAATAATAAACAAAATGATTATTTAACAACGAAATTTGCCCGTCGT GATGAAATTTGGTTACATACGAAAGACATACCTGGTTCTCACGTTGTCATTCGTTCTTTAGAACCTGCTGAAGAAACTTT ACTAGAAGCTGCCAAAATTGCTGCTTATTATAGTAAAGCAAAAGAGTCTAGTTCTGTACCTGTTGATTTCACAAAAATAC GCCATGTGAAAAAACCGAGTGGTGCAAAACTTGGTTTTGTTACTTATGACAATCAACAAACTGTATATGTAACACCAGAT GCAGATACTGTAATGAAATTAAAAGCTTAA
Upstream 100 bases:
>100_bases TATCGACCTCCTGATTCCAGACATACTCTATTGAAAGCTTATTCAGCCTCGTCCAAAAAAATGCTATAATTAACTTTTAG TTAGAAAGGAGTGTTCATTT
Downstream 100 bases:
>100_bases ATACAAAAATGCGTTGCTTATAAGCAGCGCATTTTTTATTCTTTCCCATTAGTTCGTAATATCTTTCTTTTGTCATTTTA TATATTGTCAAAAAGATTGA
Product: fibronectin-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MAFDGLFTRAITHEIANSLYTGRISKIYQPSKYEILLHIRANGKNQKLILSAHPTYARLHLTNQNYDSPALPPMFCMLLR KHLEGGFIEKIEQIDLERIIQITVRSRNEIGDESLKTLVIEIMGRHSNIILVDTKTNNILDSLKHVSLAVNRHRTVYAGA EYIAPPAQHKINPLQIETNDEFIRPLDFLSGNMDKQLVGTFTGISPLFAKEVVKKAGMVNEKALADAFFSIQKPLLTHTY SPTMTTSNGKEFFYLFPLAHLAGDNKTFSSVSELLDRFFFGKAERDRVKQQAHDLERFMQNEKNKNEKKLIKLEKTLQDA EKADKYQLFGELLTANMYALKKGDKDIEVVNYYDENGGTVKIALDPLKTPSENAQRYFQKYQKAKNSVVVVEEQIKKTKE EILYFDSLLQQMEAASSKDIEEIREELAEEGYMRNRKTKNAKKKPTKPVLDKYVASDGTEIFVGKNNKQNDYLTTKFARR DEIWLHTKDIPGSHVVIRSLEPAEETLLEAAKIAAYYSKAKESSSVPVDFTKIRHVKKPSGAKLGFVTYDNQQTVYVTPD ADTVMKLKA
Sequences:
>Translated_569_residues MAFDGLFTRAITHEIANSLYTGRISKIYQPSKYEILLHIRANGKNQKLILSAHPTYARLHLTNQNYDSPALPPMFCMLLR KHLEGGFIEKIEQIDLERIIQITVRSRNEIGDESLKTLVIEIMGRHSNIILVDTKTNNILDSLKHVSLAVNRHRTVYAGA EYIAPPAQHKINPLQIETNDEFIRPLDFLSGNMDKQLVGTFTGISPLFAKEVVKKAGMVNEKALADAFFSIQKPLLTHTY SPTMTTSNGKEFFYLFPLAHLAGDNKTFSSVSELLDRFFFGKAERDRVKQQAHDLERFMQNEKNKNEKKLIKLEKTLQDA EKADKYQLFGELLTANMYALKKGDKDIEVVNYYDENGGTVKIALDPLKTPSENAQRYFQKYQKAKNSVVVVEEQIKKTKE EILYFDSLLQQMEAASSKDIEEIREELAEEGYMRNRKTKNAKKKPTKPVLDKYVASDGTEIFVGKNNKQNDYLTTKFARR DEIWLHTKDIPGSHVVIRSLEPAEETLLEAAKIAAYYSKAKESSSVPVDFTKIRHVKKPSGAKLGFVTYDNQQTVYVTPD ADTVMKLKA >Mature_568_residues AFDGLFTRAITHEIANSLYTGRISKIYQPSKYEILLHIRANGKNQKLILSAHPTYARLHLTNQNYDSPALPPMFCMLLRK HLEGGFIEKIEQIDLERIIQITVRSRNEIGDESLKTLVIEIMGRHSNIILVDTKTNNILDSLKHVSLAVNRHRTVYAGAE YIAPPAQHKINPLQIETNDEFIRPLDFLSGNMDKQLVGTFTGISPLFAKEVVKKAGMVNEKALADAFFSIQKPLLTHTYS PTMTTSNGKEFFYLFPLAHLAGDNKTFSSVSELLDRFFFGKAERDRVKQQAHDLERFMQNEKNKNEKKLIKLEKTLQDAE KADKYQLFGELLTANMYALKKGDKDIEVVNYYDENGGTVKIALDPLKTPSENAQRYFQKYQKAKNSVVVVEEQIKKTKEE ILYFDSLLQQMEAASSKDIEEIREELAEEGYMRNRKTKNAKKKPTKPVLDKYVASDGTEIFVGKNNKQNDYLTTKFARRD EIWLHTKDIPGSHVVIRSLEPAEETLLEAAKIAAYYSKAKESSSVPVDFTKIRHVKKPSGAKLGFVTYDNQQTVYVTPDA DTVMKLKA
Specific function: Unknown
COG id: COG1293
COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SDCCAG1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008532 - InterPro: IPR008616 [H]
Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]
EC number: NA
Molecular weight: Translated: 64872; Mature: 64741
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDGLFTRAITHEIANSLYTGRISKIYQPSKYEILLHIRANGKNQKLILSAHPTYARLH CCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCEEEEE LTNQNYDSPALPPMFCMLLRKHLEGGFIEKIEQIDLERIIQITVRSRNEIGDESLKTLVI ECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EIMGRHSNIILVDTKTNNILDSLKHVSLAVNRHRTVYAGAEYIAPPAQHKINPLQIETND HHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCHHCCCCHHCCCCCEEEECCC EFIRPLDFLSGNMDKQLVGTFTGISPLFAKEVVKKAGMVNEKALADAFFSIQKPLLTHTY CHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCCC SPTMTTSNGKEFFYLFPLAHLAGDNKTFSSVSELLDRFFFGKAERDRVKQQAHDLERFMQ CCCEECCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH NEKNKNEKKLIKLEKTLQDAEKADKYQLFGELLTANMYALKKGDKDIEVVNYYDENGGTV HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEE KIALDPLKTPSENAQRYFQKYQKAKNSVVVVEEQIKKTKEEILYFDSLLQQMEAASSKDI EEEECCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EEIREELAEEGYMRNRKTKNAKKKPTKPVLDKYVASDGTEIFVGKNNKQNDYLTTKFARR HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHCCC DEIWLHTKDIPGSHVVIRSLEPAEETLLEAAKIAAYYSKAKESSSVPVDFTKIRHVKKPS CCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCC GAKLGFVTYDNQQTVYVTPDADTVMKLKA CCEEEEEEECCCEEEEECCCCCCEEEECC >Mature Secondary Structure AFDGLFTRAITHEIANSLYTGRISKIYQPSKYEILLHIRANGKNQKLILSAHPTYARLH CCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCEEEEE LTNQNYDSPALPPMFCMLLRKHLEGGFIEKIEQIDLERIIQITVRSRNEIGDESLKTLVI ECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EIMGRHSNIILVDTKTNNILDSLKHVSLAVNRHRTVYAGAEYIAPPAQHKINPLQIETND HHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCHHCCCCHHCCCCCEEEECCC EFIRPLDFLSGNMDKQLVGTFTGISPLFAKEVVKKAGMVNEKALADAFFSIQKPLLTHTY CHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCCC SPTMTTSNGKEFFYLFPLAHLAGDNKTFSSVSELLDRFFFGKAERDRVKQQAHDLERFMQ CCCEECCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH NEKNKNEKKLIKLEKTLQDAEKADKYQLFGELLTANMYALKKGDKDIEVVNYYDENGGTV HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEE KIALDPLKTPSENAQRYFQKYQKAKNSVVVVEEQIKKTKEEILYFDSLLQQMEAASSKDI EEEECCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EEIREELAEEGYMRNRKTKNAKKKPTKPVLDKYVASDGTEIFVGKNNKQNDYLTTKFARR HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCEEHHHCCC DEIWLHTKDIPGSHVVIRSLEPAEETLLEAAKIAAYYSKAKESSSVPVDFTKIRHVKKPS CCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCCCC GAKLGFVTYDNQQTVYVTPDADTVMKLKA CCEEEEEEECCCEEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9534248 [H]