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The map label for this gene is gdhII [H]

Identifier: 118478729

GI number: 118478729

Start: 3301874

End: 3302209

Strand: Direct

Name: gdhII [H]

Synonym: BALH_3119

Alternate gene names: 118478729

Gene position: 3301874-3302209 (Clockwise)

Preceding gene: 118478727

Following gene: 118478730

Centisome position: 62.81

GC content: 34.52

Gene sequence:

>336_bases
TTGATGAATGGAGAGGTTTATATGAAATTAAAAGACAAAGTAGCAATCATAACTGGTGGTGCAAGTGGAATTGGCGAATC
TACTGTTCGTCTTTTTATCGAAGAAGGTGCAAAAGTAGTTATTGCTGACTTTTCTGAACATGGAAAAGAACTATCAGATG
AATTGAATGCACATGGATATAATACGTTATTTATTAAAACTGATGTAACAAAAGAAGCAGATATTAAACAGCTAATTCAT
GAGACAGTAAGTACATACGGTAAATTAGATATTATGTATGCCAATGCCGGCGTTGCTGATGATGCACCGGCAAACGAATT
ATCCTATGAAAAGTGA

Upstream 100 bases:

>100_bases
GGGCTTTTACGATTAAGTAAACGCGAGCTTTTTCTTCTATCTACTTACTATTTAAGGTTGATAGTTTAATAACAAGATTT
AAAAATTCGACTTAAATTCA

Downstream 100 bases:

>100_bases
AAAAGAACTATTGATATTAATTTGTCTGGGGTATTCCTTTCTAATAAATATTCGATTGAACAATTTCTTAAACAAGGTAC
AGGTGGTGTCATCGTTAACG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: GLCDH-II [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MMNGEVYMKLKDKVAIITGGASGIGESTVRLFIEEGAKVVIADFSEHGKELSDELNAHGYNTLFIKTDVTKEADIKQLIH
ETVSTYGKLDIMYANAGVADDAPANELSYEK

Sequences:

>Translated_111_residues
MMNGEVYMKLKDKVAIITGGASGIGESTVRLFIEEGAKVVIADFSEHGKELSDELNAHGYNTLFIKTDVTKEADIKQLIH
ETVSTYGKLDIMYANAGVADDAPANELSYEK
>Mature_111_residues
MMNGEVYMKLKDKVAIITGGASGIGESTVRLFIEEGAKVVIADFSEHGKELSDELNAHGYNTLFIKTDVTKEADIKQLIH
ETVSTYGKLDIMYANAGVADDAPANELSYEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Escherichia coli, GI87082100, Length=91, Percent_Identity=36.2637362637363, Blast_Score=64, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=106, Percent_Identity=39.622641509434, Blast_Score=65, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=93, Percent_Identity=41.9354838709677, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=93, Percent_Identity=35.4838709677419, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI17737361, Length=91, Percent_Identity=36.2637362637363, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571526, Length=104, Percent_Identity=36.5384615384615, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.47 [H]

Molecular weight: Translated: 12086; Mature: 12086

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNGEVYMKLKDKVAIITGGASGIGESTVRLFIEEGAKVVIADFSEHGKELSDELNAHGY
CCCCEEEEEEECEEEEEECCCCCCCCHHEEEEEECCCEEEEEECHHCCHHHHHHHCCCCC
NTLFIKTDVTKEADIKQLIHETVSTYGKLDIMYANAGVADDAPANELSYEK
EEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMNGEVYMKLKDKVAIITGGASGIGESTVRLFIEEGAKVVIADFSEHGKELSDELNAHGY
CCCCEEEEEEECEEEEEECCCCCCCCHHEEEEEECCCEEEEEECHHCCHHHHHHHCCCCC
NTLFIKTDVTKEADIKQLIHETVSTYGKLDIMYANAGVADDAPANELSYEK
EEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA