| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118478904
Identifier: 118478904
GI number: 118478904
Start: 3507373
End: 3507948
Strand: Reverse
Name: 118478904
Synonym: BALH_3307
Alternate gene names: NA
Gene position: 3507948-3507373 (Counterclockwise)
Preceding gene: 118478905
Following gene: 118478903
Centisome position: 66.73
GC content: 29.69
Gene sequence:
>576_bases ATGTCTTTATGTCGGTTAGCGAGAAAAAATATAAGAACATTTGCTACCAAAAGGATGAAGCAATTTATGTGGATTGCTAT GAGTACTATGGTTTTATTTTTTATGATATCGCTCCAATTTAATGAAGGAGCTATTGGGGAATTAGAGACTACACTTTTAT TTCATATGTGCTTTTATACGCTGTTTATTGTATTCATTTTTATATGTATTTTTACTACATATAAAATAACGTTTTCTCTT CTGCAAGTGAGGAAAGAGGAAATTAAATCTTATGTAGTAGAAAATAGGAAGAGAAATGATGTACTATGTGTATTGTGTCA GGAGCAATTATTTATTTATGGAGCAGCGTTTGTTTTTGGATTAGTTAATGGGATGTTATTTTTGAAGTTATTTACGATTA TCTTTATGAAAATAGCAGGAATACAAGGTGTAAATAGTGCACCGATTACAATATATGCAATAGTTGTTGTTAGTATAATT ATGATCGTTATCGTCCTGTTATCGATGATGCAATGTTTTCGATTTGTTCAAAGTTTACATGATAAAAATTCGTTTCATTT CAAGGAAAAGGCATGA
Upstream 100 bases:
>100_bases ACTTAGAGGAAATTCCGATTGTAGTGCGATGTTTAAAATGTCATATTTTTATACACTAGTAGTATAGAATGCGTATGTAA TAAGGTAGGGGAAGAATTTT
Downstream 100 bases:
>100_bases GAAATCATGCCTTTTTCGATTTTACACATAAAAATAATCATGTTACAGTGTAAAGACCTGACAAAGAATGGGAAGGAAAG GTTGTATAGAATGACAAATG
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSLCRLARKNIRTFATKRMKQFMWIAMSTMVLFFMISLQFNEGAIGELETTLLFHMCFYTLFIVFIFICIFTTYKITFSL LQVRKEEIKSYVVENRKRNDVLCVLCQEQLFIYGAAFVFGLVNGMLFLKLFTIIFMKIAGIQGVNSAPITIYAIVVVSII MIVIVLLSMMQCFRFVQSLHDKNSFHFKEKA
Sequences:
>Translated_191_residues MSLCRLARKNIRTFATKRMKQFMWIAMSTMVLFFMISLQFNEGAIGELETTLLFHMCFYTLFIVFIFICIFTTYKITFSL LQVRKEEIKSYVVENRKRNDVLCVLCQEQLFIYGAAFVFGLVNGMLFLKLFTIIFMKIAGIQGVNSAPITIYAIVVVSII MIVIVLLSMMQCFRFVQSLHDKNSFHFKEKA >Mature_190_residues SLCRLARKNIRTFATKRMKQFMWIAMSTMVLFFMISLQFNEGAIGELETTLLFHMCFYTLFIVFIFICIFTTYKITFSLL QVRKEEIKSYVVENRKRNDVLCVLCQEQLFIYGAAFVFGLVNGMLFLKLFTIIFMKIAGIQGVNSAPITIYAIVVVSIIM IVIVLLSMMQCFRFVQSLHDKNSFHFKEKA
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22266; Mature: 22135
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLCRLARKNIRTFATKRMKQFMWIAMSTMVLFFMISLQFNEGAIGELETTLLFHMCFYT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LFIVFIFICIFTTYKITFSLLQVRKEEIKSYVVENRKRNDVLCVLCQEQLFIYGAAFVFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LVNGMLFLKLFTIIFMKIAGIQGVNSAPITIYAIVVVSIIMIVIVLLSMMQCFRFVQSLH HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKNSFHFKEKA CCCCCCCCCCC >Mature Secondary Structure SLCRLARKNIRTFATKRMKQFMWIAMSTMVLFFMISLQFNEGAIGELETTLLFHMCFYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LFIVFIFICIFTTYKITFSLLQVRKEEIKSYVVENRKRNDVLCVLCQEQLFIYGAAFVFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LVNGMLFLKLFTIIFMKIAGIQGVNSAPITIYAIVVVSIIMIVIVLLSMMQCFRFVQSLH HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKNSFHFKEKA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA